Classification of Human Transcription Factors
- All Levels - |
| October 05, 2018 |
This classification is subject to occasional changes, as new insights to transcription factors and their structures appear. A working version with some recent changes that are subject to discussion may be found here.
A more extended version with a more flexible visualization and covering other mammalian TFs has been made available using Jürgen Dönitz' OBA server (click here). Moreover, it is also accessible in and used by the geneXplain platform. Also available is the classification of the orthologous murine TFs.
Symbols / links:
 : TRANSFAC® class descriptions;  : new class descriptions;  : additional information about the class and its members (see below);
 : Link to UniProt;  ,  : links to Protein Atlas, to items without / with antibody characterization, resp.
 : TRANSFAC accession numbers, mostly linked to TRANSFAC Professional (license required);  provides a link to a HumanPSD entry that has no TRANSFAC accession yet.
 : Reviewed UniProt entry of the corresponding mouse orthologs (Genus level only)
 :Non-reviewed UniProt entry of the corresponding mouse orthologs (Genus level only)
 : Reviewed UniProt entries of the corresponding rat orthologs (Genus level only)
 : Non-reviewed UniProt entries of the corresponding rat orthologs (Genus level only)
 : Link to PDB; preferably to a complex of the corresponding DNA-binding domain (DBD) with DNA, provisionally the DBD alone, referring to the human or a mammalian ortholog; for a few exceptions, illustrative structures of fungal homologs are linked.
Additional information:
The question mark in the Class title line links to the class description, the sequences of the manually adjusted DNA-binding domains of this respective class and their alignments, logo plots and, whenever relevant, further information like dimerization matrices etc.
DNA sequence patterns:
The DNA sequences assigned to many families or subfamilies represent typical or proven individual binding sequences for (some of) the domains in the respective taxon. They should not be taken as a consensus, and they are not suitable for predicting potential TF binding sites.
The logo plots after many TF genera have been derived from the profile library published by the group of J. Taipale at Karolinska Institute (Jolma et al., Cell 152, 327-339 (2013); PubMed 23332764) and were kindly provided by P. Stegmaier (geneXplain GmbH). Each of these plots is linked to an htm file with all matrices for this factor, human and mouse, that were given by Jolma et al., one of them being selected for the logo plot. The individual matrices are given a unique ID, comprising the gene symbol of the factor and an alphanumeric specification of the respective matrix, which may be either a consecutive number, or may have an additional "m" to indicate monomeric factor binding mode, "d" for dimers, or "dd" for dimers of dimers bound to the respective sequence patterns. For further explanation of the information provided with each matrix, kindly refer to the original publication.
Citation:
Wingender, E., Schoeps, T. and Dönitz, J.: TFClass: An expandable hierarchical classification of human transcription factors. Nucleic Acids Res. 41, D165-D170 (2013). doi: 10.1093/nar/gks1123 (Link)
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| Display detail:
All levels |
Superclasses |
Classes |
Families |
Subfamilies |
Genera
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| 1 |
Superclass: Basic domains |
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1.1 |
Class: Basic leucine zipper factors (bZIP) |
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1.1.1 |
Family: Jun-related factors |
TGAGTCA |
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1.1.1.1 |
Subfamily: Jun factors |
TGAGTCA |
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1.1.1.1.1 |
c-Jun |
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1.1.1.1.2 |
JunB |
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1.1.1.1.3 |
JunD |
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1.1.1.2 |
Subfamily: NF-E2-like factors |
GCTGAGTCA |
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1.1.1.2.1 |
NF-E2 p45 |
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1.1.1.2.2 |
NF-E2L1 (NRF1) |
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1.1.1.2.2.1 |
NF-E2L1, isoform 1 |
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1.1.1.2.2.2 |
NF-E2L1, isoform 2 |
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1.1.1.2.3 |
NF-E2L2 (NRF2) |
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1.1.1.2.3.1 |
NF-E2L2, isoform 1 |
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1.1.1.2.3.2 |
NF-E2L2, isoform 2 |
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1.1.1.2.3.3 |
NF-E2L2, isoform 3 |
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1.1.1.2.4 |
NF-E2L3 (NRF3) |
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1.1.1.2.5 |
BACH1 |
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1.1.1.2.6 |
BACH2 |
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1.1.1.3 |
Subfamily: ATF-2-like factors |
TGACGTCA |
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1.1.1.3.1 |
ATF-2 |
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1.1.1.3.1.1 |
ATF-2, isoform 1 |
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1.1.1.3.1.2 |
ATF-2, isoform 2 |
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1.1.1.3.1.3 |
ATF-2, isoform 3 |
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1.1.1.3.1.4 |
ATF-2, isoform 4 |
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1.1.1.3.1.5 |
ATF-2, isoform 5 |
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1.1.1.3.1.6 |
ATF-2, isoform 6 |
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1.1.1.3.1.7 |
ATF-2, isoform 7 |
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1.1.1.3.1.8 |
ATF-2, isoform 8 (ATF2-small) |
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1.1.1.3.2 |
ATF-7 |
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1.1.1.3.2.1 |
ATF-A, isoform 1 |
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1.1.1.3.2.2 |
ATF-Aδ, isoform 2 |
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1.1.1.3.2.3 |
ATF-A1, isoform 3 |
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1.1.1.3.2.4 |
ATF-7A0, isoform 4 |
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1.1.1.3.2.5 |
ATF-7 (ATF-4), isoform 5 |
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1.1.1.3.2.6 |
ATF-7, isoform 6 |
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1.1.1.3.3 |
CREB-5 (CRE-BPa) |
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1.1.1.3.3.1 |
CREB-5α, isoform 1 |
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1.1.1.3.3.2 |
CREB-5β, isoform 2 |
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1.1.1.3.3.3 |
CREB-5γ, isoform 3 |
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1.1.1.3.3.4 |
CREB-5δ, isoform 4 |
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1.1.2 |
Family: Fos-related factors |
(TGAGTCA) |
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1.1.2.1 |
Subfamily: Fos factors |
(TGAGTCA) |
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1.1.2.1.1 |
c-Fos |
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1.1.2.1.1.1 |
c-Fos, isoform 1 |
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1.1.2.1.1.2 |
c-Fos, isoform 2 |
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1.1.2.1.1.3 |
c-Fos, isoform 3 |
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1.1.2.1.2 |
FosB |
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1.1.2.1.2.1 |
FosB, isoform 1 |
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1.1.2.1.2.2 |
FosB, isoform 2 |
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1.1.2.1.2.3 |
FosB, isoform 3 |
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1.1.2.1.2.4 |
FosB, isoform 4 |
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1.1.2.1.2.5 |
FosB, isoform 5 |
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1.1.2.1.2.6 |
FosB, isoform 6 |
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1.1.2.1.2.7 |
FosB, isoform 7 |
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1.1.2.1.2.8 |
FosB, isoform 8 |
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1.1.2.1.2.9 |
FosB, isoform 9 |
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1.1.2.1.2.10 |
FosB, isoform 10 |
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1.1.2.1.3 |
Fra-1 (FosL1) |
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1.1.2.1.3.1 |
Fra-1, isoform 1 |
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1.1.2.1.3.2 |
Fra-1, isoform 2 |
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1.1.2.1.4 |
Fra-2 (FosL2) |
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1.1.2.1.4.1 |
Fra-2, isoform 1 |
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1.1.2.1.4.2 |
Fra-2, isoform 2 |
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1.1.2.1.4.3 |
Fra-2, isoform 3 |
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1.1.2.2 |
Subfamily: ATF-3-like factors |
TGACGTCA |
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1.1.2.2.1 |
ATF-3 |
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1.1.2.2.1.1 |
ATF-3, isoform 1 |
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1.1.2.2.1.2 |
ATF-3ΔZIP, isoform 2 |
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1.1.2.2.1.3 |
ATF-3ΔZIP2a / ATF-3ΔZIP2b, isoform 3 |
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1.1.2.2.1.4 |
ATF-3ΔZIP2c, isoform 4 |
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1.1.2.2.1.5 |
ATF-3, isoform 5 |
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1.1.2.2.2 |
JDP-2 |
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1.1.2.2.2.1 |
JDP-2, isoform 1 |
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1.1.2.2.2.2 |
JDP-2, isoform 2 |
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1.1.3 |
Family: Maf-related factors |
TGCTGACTCAGCA |
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1.1.3.1 |
Subfamily: Large Maf factors |
TGCTGACTCAGCA |
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1.1.3.1.1 |
c-Maf |
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1.1.3.1.1.1 |
c-Maf, isoform 1 |
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1.1.3.1.1.2 |
c-Maf, isoform 2 |
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1.1.3.1.2 |
MafA |
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1.1.3.1.3 |
MafB |
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1.1.3.1.4 |
Nrl |
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1.1.3.1.4.1 |
Nrl, isoform 1 |
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1.1.3.1.4.2 |
Nrl, isoform 2 |
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1.1.3.2 |
Subfamily: Small Maf factors |
TGCTGACTCAGCA |
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1.1.3.2.1 |
MafF |
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1.1.3.2.1.1 |
MafF, isoform 1 |
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1.1.3.2.1.2 |
MafF, isoform 2 |
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1.1.3.2.2 |
MafG |
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1.1.3.2.3 |
MafK |
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1.1.4 |
Family: B-ATF-related factors |
TGAGTCA |
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1.1.4.0.1 |
B-ATF |
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1.1.4.0.2 |
B-ATF-2 |
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1.1.4.0.2.1 |
B-ATF-2, isoform 1 |
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1.1.4.0.2.2 |
B-ATF-2, isoform 2 |
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1.1.4.0.3 |
B-ATF-3 |
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1.1.5 |
Family: XBP-1-related factors |
GGATGACGTGTACA |
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1.1.5.0.1 |
XBP-1 |
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1.1.5.0.1.1 |
XBP-1U |
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1.1.5.0.1.2 |
XBP-1S |
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1.1.6 |
Family: ATF-4-related factors |
TGACGTCA |
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1.1.6.0.1 |
ATF-4 |
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1.1.6.0.2 |
ATF-5 |
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1.1.7 |
Family: CREB-related factors |
TGACGTCA |
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1.1.7.1 |
Subfamily: CREB-like factors |
TGACGTCA |
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1.1.7.1.1 |
CREB (CREB1) |
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1.1.7.1.1.1 |
CREB-A |
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1.1.7.1.1.2 |
CREB-B |
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1.1.7.1.1.3 |
htCREB, isoform 3 |
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1.1.7.1.2 |
ATF-1 |
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1.1.7.1.2.1 |
ATF-1, isoform 1 |
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1.1.7.1.2.2 |
ATF-1, isoform 2 |
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1.1.7.1.3 |
CREM |
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1.1.7.1.3.1 |
CREM, isoform 1 (CREM-BCEFGγHIβ |
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1.1.7.1.3.2 |
CREM-β, isoform 2 (CREM-BCEFGHIβ) |
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1.1.7.1.3.3 |
CREM-τ, isoform 3 (CREM-BCEFGIα) |
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1.1.7.1.3.4 |
CREM-γ, isoform 4 (CREM-BEFHIb) |
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1.1.7.1.3.5 |
CREM-ϑ2τ-γ, isoform 5 (CREM-ϑ2EFGHIb) |
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1.1.7.1.3.6 |
ICER-I, isoform 6 (IcerγHIα) |
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1.1.7.1.3.7 |
ICER-Iγ, isoform 7 (IcerHIα) |
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1.1.7.1.3.8 |
ICER-II, isoform 8 (IcerγHIβ) |
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1.1.7.1.3.9 |
ICER-IIγ, isoform 9 (IcerHIβ) |
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1.1.7.1.3.10 |
CREM-ϑ1τ2β, isoform 10 (CREM-ϑ1EFGHIβ) |
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1.1.7.1.3.11 |
CREM-ϑ1β, isoform 11 (CREM-ϑ1EFHIβ) |
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1.1.7.1.3.12 |
CREM-ϑ2β, isoform 12 (CREM-ϑ2EFHIb) |
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1.1.7.1.3.13 |
CREM, isoform 13 (CREM-BEFGγHIβ) |
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1.1.7.1.3.14 |
CREM-τ2γ, isoform 14 (CREM-BEFGHIβ) |
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1.1.7.1.3.15 |
CREM, isoform 15 (CREM-BGHIβ) |
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1.1.7.1.3.16 |
CREM-ΔC-G, isoform 16 (CREM-BγHIβ) |
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1.1.7.1.3.17 |
CREM, isoform 17 (CREM-BHIβ) |
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1.1.7.1.3.18 |
CREM, isoform 18 (CREM-BHIα) |
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1.1.7.1.3.19 |
CREM-ϑ1τ2γ, isoform 19 (CREM-ϑ1EFGγHIβ) |
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1.1.7.1.3.20 |
CREM, isoform 20 |
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1.1.7.1.3.21 |
CREM, isoform 21 |
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1.1.7.1.3.22 |
CREM, isoform 22 |
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1.1.7.1.3.23 |
CREM, isoform 23 |
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1.1.7.1.3.24 |
CREM, isoform 24 |
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1.1.7.1.3.25 |
CREM, isoform 25 |
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1.1.7.1.3.26 |
CREM, isoform 26 |
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1.1.7.1.3.27 |
CREM, isoform 27 |
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1.1.7.1.3.28 |
CREM, isoform 28 |
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1.1.7.1.3.29 |
CREM, isoform 29 |
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1.1.7.2 |
Subfamily: CREB-3-like factors |
TGACGTCA |
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1.1.7.2.1 |
CREB-3 (Luman) |
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F |
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1.1.7.2.1.1 |
CREB-3, isoform 1 |
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1.1.7.2.1.2 |
LZIP, isoform 2 (UP: isof. 1) |
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1.1.7.2.1.3 |
sLZIP, isoform 3 (UP: isof. 2) |
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1.1.7.2.2 |
CREB-3L1 (OASIS) |
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1.1.7.2.2.1 |
CREB-3L1, isoform 1 |
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1.1.7.2.2.2 |
CREB-3L1, isoform 2 |
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1.1.7.2.3 |
CREB-3L2 |
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1.1.7.2.3.1 |
CREB-3L2, isoform 1 |
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1.1.7.2.3.2 |
CREB-3L2, isoform 2 |
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1.1.7.2.3.3 |
CREB-3L2, isoform 3 |
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1.1.7.2.4 |
CREB-3L3 (CREB-H) |
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1.1.7.2.4.1 |
CREB-3L3, isoform 1 |
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1.1.7.2.4.2 |
CREB-3L3, isoform 2 |
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1.1.7.2.4.3 |
CREB-3L3, isoform 3 |
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1.1.7.2.4.4 |
CREB-3L3, isoform 4 |
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1.1.7.2.5 |
CREB-3L4 |
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1.1.7.2.5.1 |
CREB-3L4, isoform 1 |
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1.1.7.2.5.2 |
CREB-3L4, isoform 2 |
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1.1.7.3 |
Subfamily: ATF-6 factors |
TGACGTGG |
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1.1.7.3.1 |
ATF-6α |
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1.1.7.3.2 |
ATF-6β |
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1.1.7.3.2.1 |
ATF-6β, isoform 1 |
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1.1.7.3.2.2 |
ATF-6β, isoform 2 |
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|
|
| |
1.1.7.4 |
Subfamily: CREBZF-like factors |
TGACGTCA |
|
| |
1.1.7.4.1 |
CREBZF (Zhangfei, ZF) |
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|
| |
1.1.7.5 |
Subfamily: CREBL2-like factors |
TGACGTCA |
|
| |
1.1.7.5.1 |
CREBL2 |
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|
| |
1.1.8 |
Family: C/EBP-related |
ATTGCGCAAT |
|
| |
1.1.8.1 |
Subfamily: C/EBP |
ATTGCGCAAT |
|
| |
1.1.8.1.1 |
C/EBPα |
|
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|
|
|
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|
| |
1.1.8.1.1.1 |
C/EBPα, isoform 1 |
|
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|
| |
1.1.8.1.1.2 |
C/EBPα, isoform 2 |
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| |
1.1.8.1.1.3 |
C/EBPα, isoform 3 |
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|
| |
1.1.8.1.1.4 |
C/EBPα, isoform 4 |
|
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| |
1.1.8.1.2 |
C/EBPβ (NF-IL6-1) |
 |
|
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|
| |
1.1.8.1.2.1 |
C/EBPβ, isoform 1 (C/EBPβ-FL) |
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|
| |
1.1.8.1.2.2 |
C/EBPβ, isoform 2 (C/EBPβ-LAP) |
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|
| |
1.1.8.1.2.3 |
C/EBPβ, isoform 3 (C/EBPβ-LIP) |
|
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|
| |
1.1.8.1.3 |
C/EBPγ |
 |
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| |
1.1.8.1.4 |
C/EBPδ |
 |
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| |
1.1.8.1.5 |
C/EBPε |
 |
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| |
1.1.8.1.6 |
DDIT3 (CHOP-10) |
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| |
1.1.8.1.6.1 |
DDIT3, isoform 1 |
|
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| |
1.1.8.1.6.2 |
DDIT3, isoform 2 |
|
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|
| |
1.1.8.2 |
Subfamily: PAR factors |
TTATGCAA |
|
| |
1.1.8.2.1 |
DBP |
 |
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|
| |
1.1.8.2.2 |
HLF |
 |
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|
| |
1.1.8.2.2.1 |
HLF, isoform 1 |
|
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|
| |
1.1.8.2.2.2 |
HLF, isoform 2 |
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|
| |
1.1.8.2.3 |
TEF |
 |
|
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|
| |
1.1.8.2.3.1 |
TEF, isoform 1 |
|
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|
|
| |
1.1.8.2.3.2 |
TEF, isoform 2 |
|
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|
|
| |
1.1.8.2.4 |
NF-IL3 (E4BP4) |
 |
|
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|
| |
1.1.8.3 |
Subfamily: CREBRF-like factors |
|
|
| |
1.1.8.3.1 |
CREBRF |
|
|
|
|
|
|
|
| |
1.1.8.3.1.1 |
CREBRF, isoform 1 |
|
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|
| |
1.1.8.3.1.2 |
CREBRF, isoform 1 |
|
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|
|
| |
1.1.8.3.1.3 |
CREBRF, isoform 1 |
|
|
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|
| |
1.1.0 |
Family: ZIP only |
|
|
| |
1.1.0.1 |
Subfamily: TSC22 |
|
|
| |
1.1.0.1.1 |
TSC22D1 (TSC-22, Cerebral protein 2) |
|
|
|
|
|
|
|
| |
1.1.0.1.1.1 |
TSC22D1, isoform 1 |
|
|
|
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|
| |
1.1.0.1.1.2 |
TSC22D1, isoform 2 |
|
|
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|
| |
1.1.0.1.1.3 |
TSC22D1, isoform 3 |
|
|
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|
| |
1.1.0.1.1.4 |
TSC22D1, isoform 4 |
|
|
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|
| |
1.1.0.1.2 |
TSC22D2 (TILZ4) |
|
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|
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|
| |
1.1.0.1.2.1 |
TSC22D2, isoform 1 (TILZ4a, TILZ4c) |
|
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|
| |
1.1.0.1.2.2 |
TSC22D2, isoform 2 (TILZ4b) |
|
|
|
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|
| |
1.1.0.1.3 |
TSC22D3 (DSIPI, GILZ) |
|
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|
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|
| |
1.1.0.1.3.1 |
TSC22D3, isoform 1 |
|
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|
| |
1.1.0.1.3.2 |
TSC22D3, isoform 2 |
|
|
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|
| |
1.1.0.1.3.3 |
TSC22D3, isoform 3 |
|
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|
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|
| |
1.1.0.1.4 |
TSC22D4 (TILZ2) |
|
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|
| |
1.1.0.1.4.1 |
TSC22D4, isoform 1 |
|
|
|
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|
| |
1.1.0.1.4.2 |
TSC22D4, isoform 2 |
|
|
|
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|
| |
1.1.0.2 |
Subfamily: UTF |
|
|
| |
1.1.0.2.1 |
UTF1 |
|
|
|
|
|
|
|
| |
1.2 |
Class: Basic helix-loop-helix factors (bHLH) |
|
|
|
| |
1.2.1 |
Family: E2A-related factors |
CAGGTG |
|
| |
1.2.1.0.1 |
E2A (TCF-3, ITF-1) |
 |
|
|
|
|
|
|
| |
1.2.1.0.1.1 |
E12 (PAN-2) |
|
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|
| |
1.2.1.0.1.2 |
E47 (PAN-1) |
|
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|
| |
1.2.1.0.1.3 |
ITF-1 |
|
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|
| |
1.2.1.0.2 |
SEF2 (E2-2, TCF-4, ITF-2) |
 |
|
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|
| |
1.2.1.0.2.1 |
SEF2-1B (B−) |
|
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|
| |
1.2.1.0.2.2 |
SEF2-1A (A+) |
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|
| |
1.2.1.0.2.3 |
SEF2-1D (B+) |
|
|
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|
| |
1.2.1.0.2.4 |
SEF2, isoform B+δ |
|
|
|
|
|
| |
1.2.1.0.2.5 |
SEF2, isoform B−δ |
|
|
|
|
|
| |
1.2.1.0.2.6 |
SEF2, isoform A− |
|
|
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|
| |
1.2.1.0.2.7 |
SEF2, isoform G− |
|
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|
| |
1.2.1.0.2.8 |
SEF2, isoform H− |
|
|
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|
| |
1.2.1.0.2.9 |
SEF2, isoform D− |
|
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|
| |
1.2.1.0.2.10 |
SEF2, isoform F− |
|
|
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|
| |
1.2.1.0.2.11 |
SEF2, isoform 11 |
|
|
|
|
|
| |
1.2.1.0.2.12 |
SEF2, isoform E− |
|
|
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|
|
| |
1.2.1.0.2.13 |
SEF2, isoform 13 |
|
|
|
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|
| |
1.2.1.0.2.14 |
SEF2, isoform C− |
|
|
|
|
|
| |
1.2.1.0.2.15 |
SEF2, isoform C−δ |
|
|
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|
| |
1.2.1.0.2.16 |
SEF2, isoform I− |
|
|
|
|
|
| |
1.2.1.0.3 |
HTF-4 (TCF-12, HEB) |
|
|
|
|
|
|
|
| |
1.2.1.0.3.1 |
HTF-4a, isoform 1 |
|
|
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|
| |
1.2.1.0.3.2 |
HTF-4b, isoform 2 |
|
|
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|
| |
1.2.1.0.3.3 |
HTF-4c, isoform 3 |
|
|
|
|
|
| |
1.2.1.0.3.4 |
HTF-4c, isoform 4 |
|
|
|
|
|
| |
1.2.2 |
Family: MyoD / ASC-related factors |
CAGGTG |
|
| |
1.2.2.1 |
Subfamily: Myogenic transcription factors |
|
|
| |
1.2.2.1.1 |
MyoD |
|
|
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|
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|
| |
1.2.2.1.2 |
Myogenin (Myf-4) |
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|
| |
1.2.2.1.3 |
Myf-5 |
|
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|
| |
1.2.2.1.4 |
Myf-6 (MRF4) |
 |
|
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|
| |
1.2.2.2 |
Subfamily: Achaete-Scute-like factors |
|
|
| |
1.2.2.2.1 |
ASH-1 (ASCL1) |
|
|
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|
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|
| |
1.2.2.2.2 |
ASH-2 (ASCL2) |
 |
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|
| |
1.2.2.2.3 |
ASH-3 (ASCL3) |
|
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|
| |
1.2.2.2.4 |
ASH-4 (ASCL4) |
|
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|
| |
1.2.2.2.5 |
ASH-5 (ASCL5) |
|
|
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|
|
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|
| |
1.2.3 |
Family: Tal-related factors |
CAGCTG |
|
| |
1.2.3.1 |
Subfamily: Tal / HEN-like factors |
CAGCTG |
|
| |
1.2.3.1.1 |
Tal-1 (SCL, TCL-5) |
|
|
|
|
|
|
|
| |
1.2.3.1.1.1 |
PP42-Tal-1 |
|
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|
| |
1.2.3.1.1.2 |
PP39-Tal-1 |
|
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|
| |
1.2.3.1.1.3 |
PP22-Tal-1 |
|
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|
| |
1.2.3.1.2 |
Tal-2 |
|
|
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|
| |
1.2.3.1.3 |
Lyl-1 |
|
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|
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|
| |
1.2.3.1.4 |
HEN1 (NSCL-1, NHLH1) |
 |
|
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|
| |
1.2.3.1.5 |
HEN2 (NSCL-2, NHLH2) |
|
|
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|
| |
1.2.3.2 |
Subfamily: Twist-like factors |
CGTCTG |
|
| |
1.2.3.2.1 |
Twist-1 (H-Twist, M-Twist) |
|
|
|
|
|
|
|
| |
1.2.3.2.2 |
Twist-2 (Dermo-1) |
|
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|
| |
1.2.3.2.3 |
HAND-1 (eHAND, Th1) |
|
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|
| |
1.2.3.2.4 |
HAND-2 (dHAND) |
|
|
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|
|
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|
| |
1.2.3.2.4.1 |
HAND-2, isoform 1 |
|
|
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|
| |
1.2.3.2.4.2 |
HAND-2, isoform 2 |
|
|
|
|
|
| |
1.2.3.2.5 |
bHLH-EC2 (TCF-15) |
|
|
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|
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|
| |
1.2.3.2.6 |
Scx |
|
|
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|
| |
1.2.3.2.7 |
PTF-1a |
|
|
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|
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|
| |
1.2.3.2.8 |
FIGα |
 |
|
|
|
|
|
|
| |
1.2.3.3 |
Subfamily: Mesp-like factors |
|
|
| |
1.2.3.3.1 |
Mesp-1 |
 |
|
|
|
|
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|
| |
1.2.3.3.2 |
Mesp-2 |
|
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|
| |
1.2.3.3.3 |
TCF-23 |
|
|
|
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|
| |
1.2.3.3.4 |
ABF-1 (Musculin, MyoR, MSC) |
 |
|
|
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|
| |
1.2.3.3.5 |
Pod-1 (TCF-21) |
 |
|
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|
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|
| |
1.2.3.3.6 |
Mesogenin-1 (MSGN1) |
|
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|
| |
1.2.3.3.7 |
TCF-24 |
|
|
|
|
|
|
|
| |
1.2.3.4 |
Subfamily: Neurogenin / Atonal-like factors |
CAGCTG |
|
| |
1.2.3.4.1 |
NeuroD1 |
|
|
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|
|
|
|
| |
1.2.3.4.2 |
NeuroD2 |
 |
|
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|
| |
1.2.3.4.3 |
NeuroD4 (ATH-3) |
|
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|
| |
1.2.3.4.4 |
NeuroD6 (ATH-2) |
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|
| |
1.2.3.4.5 |
NGN-1 (NeuroD3) |
|
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|
| |
1.2.3.4.6 |
NGN-2 (Atoh4, NeuroG2) |
 |
|
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|
| |
1.2.3.4.7 |
NGN-3 (Atoh5, NeuroG3) |
|
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|
| |
1.2.3.4.8 |
ATH-1 (ATOH-1) |
 |
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|
| |
1.2.3.4.9 |
ATH-5 (ATOH-7) |
|
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|
| |
1.2.3.4.10 |
ATH-6 (ATOH-8) |
|
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|
|
|
|
| |
1.2.3.4.10.1 |
ATH-6, isoform 1 |
|
|
|
|
|
| |
1.2.3.4.10.2 |
ATH-6, isoform 2 |
|
|
|
|
|
| |
1.2.3.4.11 |
bHLHe22 (Beta3) |
 |
|
|
|
|
|
|
| |
1.2.3.4.12 |
bHLHe23 |
 |
|
|
|
|
|
|
| |
1.2.3.4.13 |
OLIGO1 |
 |
|
|
|
|
|
|
| |
1.2.3.4.14 |
OLIGO2 |
 |
|
|
|
|
|
|
| |
1.2.3.4.15 |
OLIGO3 |
 |
|
|
|
|
|
|
| |
1.2.3.4.16 |
MIST1 (bHLHa15) |
 |
|
|
|
|
|
|
| |
1.2.3.4.17 |
Fer3L (Ferd3L) |
|
|
|
|
|
|
|
| |
1.2.3.5 |
Subfamily: bHLHa9-like factors |
|
|
| |
1.2.3.5.1 |
bHLHa9 |
|
|
|
|
|
|
|
| |
1.2.4 |
Family: Hairy-related factors |
CACGAG |
|
| |
1.2.4.1 |
Subfamily: Hairy-like factors |
CACGAG |
|
| |
1.2.4.1.1 |
HES-1 |
|
|
|
|
|
|
|
| |
1.2.4.1.2 |
HES-2 |
|
|
|
|
|
|
|
| |
1.2.4.1.2.1 |
HES-2, isoform 1 |
|
|
|
|
|
| |
1.2.4.1.2.2 |
HES-2, isoform 2 |
|
|
|
|
|
| |
1.2.4.1.3 |
HES-3 |
|
|
|
|
|
|
|
| |
1.2.4.1.4 |
HES-4 |
|
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|
| |
1.2.4.1.5 |
HES-5 |
 |
|
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|
| |
1.2.4.1.6 |
HES-6 |
|
|
|
|
|
|
|
| |
1.2.4.1.6.1 |
HES-6, isoform 1 |
|
|
|
|
|
| |
1.2.4.1.6.2 |
HES-6, isoform 2 |
|
|
|
|
|
| |
1.2.4.1.6.3 |
HES-6, isoform 3 |
|
|
|
|
|
| |
1.2.4.1.6.4 |
HES-6, isoform 4 |
|
|
|
|
|
| |
1.2.4.1.7 |
HES-7 |
|
|
|
|
|
|
|
| |
1.2.4.1.7.1 |
HES-7, isoform 1 |
|
|
|
|
|
| |
1.2.4.1.7.2 |
HES-7, isoform 2 |
|
|
|
|
|
| |
1.2.4.1.8 |
HEY-1 |
 |
|
|
|
|
|
|
| |
1.2.4.1.8.1 |
HEY-1, isoform 1 |
|
|
|
|
|
| |
1.2.4.1.8.2 |
HEY-1, isoform 2 |
|
|
|
|
|
| |
1.2.4.1.9 |
HEY-2 |
 |
|
|
|
|
|
|
| |
1.2.4.1.10 |
HEYL |
|
|
|
|
|
|
|
| |
1.2.4.1.11 |
HELT |
|
|
|
|
|
|
|
| |
1.2.4.1.11.1 |
HELT, isoform 1 |
|
|
|
|
|
| |
1.2.4.1.11.2 |
HELT, isoform 2 |
|
|
|
|
|
| |
1.2.4.1.12 |
DEC1 (STRA-13, bHLHb2, bHLHe40) |
 |
|
|
|
|
|
|
| |
1.2.4.1.13 |
DEC2 (bHLHb3, bHLHe41) |
 |
|
|
|
|
|
|
| |
1.2.5 |
Family: PAS domain factors |
CACGC |
|
| |
1.2.5.1 |
Subfamily: Ahr-like factors |
CACGC |
|
| |
1.2.5.1.1 |
AhR |
|
|
|
|
|
|
|
| |
1.2.5.1.2 |
AhRR |
|
|
|
|
|
|
|
| |
1.2.5.1.2.1 |
AhRR, isoform 1 |
|
|
|
|
|
| |
1.2.5.1.2.2 |
AhRR, isoform 2 |
|
|
|
|
|
| |
1.2.5.1.2.3 |
AhRR, isoform 3 |
|
|
|
|
|
| |
1.2.5.1.3 |
SIM1 |
|
|
|
|
|
|
|
| |
1.2.5.1.4 |
SIM2 |
|
|
|
|
|
|
|
| |
1.2.5.1.4.1 |
SIM2, isoform 1 |
|
|
|
|
|
| |
1.2.5.1.4.2 |
SIM2, isoform 2 |
|
|
|
|
|
| |
1.2.5.1.5 |
HIF-1α |
|
|
|
|
|
|
|
| |
1.2.5.1.5.1 |
HIF-1α, isoform 1 |
|
|
|
|
|
| |
1.2.5.1.5.2 |
HIF-1α, isoform 2 |
|
|
|
|
|
| |
1.2.5.1.5.3 |
HIF-1α, isoform 3 (I.3) |
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| |
1.2.5.1.6 |
HIF-3α |
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|
| |
1.2.5.1.6.1 |
HIF-3α, isoform 1 |
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| |
1.2.5.1.6.2 |
HIF-3α, isoform 2 |
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| |
1.2.5.1.6.3 |
HIF-3α, isoform 3 |
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| |
1.2.5.1.6.4 |
HIF-3α, isoform 4 |
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| |
1.2.5.1.6.5 |
HIF-3α, isoform 5 |
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| |
1.2.5.1.6.6 |
HIF-3α, isoform 6 |
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| |
1.2.5.1.6.7 |
HIF-3α, isoform 7 |
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| |
1.2.5.1.7 |
EPAS-1 |
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| |
1.2.5.1.8 |
NPAS-1 |
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|
| |
1.2.5.1.8.1 |
NPAS-1, isoform 1 |
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| |
1.2.5.1.8.2 |
NPAS-1, isoform 2 |
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| |
1.2.5.1.9 |
NPAS-3 |
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F |
|
| |
1.2.5.1.9.1 |
NPAS-3, isoform 1 (long form) |
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| |
1.2.5.1.9.2 |
NPAS-3, isoform 2 |
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| |
1.2.5.1.9.3 |
NPAS-3, isoform 3 (NPAS3v) |
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| |
1.2.5.1.9.4 |
NPAS-3, isoform 4 |
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1.2.5.1.9.5 |
NPAS-3, isoform 5 |
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| |
1.2.5.1.9.6 |
NPAS-3, isoform 6 |
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| |
1.2.5.2 |
Subfamily: Arnt-like factors |
CACGTG |
|
| |
1.2.5.2.1 |
Arnt (HIF-1β) |
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| |
1.2.5.2.1.1 |
Arnt long, isoform 1 |
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| |
1.2.5.2.1.2 |
Arnt short, isoform 2 |
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| |
1.2.5.2.1.3 |
Arnt, isoform 3 |
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| |
1.2.5.2.1.4 |
Arnt, isoform 4 |
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| |
1.2.5.2.2 |
Arnt-2 |
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| |
1.2.5.2.2.1 |
Arnt-2, isoform 1 |
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| |
1.2.5.2.2.2 |
Arnt-2, isoform 2 |
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|
| |
1.2.5.2.3 |
ArntL (BMAL1) |
 |
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| |
1.2.5.2.3.1 |
BMAL1A |
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| |
1.2.5.2.3.2 |
BMAL1B |
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| |
1.2.5.2.3.3 |
BMAL1C |
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| |
1.2.5.2.3.4 |
BMAL1D |
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| |
1.2.5.2.3.5 |
BMAL1E |
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| |
1.2.5.2.3.6 |
BMAL1F |
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| |
1.2.5.2.3.7 |
MOP3 |
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| |
1.2.5.2.3.8 |
BMAL1 / ArntL isoform 8 |
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| |
1.2.5.2.3.9 |
BMAL1 / ArntL isoform 9 |
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|
| |
1.2.5.2.4 |
ArntL2 (BMAL2) |
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| |
1.2.5.2.4.1 |
BMAL2a |
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| |
1.2.5.2.4.2 |
BMAL2b |
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| |
1.2.5.2.4.3 |
BMAL2c |
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| |
1.2.5.2.4.4 |
BMAL2d |
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| |
1.2.5.2.4.5 |
CLIF, isoform 5 |
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| |
1.2.5.2.4.6 |
BMAL2, isoform 6 |
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| |
1.2.5.2.4.7 |
MOP9 long form, isoform 7 |
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| |
1.2.5.2.4.8 |
MOP9 short form, isoform 8 |
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| |
1.2.5.2.4.9 |
MOP9 short form, isoform 9 |
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| |
1.2.5.2.5 |
CLOCK |
 |
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| |
1.2.5.2.6 |
NPAS-2 |
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|
| |
1.2.5.3 |
Subfamily: NCoA factors |
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|
| |
1.2.5.3.1 |
NCoA-1 (SRC-1) |
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|
| |
1.2.5.3.1.1 |
SRC-1A |
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| |
1.2.5.3.1.2 |
SRC-1E |
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| |
1.2.5.3.1.3 |
SRC-1Q |
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| |
1.2.5.3.2 |
NCoA-2 |
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|
| |
1.2.5.3.3 |
NCoA-3 |
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|
| |
1.2.5.3.3.1 |
NCoA-3, isoform 1 |
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| |
1.2.5.3.3.2 |
NCoA-3, isoform 2 |
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| |
1.2.5.3.3.3 |
NCoA-3, isoform 3 |
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| |
1.2.5.3.3.4 |
NCoA-3, isoform 4 |
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| |
1.2.5.3.3.5 |
NCoA-3, isoform 5 |
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| |
1.2.5.4 |
Subfamily: NPAS-4 |
CACGA |
|
| |
1.2.5.4.1 |
NPAS-4 |
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|
| |
1.2.5.4.1.1 |
NPAS-4, isoform 1 |
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| |
1.2.5.4.1.2 |
NPAS-4, isoform 2 |
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|
| |
1.2.5.5 |
Subfamily: SOHLH-like factors |
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|
| |
1.2.5.5.1 |
SOHLH1 (TEB2) |
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|
| |
1.2.5.5.1.1 |
SOHLH1, isoform 1 |
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| |
1.2.5.5.1.2 |
SOHLH1, isoform 2 |
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|
| |
1.2.5.5.2 |
SOHLH2 (TEB1) |
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|
| |
1.2.5.5.2.1 |
SOHLH2, isoform 1 |
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| |
1.2.5.5.2.2 |
SOHLH2, isoform 2 |
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| |
1.2.5.5.2.3 |
SOHLH2, isoform 3 |
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|
| |
1.2.5.5.3 |
TCFL5 (Cha, E2BP-1) |
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|
F |
|
| |
1.2.5.5.3.1 |
TCFL5, isoform 1 |
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| |
1.2.5.5.3.2 |
TCFL5, isoform 2 |
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| |
1.2.5.5.3.3 |
TCFL5, isoform 3 |
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|
| |
1.2.6 |
Family: bHLH-ZIP factors |
CACATG |
|
| |
1.2.6.1 |
Subfamily: TFE3-like factors |
CACATG |
|
| |
1.2.6.1.1 |
TFE3 |
 |
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|
| |
1.2.6.1.1.1 |
TFE3, isoform 1 |
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| |
1.2.6.1.1.2 |
TFE3, isoform 2 |
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| |
1.2.6.1.2 |
TFEB |
 |
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| |
1.2.6.1.2.1 |
TFEB, isoform 1 |
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| |
1.2.6.1.2.2 |
TFEB, isoform 2 |
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| |
1.2.6.1.3 |
TFEC |
 |
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| |
1.2.6.1.3.1 |
TFEC, isoform 1 |
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| |
1.2.6.1.3.2 |
TFEC, isoform 2 |
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| |
1.2.6.1.3.3 |
TFEC, isoform 3 |
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| |
1.2.6.1.3.4 |
TFEC, isoform 4 |
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| |
1.2.6.1.4 |
MiTF |
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|
| |
1.2.6.1.4.1 |
MiTF, isoform A1 |
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| |
1.2.6.1.4.2 |
MiTF, isoform A2 |
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|
| |
1.2.6.1.4.3 |
MiTF, isoform B1 |
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| |
1.2.6.1.4.4 |
MiTF, isoform B2 |
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| |
1.2.6.1.4.5 |
MiTF, isoform C1 |
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| |
1.2.6.1.4.6 |
MiTF, isoform C2 |
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| |
1.2.6.1.4.7 |
MiTF, isoform H1 |
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| |
1.2.6.1.4.8 |
MiTF, isoform H2 |
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|
| |
1.2.6.1.4.9 |
MiTF, isoform M1 |
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| |
1.2.6.1.4.10 |
MiTF, isoform M2 |
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| |
1.2.6.1.4.11 |
MiTF, isoform Mdel |
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| |
1.2.6.1.4.12 |
MiTF, isoform 12 |
|
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|
| |
1.2.6.2 |
Subfamily: USF factors |
CACGTG |
|
| |
1.2.6.2.1 |
USF-1 |
 |
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|
| |
1.2.6.2.1.1 |
USF-1, isoform 1 |
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|
| |
1.2.6.2.1.2 |
USF-1, isoform 2 (usf1-bd) |
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|
| |
1.2.6.2.2 |
USF-2 |
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| |
1.2.6.2.2.1 |
USF-2A |
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| |
1.2.6.2.2.2 |
USF-2AΔH |
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| |
1.2.6.2.2.3 |
USF-2B |
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| |
1.2.6.2.2.4 |
USF-2C |
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| |
1.2.6.2.3 |
USF-3 |
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|
| |
1.2.6.2.3.1 |
USF-3, isoform 1 |
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| |
1.2.6.2.3.2 |
USF-3, isoform 2 |
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|
| |
1.2.6.3 |
Subfamily: SREBP factors |
ATCACCCCAC |
|
| |
1.2.6.3.1 |
SREBP-1 (SREBF1) |
 |
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|
| |
1.2.6.3.1.1 |
SREBP-1A |
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| |
1.2.6.3.1.2 |
SREBP-1B |
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| |
1.2.6.3.1.3 |
SREBP-1C |
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|
| |
1.2.6.3.1.4 |
SREBP-1, isoform 4 |
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| |
1.2.6.3.1.5 |
SREBP-1, isoform 5 (SREBP-1aΔ) |
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| |
1.2.6.3.1.6 |
SREBP-1, isoform 6 (SREBP-1cΔ) |
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| |
1.2.6.3.2 |
SREBP-2 (SREBF2) |
 |
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|
| |
1.2.6.3.2.1 |
SREBP-2, isoform 1 |
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| |
1.2.6.3.2.2 |
SREBP-2, isoform 2 |
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| |
1.2.6.4 |
Subfamily: AP-4 |
CAGCTG |
|
| |
1.2.6.4.1 |
AP-4 |
 |
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|
| |
1.2.6.5 |
Subfamily: Myc / Max factors |
CACGTG |
|
| |
1.2.6.5.1 |
c-Myc |
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|
| |
1.2.6.5.1.1 |
c-Myc, isoform 1 |
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| |
1.2.6.5.1.2 |
c-Myc, isoform 2 |
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| |
1.2.6.5.2 |
N-Myc |
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| |
1.2.6.5.3 |
L-Myc-1 |
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|
| |
1.2.6.5.3.1 |
L-Myc-1, isoform 1 |
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| |
1.2.6.5.3.2 |
L-Myc-1, isoform 2 (Short) |
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| |
1.2.6.5.3.3 |
L-Myc-1, isoform 3 |
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| |
1.2.6.5.4 |
L-Myc-2 (MYCLP1) |
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| |
1.2.6.5.5 |
Max |
 |
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| |
1.2.6.5.5.1 |
Max Long, isoform 1 |
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| |
1.2.6.5.5.2 |
Max Short, isoform 2 |
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| |
1.2.6.5.5.3 |
ΔMax, isoform 3 |
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| |
1.2.6.5.5.4 |
Max, isoform 4 |
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| |
1.2.6.5.5.5 |
Max, isoform 5 |
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| |
1.2.6.5.5.6 |
Max, isoform 6 |
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|
| |
1.2.6.6 |
Subfamily: Mondo-like factors |
CACGTG |
|
| |
1.2.6.6.1 |
Mlx |
 |
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| |
1.2.6.6.1.1 |
Mlxα |
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| |
1.2.6.6.1.2 |
Mlxβ |
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| |
1.2.6.6.1.3 |
Mlxγ |
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|
| |
1.2.6.6.2 |
MondoA (Mlx-IP) |
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|
| |
1.2.6.6.2.1 |
Mlx-IP, isoform 1 |
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| |
1.2.6.6.2.2 |
Mlx-IP, isoform 2 |
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| |
1.2.6.6.2.3 |
Mlx-IP, isoform 3 |
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| |
1.2.6.6.2.4 |
Mlx-IP, isoform 4 |
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| |
1.2.6.6.2.5 |
Mlx-IP, isoform 5 |
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| |
1.2.6.6.3 |
MondoB (Mlx-IPL, WS-bHLH) |
 |
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|
| |
1.2.6.6.3.1 |
WS-bHLHα, isoform 1 |
|
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|
| |
1.2.6.6.3.2 |
WS-bHLHβ, isoform 2 |
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| |
1.2.6.6.3.3 |
WS-bHLHγ, isoform 3 |
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| |
1.2.6.6.3.4 |
WS-bHLHδ, isoform 4 |
|
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|
| |
1.2.6.6.3.5 |
WS-bHLHε, isoform 5 |
|
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|
| |
1.2.6.6.3.6 |
WS-bHLH, isoform 6 |
|
|
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|
| |
1.2.6.7 |
Subfamily: Mad1-like factors |
CACGTG |
|
| |
1.2.6.7.1 |
Mad1 (MXD1) |
|
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|
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|
| |
1.2.6.7.1.1 |
Mad1, isoform 1 |
|
|
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|
| |
1.2.6.7.1.2 |
Mad1, isoform 2 |
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|
| |
1.2.6.7.2 |
Mad3 (MXD3) |
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|
| |
1.2.6.7.2.1 |
Mad3, isoform 1 |
|
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|
| |
1.2.6.7.2.2 |
Mad3, isoform 2 |
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|
| |
1.2.6.7.2.3 |
Mad3, isoform 3 |
|
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|
| |
1.2.6.7.3 |
Mad4 (MXD4) |
|
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|
| |
1.2.6.7.5 |
Mxi-1 |
|
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|
| |
1.2.6.7.5.1 |
Mxi-1, isoform 1 |
|
|
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|
| |
1.2.6.7.5.2 |
Mxi-1, isoform 2 |
|
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|
| |
1.2.6.7.5.3 |
Mxi-1, isoform 3 |
|
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|
| |
1.2.6.7.5.4 |
Mxi-1, isoform 4 |
|
|
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|
| |
1.2.6.7.6 |
Mnt |
 |
|
|
|
|
F |
|
| |
1.2.6.8 |
Subfamily: Mad5-like factors |
CACGTG |
|
| |
1.2.6.8.1 |
Mad5 (MGA) = 6.5.5.0.2 |
|
|
|
|
|
|
|
| |
1.2.6.8.1.1 |
Mad5, isoform 1 |
|
|
|
|
|
| |
1.2.6.8.1.2 |
Mad5, isoform 2 |
|
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|
| |
1.2.6.8.1.3 |
Mad5, isoform 3 |
|
|
|
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|
| |
1.2.6.8.1.4 |
Mad5, isoform 4 |
|
|
|
|
|
| |
1.2.8 |
Family: HLH domain only |
|
|
| |
1.2.8.0.1 |
Id1 |
|
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|
|
|
|
|
| |
1.2.8.0.1.1 |
Id1a |
|
|
|
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|
| |
1.2.8.0.1.2 |
Id1b |
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|
| |
1.2.8.0.2 |
Id2 |
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|
| |
1.2.8.0.3 |
Id3 |
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|
| |
1.2.8.0.4 |
Id4 |
 |
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1.3 |
Class: Basic helix-span-helix factors (bHSH) |
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| |
1.3.1 |
Family: AP-2 |
GCCTGAGGC |
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| |
1.3.1.0.1 |
AP-2α |
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| |
1.3.1.0.1.1 |
AP-2αA, isoform 1 |
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1.3.1.0.1.2 |
AP-2α, isoform 2 |
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1.3.1.0.1.4 |
AP-2αB, isoform 4 |
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1.3.1.0.1.5 |
AP-2α, isoform 5 |
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1.3.1.0.2 |
AP-2β |
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1.3.1.0.2.1 |
AP-2β, isoform 1 |
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1.3.1.0.2.2 |
AP-2β, isoform 2 |
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1.3.1.0.3 |
AP-2γ |
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| |
1.3.1.0.3.1 |
AP-2γ, isoform 1 |
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1.3.1.0.3.2 |
AP-2γ, isoform 2 |
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1.3.1.0.4 |
AP-2δ |
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1.3.1.0.5 |
AP-2ε |
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| 2 |
Superclass: Zinc-coordinating DNA-binding domains |
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2.1 |
Class: Nuclear receptors with C4 zinc fingers |
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| |
2.1.1 |
Family: Steroid hormone receptors (NR3) |
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| |
2.1.1.1 |
Subfamily: GR-like receptors (NR3C) |
AGAACATGATGTTCT |
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| |
2.1.1.1.1 |
Glucocorticoid receptor (GR) (NR3C1) |
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2.1.1.1.1.1 |
GRα, isoform α |
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2.1.1.1.1.2 |
GRβ, isoform β |
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2.1.1.1.1.3 |
GRα2, isoform α2 |
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2.1.1.1.1.4 |
GRβ2, isoform β2 |
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2.1.1.1.1.5 |
GR-Aα |
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2.1.1.1.1.6 |
GR-Aβ |
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2.1.1.1.1.7 |
GR-P |
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2.1.1.1.1.8 |
GRαB, isoform αB |
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2.1.1.1.1.9 |
GRβB, isoform βB |
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2.1.1.1.1.10 |
GRΔ313-338, isoform 10 |
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2.1.1.1.1.11 |
GRαC1, isoform αC1 |
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2.1.1.1.1.12 |
GRαC2, isoform αC2 |
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2.1.1.1.1.13 |
GRαC3, isoform αC3 |
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2.1.1.1.1.14 |
GRαD1, isoform αD1 |
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2.1.1.1.1.15 |
GRαD2, isoform αD2 |
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| |
2.1.1.1.1.16 |
GRαD3, isoform αD3 |
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| |
2.1.1.1.2 |
Mineralocorticoid receptor (MR) (NR3C2) |
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| |
2.1.1.1.2.1 |
MR, isoform 1 |
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| |
2.1.1.1.2.2 |
MR, isoform 2 |
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2.1.1.1.2.3 |
MR, isoform 3 |
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2.1.1.1.2.4 |
MR-δ, isoform 4 |
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| |
2.1.1.1.3 |
Progesterone receptor (PR) (NR3C3) |
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| |
2.1.1.1.3.1 |
PR, isoform A |
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| |
2.1.1.1.3.2 |
PR, isoform B |
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2.1.1.1.3.3 |
PR, isoform 3 |
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| |
2.1.1.1.3.4 |
PR, isoform 4 (PR-M) |
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2.1.1.1.3.5 |
PR, isoform 5 (δ4) |
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| |
2.1.1.1.4 |
Androgen receptor (AR) (NR3C4) |
 |
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| |
2.1.1.1.4.1 |
AR-A, isoform 2 |
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| |
2.1.1.1.4.2 |
AR-B, isoform 1 |
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| |
2.1.1.1.4.3 |
AR3, isoform 3 |
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| |
2.1.1.1.4.4 |
AR4, isoform 4 |
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| |
2.1.1.2 |
Subfamily: ER-like receptors (NR3A&B) |
AGGTCACAGTGACCT |
|
| |
2.1.1.2.1 |
Estrogen receptor α (ERα) (ESR1, NR3A1) |
 |
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| |
2.1.1.2.1.1 |
ERα long, isoform 1 |
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| |
2.1.1.2.1.2 |
ERα short, isoform 2 |
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2.1.1.2.1.3 |
ERα46, isoform 3 |
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| |
2.1.1.2.1.4 |
ERα36, isoform 4 |
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| |
2.1.1.2.2 |
Estrogen receptor β (ERβ) (NR3A2) |
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| |
2.1.1.2.2.1 |
ERβ1, isoform 1 |
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| |
2.1.1.2.2.2 |
ERβ2, isoform 2 |
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| |
2.1.1.2.2.3 |
ERβ2A, isoform 3 |
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| |
2.1.1.2.2.4 |
ERβ3, isoform 4 |
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| |
2.1.1.2.2.5 |
ERβ4, isoform 5 |
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| |
2.1.1.2.2.6 |
ERβ5, isoform 6 |
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| |
2.1.1.2.2.7 |
ERβ5A, isoform 7 |
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| |
2.1.1.2.2.8 |
ERβ6, isoform 8 |
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| |
2.1.1.2.2.9 |
ERβ, isoform 9 |
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| |
2.1.1.2.3 |
ERR1 (ERRα, ESRRA) (NR3B1) |
 |
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| |
2.1.1.2.3.1 |
ERR1, isoform 1 |
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| |
2.1.1.2.3.2 |
ERR1, isoform 2 |
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| |
2.1.1.2.4 |
ERR2 (ERRβ, ESRRB) (NR3B2) |
 |
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| |
2.1.1.2.4.1 |
ERRβ2δ10, isoform 1 |
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| |
2.1.1.2.4.2 |
ERRβ, isoform 2 |
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| |
2.1.1.2.4.3 |
ERRβshort, isoform 3 |
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| |
2.1.1.2.5 |
ERR3 (ERRγ, ESRRG) (NR3B3) |
 |
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| |
2.1.1.2.5.1 |
ERR3, isoform 1 |
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| |
2.1.1.2.5.2 |
ERR3, isoform 2 |
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| |
2.1.1.2.5.3 |
ERR3, isoform 3 |
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| |
2.1.1.2.5.4 |
ERR3, isoform 4 |
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| |
2.1.1.2.5.5 |
ERR3, isoform 5 |
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| |
2.1.2 |
Family: Thyroid hormone receptor-related factors (NR1) |
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|
| |
2.1.2.1 |
Subfamily: Retinoic acid receptors (NR1B) |
TGACCTTTGACCT |
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| |
2.1.2.1.1 |
RAR-α (NR1B1) |
 |
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| |
2.1.2.1.1.1 |
RAR-α1 |
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2.1.2.1.1.2 |
RAR-α2 |
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| |
2.1.2.1.1.3 |
RAR-α1-ΔBC |
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| |
2.1.2.1.2 |
RAR-β (NR1B2) |
 |
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| |
2.1.2.1.2.1 |
RAR-β1 |
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| |
2.1.2.1.2.2 |
RAR-β2 |
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| |
2.1.2.1.2.3 |
RAR-β3 |
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| |
2.1.2.1.2.4 |
RAR-β4 |
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| |
2.1.2.1.3 |
RAR-γ (NR1B3) |
 |
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| |
2.1.2.1.3.1 |
RAR-γ, isoform 1 |
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| |
2.1.2.1.3.2 |
RAR-γ, isoform 2 |
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| |
2.1.2.1.3.3 |
RAR-γ, isoform 3 |
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| |
2.1.2.1.3.4 |
RAR-γ, isoform 4 |
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| |
2.1.2.2 |
Subfamily: Thyroid hormone receptors (NR1A) |
TGACCTGAAATGACCT |
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| |
2.1.2.2.1 |
T3R-α (THRA) (NR1A1) |
 |
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| |
2.1.2.2.1.1 |
T3R-α1 |
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2.1.2.2.1.2 |
T3R-α2 |
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| |
2.1.2.2.1.3 |
T3R-α3 |
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| |
2.1.2.2.1.4 |
T3R-α4 |
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| |
2.1.2.2.2 |
T3R-β (NR1A2) |
 |
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| |
2.1.2.2.2.1 |
T3R-β1 |
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| |
2.1.2.2.2.2 |
T3R-β2 |
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| |
2.1.2.3 |
Subfamily: Rev-ErbA (NR1D) |
TGACCTAGTGACCT |
|
| |
2.1.2.3.1 |
Rev-ErbAα (NR1D1) |
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| |
2.1.2.3.2 |
Rev-ErbAβ (NR1D2) |
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| |
2.1.2.4 |
Subfamily: Vitamin D receptor (NR1I) |
TGACCTTCGTGACCT |
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| |
2.1.2.4.1 |
VDR (NR1I1) |
 |
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| |
2.1.2.4.1.1 |
VDR, isoform 1 |
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2.1.2.4.1.2 |
VDR, isoform 2 |
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2.1.2.4.2 |
PXR (NR1I2) |
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| |
2.1.2.4.2.1 |
PRR1-A |
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2.1.2.4.2.2 |
PRR1-B |
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2.1.2.4.2.3 |
PRR1-C |
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2.1.2.4.2.4 |
PRR2-A |
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2.1.2.4.2.5 |
PRR2-B |
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2.1.2.4.2.6 |
PRR2-C |
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2.1.2.4.2.7 |
PRR3 |
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| |
2.1.2.4.3 |
CAR (NR1I3) |
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| |
2.1.2.4.3.1 |
CAR, isoform 1 |
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| |
2.1.2.4.3.2 |
CAR, isoform 2 |
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2.1.2.4.3.3 |
CAR, isoform 3 |
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2.1.2.4.3.4 |
CAR, isoform 4 |
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2.1.2.4.3.5 |
CAR, isoform 5 |
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2.1.2.4.3.6 |
CAR, isoform 6 |
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2.1.2.4.3.7 |
CAR, isoform 7 |
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| |
2.1.2.4.3.8 |
CAR, isoform 8 |
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| |
2.1.2.4.3.9 |
CAR, isoform 9 |
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| |
2.1.2.4.3.10 |
CAR, isoform 10 |
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| |
2.1.2.4.3.11 |
CAR, isoform 11 |
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| |
2.1.2.4.3.12 |
CAR, isoform 12 |
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2.1.2.4.3.13 |
CAR, isoform 13 |
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2.1.2.4.3.14 |
CAR, isoform 14 |
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2.1.2.4.3.15 |
CAR, isoform 15 |
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| |
2.1.2.5 |
Subfamily: PPAR (NR1C) |
TGACCTTTGACCT |
|
| |
2.1.2.5.1 |
PPARα (NR1C1) |
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| |
2.1.2.5.1.1 |
PPARα, isoform 1 |
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| |
2.1.2.5.1.2 |
PPARα, isoform 2 |
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| |
2.1.2.5.2 |
PPARβ (PPARδ) (NR1C2) |
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| |
2.1.2.5.2.1 |
PPARβ, isoform 1 |
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| |
2.1.2.5.2.2 |
PPARβ, isoform 2 |
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| |
2.1.2.5.2.3 |
PPARβ, isoform 3 |
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| |
2.1.2.5.2.4 |
PPARβ, isoform 4 |
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| |
2.1.2.5.3 |
PPARγ (NR1C3) |
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| |
2.1.2.5.3.1 |
PPARγ1(wt), isoform 1 |
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| |
2.1.2.5.3.2 |
PPARγ2, isoform 2 |
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| |
2.1.2.5.3.3 |
PPARγ1(tr), isoform 3 |
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| |
2.1.2.6 |
Subfamily: ROR (NR1F) |
TGACCTACTTAT |
|
| |
2.1.2.6.1 |
RORα (NR1F1) |
 |
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|
F |
|
| |
2.1.2.6.1.1 |
RORα1 |
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| |
2.1.2.6.1.2 |
RORα2 |
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| |
2.1.2.6.1.3 |
RORα3 |
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| |
2.1.2.6.1.4 |
RORα4 |
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| |
2.1.2.6.2 |
RORβ (NR1F2) |
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| |
2.1.2.6.2.1 |
RORβ, isoform 1 |
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| |
2.1.2.6.2.2 |
RORβ, isoform 2 |
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| |
2.1.2.6.3 |
RORγ (NR1F3) |
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| |
2.1.2.6.3.1 |
RORγ, isoform 1 |
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| |
2.1.2.6.3.2 |
RORγ, isoform 2 |
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| |
2.1.2.7 |
Subfamily: LXR (NR1H) |
TGACCTCTACTGACCT |
|
| |
2.1.2.7.1 |
LXRα (NR1H3) |
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| |
2.1.2.7.1.1 |
LXRα, isoform 1 |
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| |
2.1.2.7.1.2 |
LXRα, isoform 2 |
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| |
2.1.2.7.1.3 |
LXRα, isoform 3 |
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|
| |
2.1.2.7.2 |
LXRβ (NR1H2) |
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| |
2.1.2.7.2.1 |
LXRβ, isoform 1 |
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| |
| |
2.1.2.7.2.2 |
LXRβ, isoform 2 |
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| |
| |
2.1.2.7.3 |
FXR (NR1H4) |
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| |
2.1.2.7.3.1 |
FXR, isoform 1 |
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| |
2.1.2.7.3.2 |
FXR, isoform 2 |
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| |
2.1.2.7.3.3 |
FXR, isoform 3 |
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| |
2.1.2.7.3.4 |
FXR, isoform 4 |
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| |
2.1.2.7.3.5 |
FXR, isoform 5 |
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| |
2.1.3 |
Family: RXR-related receptors (NR2) |
(TGACCT) |
|
| |
2.1.3.1 |
Subfamily: Retinoid X receptors (NR2B) |
(TGACCT) |
|
| |
2.1.3.1.1 |
RXRα (NR2B1) |
 |
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|
| |
2.1.3.1.1.1 |
RXRα, isoform 1 |
|
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| |
2.1.3.1.1.2 |
RXRα, isoform 2 |
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|
| |
2.1.3.1.2 |
RXRβ (NR2B2) |
 |
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|
F |
|
| |
2.1.3.1.2.1 |
RXRβ, isoform 1 |
|
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|
| |
2.1.3.1.2.2 |
RXRβ, isoform 2 |
|
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| |
2.1.3.1.3 |
RXRγ (NR2B3) |
 |
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|
| |
2.1.3.2 |
Subfamily: HNF-4 (NR2A) |
AGTCCAAAGTTCA |
|
| |
2.1.3.2.1 |
HNF-4α (NR2A1) |
 |
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|
| |
2.1.3.2.1.1 |
HNF-4α1 |
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| |
2.1.3.2.1.2 |
HNF-4α2 |
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|
| |
2.1.3.2.1.3 |
HNF-4α3 |
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2.1.3.2.1.4 |
HNF-4α4 |
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| |
2.1.3.2.1.5 |
HNF-4α7 |
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| |
2.1.3.2.1.6 |
HNF-4α8 |
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2.1.3.2.1.7 |
HNF-4α9 |
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| |
2.1.3.2.2 |
HNF-4γ (NR2A2) |
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| |
2.1.3.2.2.1 |
HNF-4γ, isoform 1 |
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| |
2.1.3.2.2.2 |
HNF-4γ, isoform 2 |
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| |
2.1.3.3 |
Subfamily: Tailless-like receptors (NR2E) |
TGACCTTTGACCT |
|
| |
2.1.3.3.1 |
Tlx (NR2E1) |
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| |
2.1.3.3.1.1 |
Tlx, isoform 1 |
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| |
2.1.3.3.1.2 |
Tlx, isoform 2 |
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| |
2.1.3.3.2 |
PNR (NR2E3) |
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| |
2.1.3.3.2.1 |
PNR, isoform long |
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| |
2.1.3.3.2.2 |
PNR, isoform short |
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| |
2.1.3.4 |
Subfamily: Testicular receptors (NR2C) |
TGACCTCTGACCT |
|
| |
2.1.3.4.1 |
TR2 (NR2C1) |
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2.1.3.4.1.1 |
TR2-11, isoform 1 |
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2.1.3.4.1.2 |
TR2-9, isoform 2 |
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2.1.3.4.1.3 |
TR2-7, isoform 3 |
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2.1.3.4.2 |
TR4 (NR2C2) |
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2.1.3.4.2.1 |
TR4, isoform 1 |
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2.1.3.4.2.2 |
TR4, isoform 2 |
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2.1.3.5 |
Subfamily: COUP-like receptors (NR2F) |
TGACCTTTGACCT |
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| |
2.1.3.5.1 |
COUP-TFI (NR2F1) |
 |
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| |
2.1.3.5.2 |
COUP-TFII (NR2F2) |
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| |
2.1.3.5.2.1 |
COUP-TFII, isoform 1 |
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2.1.3.5.2.2 |
COUP-TFII, isoform 2 |
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| |
2.1.3.5.2.3 |
COUP-TFII, isoform 3 |
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2.1.3.5.3 |
EAR2 (NR2F6) |
 |
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| |
2.1.4 |
Family: NGFI-B-related receptors (NR4) |
TGACCTTT |
|
| |
2.1.4.0.1 |
NGFI-B (NR4A1) |
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| |
2.1.4.0.1.1 |
NGFI-B, isoform 1 |
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| |
2.1.4.0.1.2 |
NGFI-B, isoform 2 |
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2.1.4.0.1.3 |
NGFI-B, isoform 3 |
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| |
2.1.4.0.2 |
NURR1 (NR4A2) |
 |
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| |
2.1.4.0.2.1 |
NURR1, isoform 1 |
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| |
2.1.4.0.2.2 |
NURR1, isoform 2 |
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| |
2.1.4.0.3 |
NOR1 (NR4A3) |
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| |
2.1.4.0.3.1 |
NOR1, isoform α |
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| |
2.1.4.0.3.2 |
NOR1, isoform β |
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| |
2.1.4.0.3.3 |
NOR1, isoform 3 |
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|
| |
2.1.5 |
Family: FTZ-F1-related receptors (NR5) |
TGACCTTG |
|
| |
2.1.5.0.1 |
FTZ-F1 (SF-1) (NR5A1) |
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| |
2.1.5.0.2 |
LRH-1 (NR5A2) |
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| |
2.1.5.0.2.1 |
LRH-1, isoform 1 |
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| |
2.1.5.0.2.2 |
LRH-1, isoform 2 |
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| |
2.1.5.0.2.3 |
LRH-1, isoform 3 |
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| |
2.1.5.0.2.4 |
LRH-1, isoform 4 |
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| |
2.1.6 |
Family: GCNF-related receptors (NR6) |
TGAACTTGACTTGA |
|
| |
2.1.6.0.1 |
GCNF (NR6A1) |
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F |
|
| |
2.1.6.0.1.1 |
GCNF-2, isoform 1 |
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| |
2.1.6.0.1.2 |
GCNF-1, isoform 2 |
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| |
2.1.6.0.1.3 |
GCNF, isoform 3 |
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| |
2.1.6.0.1.4 |
GCNF, isoform 4 |
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| |
2.1.6.0.1.5 |
GCNF, isoform 5 |
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|
| |
2.1.7 |
Family: DAX-related receptors (NR0) |
TGACCTT |
|
| |
2.1.7.0.1 |
DAX1 (NR0B1) |
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|
| |
2.1.7.0.1.1 |
DAX1, isoform 1 |
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| |
2.1.7.0.1.2 |
DAX1, isoform 2 |
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| |
2.1.7.0.2 |
SHP (NR0B2) |
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|
| |
2.2 |
Class: Other C4 zinc finger-type factors |
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|
| |
2.2.1 |
Family: GATA-type zinc fingers |
|
|
| |
2.2.1.1 |
Subfamily: Two zinc-finger GATA factors |
AGATAA |
|
| |
2.2.1.1.1 |
GATA-1 (GF-1, EryF1, NF-E1) |
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|
| |
2.2.1.1.1.1 |
GATA-1, isoform 1 |
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|
| |
2.2.1.1.1.2 |
GATA-1, isoform 2 |
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|
| |
2.2.1.1.1.3 |
GATA-1s, isoform 3 |
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| |
2.2.1.1.2 |
GATA-2 |
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|
| |
2.2.1.1.2.1 |
GATA-2, isoform 1 |
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| |
2.2.1.1.2.2 |
GATA-2, isoform 2 |
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| |
2.2.1.1.3 |
GATA-3 |
 |
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|
| |
2.2.1.1.3.1 |
GATA-3, isoform 1 |
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| |
2.2.1.1.3.2 |
GATA-3, isoform 2 |
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|
| |
2.2.1.1.4 |
GATA-4 |
 |
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|
| |
2.2.1.1.4.1 |
GATA-4, isoform 1 |
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| |
2.2.1.1.4.2 |
GATA-4, isoform 2 |
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| |
2.2.1.1.5 |
GATA-5 |
 |
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| |
2.2.1.1.6 |
GATA-6 |
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|
| |
2.2.1.1.6.1 |
GATA-6, isoform 1 |
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| |
2.2.1.1.6.2 |
GATA-6, isoform 2 |
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|
| |
2.2.1.2 |
Subfamily: Single GATA-type zinc-finger |
AGATAA |
|
| |
2.2.1.2.1 |
GATAD1 (ODAG) |
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| |
2.2.1.2.2 |
p66-α (GATAD2A) |
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| |
2.2.1.2.2.1 |
p66-α, isoform 1 |
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| |
2.2.1.2.2.2 |
p66-α, isoform 2 |
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| |
2.2.1.2.2.3 |
p66-α, isoform 3 |
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| |
2.2.1.2.3 |
p66-β (GATAD2B) |
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| |
2.2.1.2.4 |
RERE (ARG, ARP, ATN1L) = 3.5.1.3.7 |
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| |
2.2.1.2.4.1 |
RERE, isoform 1 |
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| |
2.2.1.2.4.2 |
RERE, isoform 2 |
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| |
2.2.1.2.5 |
MTA1 = 3.5.1.3.4 |
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| |
2.2.1.2.5.1 |
MTA1, isoform 1 (MTA1l) |
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| |
2.2.1.2.5.2 |
MTA1, isoform 2 (MTA1s) |
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| |
2.2.1.2.5.3 |
MTA1, isoform 3 |
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| |
2.2.1.2.6 |
MTA2 (MTA1L1, PID) = 3.5.1.3.5 |
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| |
2.2.1.2.6.1 |
MTA2, isoform 1 |
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| |
2.2.1.2.6.2 |
MTA2, isoform 2 |
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| |
2.2.1.2.7 |
MTA3 = 3.5.1.3.6 |
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F |
|
| |
2.2.1.2.7.1 |
MTA3, isoform 1 |
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| |
2.2.1.2.7.2 |
MTA3, isoform 2 |
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| |
2.2.1.2.8 |
ZGLP1 (GLP-1) |
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|
| |
2.2.1.2.9 |
DNMT3A |
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| |
2.2.1.2.9.1 |
DNMT3A, isoform 1 |
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| |
2.2.1.2.9.2 |
DNMT3A, isoform 2 |
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| |
2.2.1.2.9.3 |
DNMT3A, isoform 3 |
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| |
2.2.1.2.10 |
DNMT3B |
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|
| |
2.2.1.2.10.1 |
DNMT3B, isoform 1 |
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| |
2.2.1.2.10.2 |
DNMT3B, isoform 2 |
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| |
2.2.1.2.10.3 |
DNMT3B, isoform 3 |
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| |
2.2.1.2.10.4 |
DNMT3B, isoform 4 |
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| |
2.2.1.2.10.5 |
DNMT3B, isoform 5 |
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| |
2.2.1.2.10.6 |
DNMT3B, isoform 6 |
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| |
2.2.1.2.10.7 |
DNMT3B, isoform 7 |
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| |
2.2.1.2.10.8 |
DNMT3B, isoform 8 |
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| |
2.2.1.2.11 |
DNMT3L |
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|
| |
2.2.1.2.11.1 |
DNMT3L, isoform 1 |
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| |
2.2.1.2.11.2 |
DNMT3L, isoform 2 |
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|
| |
2.2.1.2.12 |
ATRX (RAD54L, XH2) |
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|
| |
2.2.1.2.12.1 |
ATRX, isoform 1 |
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| |
2.2.1.2.12.2 |
ATRX, isoform 2 |
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| |
2.2.1.2.12.3 |
ATRX, isoform 3 |
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| |
2.2.1.2.12.4 |
ATRX, isoform 4 |
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| |
2.2.1.2.12.5 |
ATRX, isoform 5 |
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| |
2.2.1.2.12.6 |
ATRX, isoform 6 |
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|
| |
2.2.1.2.13 |
TRPS1 (GC79) = 2.3.4.0.20 |
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|
| |
2.2.1.2.13.1 |
TRPS1, isoform 1 |
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| |
2.2.1.2.13.2 |
TRPS1, isoform 2 |
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|
| |
2.2.1.2.13.3 |
TRPS1, isoform 3 |
|
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|
| |
2.3 |
Class: C2H2 zinc finger factors |
|
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|
| |
2.3.1 |
Family: Three-zinc finger Krüppel-related factors |
|
|
| |
2.3.1.1 |
Subfamily: Sp1-like factors |
GGGGCGGGG |
|
| |
2.3.1.1.1 |
Sp1 |
 |
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|
| |
2.3.1.1.1.1 |
Sp1, isoform 1 (Sp1a) |
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| |
2.3.1.1.1.2 |
Sp1, isoform 2 (Sp1b) |
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| |
2.3.1.1.1.3 |
Sp1, isoform 3 (Sp1c) |
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|
| |
2.3.1.1.2 |
Sp2 |
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|
| |
2.3.1.1.2.1 |
Sp2, isoform 1 |
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| |
2.3.1.1.2.2 |
Sp2, isoform 2 |
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|
| |
2.3.1.1.3 |
Sp3 |
 |
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|
F |
|
| |
2.3.1.1.3.1 |
Sp3, isoform 1 (L-Sp3) |
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| |
2.3.1.1.3.2 |
Sp3, isoform 2 |
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|
| |
2.3.1.1.3.3 |
Sp3, isoform 3 (M1-Sp3) |
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| |
2.3.1.1.3.4 |
Sp3, isoform 4 (M2-Sp3) |
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| |
2.3.1.1.3.5 |
Sp3, isoform 5 |
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|
| |
2.3.1.1.3.6 |
Sp3, isoform 6 |
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| |
2.3.1.1.4 |
Sp4 |
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| |
2.3.1.1.5 |
Sp5 |
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| |
2.3.1.1.6 |
Sp6 |
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|
| |
2.3.1.1.7 |
Sp7 (OSX) |
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|
| |
2.3.1.1.7.1 |
Sp7, isoform 1 (Sp7α, long) |
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|
| |
2.3.1.1.7.2 |
Sp7, isoform 2 (Sp7β, short) |
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|
| |
2.3.1.1.8 |
Sp8 |
 |
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|
| |
2.3.1.1.8.1 |
Sp8, isoform 1 |
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|
| |
2.3.1.1.8.2 |
Sp8, isoform 2 |
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|
| |
2.3.1.1.8.3 |
Sp8, isoform 3 |
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| |
2.3.1.1.8.4 |
Sp8, isoform 4 |
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|
| |
2.3.1.1.9 |
Sp9 |
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|
| |
2.3.1.2 |
Subfamily: Krüppel-like factors |
CCACACCCT |
|
| |
2.3.1.2.1 |
KLF1 (EKLF) |
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| |
2.3.1.2.2 |
KLF2 (LKLF) |
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|
| |
2.3.1.2.3 |
KLF3 (BKLF) |
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|
| |
2.3.1.2.3.1 |
KLF3, isoform 1 |
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|
| |
2.3.1.2.3.2 |
KLF3, isoform 2 |
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|
| |
2.3.1.2.4 |
KLF4 (GKLF) |
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|
| |
2.3.1.2.4.1 |
KLF4, isoform 1 |
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|
| |
2.3.1.2.4.2 |
KLF4, isoform 2 |
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| |
2.3.1.2.4.3 |
KLF4, isoform 3 |
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|
| |
2.3.1.2.4.4 |
KLF4, isoform 4 |
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|
| |
2.3.1.2.4.5 |
KLF4, isoform 5 |
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|
| |
2.3.1.2.5 |
KLF5 (CKLF, IKLF, BTEB2) |
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|
| |
2.3.1.2.5.1 |
KLF5, isoform 1 |
|
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|
| |
2.3.1.2.5.2 |
KLF5, isoform 2 |
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| |
2.3.1.2.5.3 |
KLF5, isoform 3 |
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|
| |
2.3.1.2.5.4 |
KLF5, isoform 4 |
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|
| |
2.3.1.2.6 |
KLF6 (CPBP, BCD1) |
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|
| |
2.3.1.2.6.1 |
KLF6, isoform 1 |
|
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|
| |
2.3.1.2.6.2 |
KLF6, isoform 2 |
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| |
2.3.1.2.6.3 |
KLF6, isoform 3 |
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|
| |
2.3.1.2.7 |
KLF7 (UKLF) |
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|
F |
|
| |
2.3.1.2.7.1 |
KLF7, isoform 1 |
|
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|
| |
2.3.1.2.7.2 |
KLF7, isoform 2 |
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| |
2.3.1.2.7.3 |
KLF7, isoform 3 |
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|
| |
2.3.1.2.7.4 |
KLF7, isoform 4 |
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|
| |
2.3.1.2.7.5 |
KLF7, isoform 5 |
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|
| |
2.3.1.2.7.6 |
KLF7, isoform 6 |
|
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|
| |
2.3.1.2.8 |
KLF8 (BKLF) |
|
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|
| |
2.3.1.2.8.1 |
KLF8, isoform 1 |
|
|
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| |
2.3.1.2.8.2 |
KLF8, isoform 2 |
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| |
2.3.1.2.8.3 |
KLF8, isoform 3 |
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| |
2.3.1.2.8.4 |
KLF8, isoform 4 |
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| |
2.3.1.2.9 |
KLF9 (BTEB1) |
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| |
2.3.1.2.10 |
KLF10 (TIEG1) |
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| |
2.3.1.2.10.1 |
KLF10, isoform 1 |
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| |
2.3.1.2.10.2 |
KLF10, isoform 2 |
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| |
2.3.1.2.10.3 |
KLF10, isoform 3 |
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| |
2.3.1.2.10.4 |
KLF10, isoform 4 |
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| |
2.3.1.2.11 |
KLF11 (FKLF, TIEG2) |
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| |
2.3.1.2.11.1 |
KLF11, isoform 1 |
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| |
2.3.1.2.11.2 |
KLF11, isoform 2 |
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| |
2.3.1.2.12 |
KLF12 (AP-2rep) |
 |
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| |
2.3.1.2.12.1 |
KLF12, isoform 1 |
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| |
2.3.1.2.12.2 |
KLF12, isoform 2 |
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| |
2.3.1.2.12.3 |
KLF12, isoform 3 |
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| |
2.3.1.2.13 |
KLF13 (BTEB3, NSLP1) |
 |
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| |
2.3.1.2.14 |
KLF14 (BTEB5) |
 |
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| |
2.3.1.2.15 |
KLF15 (KKLF) |
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2.3.1.2.16 |
KLF16 (BTEB4, NSLP2) |
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2.3.1.2.17 |
KLF17 |
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| |
2.3.1.3 |
Subfamily: EGR factors |
GCGTGGGCG |
|
| |
2.3.1.3.1 |
EGR1 (Krox-24, Zif268) |
 |
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| |
2.3.1.3.2 |
EGR2 (Krox-20) |
 |
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| |
2.3.1.3.2.1 |
EGR2, isoform long |
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| |
2.3.1.3.2.2 |
EGR2, isoform short |
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| |
2.3.1.3.3 |
EGR3 (PILOT) |
 |
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| |
2.3.1.3.3.1 |
EGR3, isoform 1 |
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| |
2.3.1.3.3.2 |
EGR3, isoform 2 |
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| |
2.3.1.3.4 |
EGR4 |
 |
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| |
2.3.2 |
Family: Other factors with up to three adjacent zinc fingers |
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| |
2.3.2.1 |
Subfamily: Factors with 2-3 adjacent zinc fingers
and a BTB/POZ domain |
TCCTGCTA |
|
| |
2.3.2.1.1 |
ZBTB5 [2] |
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| |
2.3.2.1.2 |
ZBTB8B [2] |
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| |
2.3.2.1.2.1 |
ZBTB8B, isoform 1 |
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| |
2.3.2.1.2.2 |
ZBTB8B, isoform 2 |
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| |
2.3.2.1.6 |
ZBTB22 (ZNF297, BING1) [3] |
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| |
2.3.2.1.7 |
ZBTB32 (ZNF538, FAZF) [3] |
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| |
2.3.2.1.8 |
ZBTB34 [3] |
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| |
2.3.2.1.9 |
ZBTB37 [3] |
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| |
2.3.2.1.9.1 |
ZBTB37, isoform 1 |
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| |
2.3.2.1.9.2 |
ZBTB37, isoform 2 |
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| |
2.3.2.1.9.3 |
ZBTB37, isoform 3 |
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| |
2.3.2.1.10 |
ZBTB43 (ZBTB22B, ZNF297B) [3] |
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| |
2.3.2.1.11 |
ZBTB46 (BTBD4, ZNF340) [2] |
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| |
2.3.2.1.12 |
ZBTB33 (KAISO, ZNF348) [3] |
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|
| |
2.3.2.2 |
Subfamily: Factors with 2-3 adjacent zinc fingers
and a KRAB domain |
|
|
| |
2.3.2.2.1 |
ZNF487 [3] |
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| |
2.3.2.2.1.1 |
ZNF487, isoform 1 |
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| |
2.3.2.2.1.2 |
ZNF487, isoform 2 |
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| |
2.3.2.2.2 |
ZNF542 (ZNF542P) [2] |
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|
| |
2.3.2.2.2.1 |
ZNF542, isoform 1 |
|
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|
| |
2.3.2.2.2.2 |
ZNF542, isoform 2 |
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|
| |
2.3.2.2.3 |
ZNF705A [3] |
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|
| |
2.3.2.3 |
Subfamily: Factors with 2-3 adjacent zinc fingers
and a SCAN domain |
|
|
| |
2.3.2.3.1 |
ZSCAN1 [3] |
|
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|
| |
2.3.2.3.1.1 |
ZSCAN1, isoform 1 |
|
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|
| |
2.3.2.3.1.2 |
ZSCAN1, isoform 2 |
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|
| |
2.3.2.3.2 |
ZNF174 (AW-1, ZSCAN8) [3] |
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|
| |
2.3.2.3.2.1 |
ZNF174, isoform 1 |
|
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|
| |
2.3.2.3.2.2 |
ZNF174, isoform 2 |
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|
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|
| |
2.3.2.3.3 |
ZNF396 (ZSCAN14) [3] |
|
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|
| |
2.3.2.3.3.1 |
ZNF396, isoform 1 |
|
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|
| |
2.3.2.3.3.2 |
ZNF396, isoform 2 |
|
|
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|
| |
2.3.2.3.3.3 |
ZNF396, isoform 3 |
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|
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|
| |
2.3.2.3.4 |
ZNF446 (ZKSCAN20) [3] |
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|
| |
2.3.2.3.4.1 |
ZNF446, isoform 1 |
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|
| |
2.3.2.3.4.2 |
ZNF446, isoform 2 |
|
|
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|
| |
2.3.2.4 |
Subfamily: Other three adjacent zinc finger factors |
|
|
| |
2.3.2.4.1 |
ZNF414 [3] |
|
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|
| |
2.3.2.4.1.1 |
ZNF414, isoform 1 |
|
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|
| |
2.3.2.4.1.2 |
ZNF414, isoform 2 |
|
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|
| |
2.3.2.4.2 |
ZNF511 [3] |
|
|
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|
| |
2.3.2.4.2.1 |
ZNF511, isoform 1 |
|
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|
| |
2.3.2.4.2.2 |
ZNF511, isoform 2 |
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|
| |
2.3.2.4.3 |
ZNF580 [3] |
|
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|
| |
2.3.2.4.4 |
ZNF702P [3] |
|
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|
| |
2.3.2.4.5 |
ZNF740 (ZFP740) [3] |
 |
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|
| |
2.3.2.4.6 |
ZFPM2 (ZNF89B, FOG2) = 2.7.2.0.2 [3] |
|
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|
|
F |
|
| |
2.3.2.4.6.1 |
ZFPM2, isoform 1 |
|
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|
| |
2.3.2.4.6.2 |
ZFPM2, isoform 2 |
|
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|
| |
2.3.2.4.7 |
OSR1 (ODD) [3] |
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|
| |
2.3.2.4.8 |
OVOL3 (OVL2L) [4] |
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|
F, ? |
|
| |
2.3.2.4.9 |
AEBP2 [2] |
|
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|
| |
2.3.2.4.9.1 |
AEBP2, isoform 1 |
|
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|
| |
2.3.2.4.9.2 |
AEBP2, isoform 2 |
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|
| |
2.3.2.4.9.3 |
AEBP2, isoform 3 |
|
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|
| |
2.3.3 |
Family: More than 3 adjacent zinc finger factors |
|
|
| |
2.3.3.1 |
Subfamily: GLI-like factors |
TGGGTGGTC |
|
| |
2.3.3.1.1 |
GLI1 [5] |
|
|
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|
| |
2.3.3.1.1.1 |
GLI1, isoform 1 |
|
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|
| |
2.3.3.1.1.2 |
GLI1, isoform 2 |
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|
| |
2.3.3.1.1.3 |
GLI1, isoform 3 |
|
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|
| |
2.3.3.1.2 |
GLI2 [5] |
 |
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|
| |
2.3.3.1.2.1 |
GLI2, isoform α |
|
|
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|
| |
2.3.3.1.2.2 |
GLI2, isoform β |
|
|
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|
| |
2.3.3.1.2.3 |
GLI2, isoform γ |
|
|
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|
| |
2.3.3.1.2.4 |
GLI2, isoform δ |
|
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|
| |
2.3.3.1.2.5 |
GLI2, isoform 5 |
|
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|
| |
2.3.3.1.3 |
GLI3 [5] |
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|
| |
2.3.3.1.4 |
GLIS1 [5] |
 |
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|
| |
2.3.3.1.5 |
GLIS2 (NKL) [5] |
 |
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|
| |
2.3.3.1.6 |
GLIS3 (ZNF515) [5] |
 |
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|
| |
2.3.3.1.6.1 |
GLIS3, isoform 1 |
|
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|
| |
2.3.3.1.6.2 |
GLIS3, isoform 2 |
|
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|
| |
2.3.3.1.7 |
ZIC1 (ZNF201) [5] |
 |
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|
| |
2.3.3.1.8 |
ZIC2 [5] |
|
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|
| |
2.3.3.1.9 |
ZIC3 (ZNF203) [5] |
 |
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|
| |
2.3.3.1.9.1 |
ZIC3A, isoform 1 |
|
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|
| |
2.3.3.1.9.2 |
ZIC3B, isoform 2 |
|
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|
| |
2.3.3.1.10 |
ZIC4 [5] |
 |
|
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|
|
F |
|
| |
2.3.3.1.10.1 |
ZIC4, isoform 1 |
|
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|
| |
2.3.3.1.10.2 |
ZIC4, isoform 2 |
|
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|
| |
2.3.3.1.10.3 |
ZIC4, isoform 3 |
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|
| |
2.3.3.1.10.4 |
ZIC4, isoform 4 |
|
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|
| |
2.3.3.1.10.5 |
ZIC4, isoform 5 |
|
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|
| |
2.3.3.1.11 |
ZIC5 [4] |
|
|
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|
| |
2.3.3.2 |
Subfamily: Snail-like factors |
CACCTG |
|
| |
2.3.3.2.1 |
SNAI1 [4] |
|
|
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|
| |
2.3.3.2.2 |
SNAI2 (SLUG) [5] |
 |
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|
| |
2.3.3.2.3 |
SNAI3 (ZNF293) [5] |
|
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|
| |
2.3.3.2.4 |
SCRT1 [5] |
 |
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|
| |
2.3.3.2.5 |
SCRT2 [5] |
 |
|
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|
| |
2.3.3.3 |
Subfamily: ZFP91-like factors |
|
|
| |
2.3.3.3.1 |
ZFP91 (ZNF757) [5] |
|
|
|
|
|
|
|
| |
2.3.3.3.1.1 |
ZFP91, isoform 1 |
|
|
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|
| |
2.3.3.3.1.2 |
ZFP91, isoform 2 |
|
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|
| |
2.3.3.3.2 |
ZNF692 [5] |
|
|
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|
|
|
|
| |
2.3.3.3.2.1 |
ZNF692, isoform 1 |
|
|
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|
| |
2.3.3.3.2.2 |
ZNF692, isoform 2 |
|
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|
| |
2.3.3.3.2.3 |
ZNF692, isoform 3 |
|
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|
| |
2.3.3.3.2.4 |
ZNF692, isoform 4 |
|
|
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|
| |
2.3.3.3.2.5 |
ZNF692, isoform 5 |
|
|
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|
|
| |
2.3.3.3.3 |
ZNF276 (ZFP276, ZNF477) [5] |
|
|
|
|
|
|
|
| |
2.3.3.3.3.1 |
ZNF276, isoform 1 |
|
|
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|
| |
2.3.3.3.3.2 |
ZNF276, isoform 2 |
|
|
|
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|
| |
2.3.3.3.4 |
ZNF653 (ZIP67) [5] |
|
|
|
|
|
|
|
| |
2.3.3.4 |
Subfamily: ZNF280-like zinc finger factors |
|
|
| |
2.3.3.4.1 |
ZNF280A (SUHW1, ZNF280, ZNF636) [4] |
|
|
|
|
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|
| |
2.3.3.4.2 |
ZNF280B (SUHW2, ZNF279, ZNF632, Zfp280b, Zfp653) [4] |
|
|
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|
| |
2.3.3.4.3 |
ZNF280C (SUHW3, ZNF633, Zfp280c) [5] |
|
|
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|
| |
2.3.3.4.4 |
ZNF280D (SUHW4, ZNF634, Zfp280d) [5] |
|
|
|
|
|
|
|
| |
2.3.3.4.4.1 |
ZNF280D, isoform 1 |
|
|
|
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|
| |
2.3.3.4.4.2 |
ZNF280D, isoform 2 |
|
|
|
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|
| |
2.3.3.4.4.3 |
ZNF280D, isoform 3 |
|
|
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|
| |
2.3.3.4.4.4 |
ZNF280D, isoform 4 |
|
|
|
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|
| |
2.3.3.4.4.5 |
ZNF280D, isoform 5 |
|
|
|
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|
| |
2.3.3.4.4.6 |
ZNF280D, isoform 6 |
|
|
|
|
|
| |
2.3.3.4.5 |
POGZ (SUHW5, ZNF280E, ZNF635) [9] |
|
|
|
|
|
|
|
| |
2.3.3.4.5.1 |
POGZ, isoform 1 |
|
|
|
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|
| |
2.3.3.4.5.2 |
POGZ, isoform 2 |
|
|
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|
| |
2.3.3.4.5.3 |
POGZ, isoform 3 |
|
|
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|
| |
2.3.3.4.5.4 |
POGZ, isoform 4 |
|
|
|
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|
| |
2.3.3.4.5.5 |
POGZ, isoform 5 (CRA_e) |
|
|
|
|
|
| |
2.3.3.4.5.6 |
POGZ, isoform 6 |
|
|
|
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|
| |
2.3.3.4.5.7 |
POGZ, isoform 7 |
|
|
|
|
|
| |
2.3.3.5 |
Subfamily: ZSCAN5-like zinc finger factors |
|
|
| |
2.3.3.5.1 |
ZSCAN5A (ZNF495) [5] |
|
|
|
|
|
|
|
| |
2.3.3.5.1.1 |
ZSCAN5A, isoform 1 |
|
|
|
|
|
| |
2.3.3.5.1.2 |
ZSCAN5A, isoform 2 |
|
|
|
|
|
| |
2.3.3.5.2 |
ZSCAN5B [5] |
|
|
|
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|
| |
2.3.3.5.3 |
ZSCAN5C [5] |
|
|
|
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|
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|
| |
2.3.3.5.4 |
ZSCAN5D (ZSCAN5DP) [5] |
|
|
|
|
|
|
|
| |
2.3.3.5.5 |
ZSCAN4 (ZNF494) [4] |
 |
|
|
|
|
|
|
| |
2.3.3.6 |
Subfamily: ZNF75-like zinc finger factors |
|
|
| |
2.3.3.6.1 |
ZNF75A [5] |
 |
|
|
|
|
|
|
| |
2.3.3.6.2 |
ZNF75C (ZNF75CP) [5] |
|
|
|
|
|
|
|
| |
2.3.3.6.3 |
ZNF75D (ZNF82) [5] |
|
|
|
|
|
|
|
| |
2.3.3.6.3.1 |
ZNF75D, isoform 1 |
|
|
|
|
|
| |
2.3.3.6.3.2 |
ZNF75D, isoform 2 |
|
|
|
|
|
| |
2.3.3.6.4 |
ZNF213 (ZKSCAN21) [5] |
|
|
|
|
|
|
|
| |
2.3.3.6.4.1 |
ZNF213, isoform 1 |
|
|
|
|
|
| |
2.3.3.6.4.2 |
ZNF213, isoform 2 |
|
|
|
|
|
| |
2.3.3.7 |
Subfamily: ZNF705 factors |
|
|
| |
2.3.3.7.1 |
ZNF705D [3] |
|
|
|
|
|
|
|
| |
2.3.3.7.2 |
ZNF705F [3] |
|
|
|
|
|
|
|
| |
2.3.3.7.3 |
ZNF705G [2] |
|
|
|
|
|
|
|
| |
2.3.3.7.4 |
ZNF705E [2] |
|
|
|
|
|
|
|
| |
2.3.3.8 |
Subfamily: ZBTB7 factors |
GACCCC |
|
| |
2.3.3.8.1 |
ZBTB7A [4] |
 |
|
|
|
|
|
|
| |
2.3.3.8.2 |
ZBTB7B [4] |
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2.3.3.8.2.1 |
ZBTB7B, isoform 1 |
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2.3.3.8.2.2 |
ZBTB7B, isoform 2 |
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2.3.3.8.3 |
ZBTB7C [4] |
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2.3.3.9 |
Subfamily: YY1-like factors |
GCCATCTTG |
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2.3.3.9.1 |
YY1 [4] |
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2.3.3.9.2 |
YY2 (ZNF631) [4] |
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2.3.3.9.3 |
ZFP42 (REX1, ZNF754) [4] |
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2.3.3.10 |
Subfamily: ZNF24-like factors |
TCAT |
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2.3.3.10.1 |
ZNF24 (KOX17, ZNF191, ZSCAN3) [4] |
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2.3.3.10.1.1 |
ZNF24, isoform 1 |
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2.3.3.10.1.2 |
ZNF24, isoform 2 |
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2.3.3.10.2 |
ZNF193 (ZSCAN9) [5] |
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2.3.3.10.2.1 |
ZNF193, isoform 1 |
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2.3.3.10.2.2 |
ZNF193, isoform 2 |
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2.3.3.10.3 |
ZSCAN23 (ZNF390, ZNF453) [5] |
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2.3.3.10.4 |
GLI4 (HKR4) [7] |
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2.3.3.10.5 |
ZNF232 (ZSCAN1) [5] |
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2.3.3.10.5.1 |
ZNF232, isoform long |
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2.3.3.10.5.2 |
ZNF232, isoform short |
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2.3.3.10.6 |
ZKSCAN1 (KOX18, ZNF139, ZNF36) [6] |
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2.3.3.10.7 |
ZNF323 (ZNF310P, ZSCAN31) [6] |
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2.3.3.10.7.1 |
ZNF323, isoform 1 |
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2.3.3.10.7.2 |
ZNF323, isoform 2 |
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2.3.3.11 |
Subfamily: ZBTB6-like factors |
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2.3.3.11.1 |
ZBTB6 (ZID, ZNF482) [4] |
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2.3.3.11.2 |
ZBTB26 (ZNF481) [4] |
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2.3.3.11.3 |
ZBTB12 (NG35) [4] |
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2.3.3.12 |
Subfamily: PRDM1-like factors |
AAGTGAAAGT |
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2.3.3.12.1 |
PRDM1 (BLIMP1) [4] |
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2.3.3.12.1.1 |
PRDM1, isoform 1 |
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2.3.3.12.1.2 |
PRDM1, isoform 2 |
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2.3.3.12.1.3 |
PRDM1, isoform 3 |
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2.3.3.12.2 |
ZNF683 [4] |
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2.3.3.12.2.1 |
ZNF683, isoform 1 |
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2.3.3.12.2.2 |
ZNF683, isoform 2 |
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2.3.3.13 |
Subfamily: ZNF148-like factors |
CACCC |
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2.3.3.13.1 |
ZNF148 (ZBP89) [4] |
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2.3.3.13.1.1 |
ZNF148, isoform 1 |
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2.3.3.13.1.2 |
ZNF148, isoform 2 |
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2.3.3.13.2 |
ZNF281 (GZP1, ZBP99) [4] |
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2.3.3.13.2.1 |
ZNF281, isoform 1 |
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2.3.3.13.2.2 |
ZNF281, isoform 2 |
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2.3.3.14 |
Subfamily: ZBTB20-like factors |
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2.3.3.14.1 |
ZBTB20 (DPZF, ZNF288) [5] |
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2.3.3.14.1.1 |
ZBTB20, isoform 1 |
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2.3.3.14.1.2 |
ZBTB20, isoform 2 |
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2.3.3.14.2 |
ZBTB45 (ZNF499) [4] |
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2.3.3.15 |
Subfamily: ZNF524-like factors |
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2.3.3.15.1 |
ZNF524 [4] |
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2.3.3.15.2 |
ZNF581 [4] |
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2.3.3.16 |
Subfamily: ZNF238-like factors |
AACATCTGGA |
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2.3.3.16.1 |
ZNF238 (RP58, TAZ1, ZBTB18) [4] |
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2.3.3.16.1.1 |
ZNF238, isoform 1 |
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2.3.3.16.1.2 |
ZNF238, isoform 2 |
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2.3.3.16.2 |
ZBTB42 [4] |
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2.3.3.17 |
Subfamily: OVOL-factors |
GCGGGGG |
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2.3.3.17.1 |
OVOL1 [4] |
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2.3.3.17.2 |
OVOL2 (ZNF339) [4] |
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2.3.3.17.2.1 |
OVOL2, isoform 1 |
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2.3.3.17.2.2 |
OVOL2, isoform 2 |
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2.3.3.18 |
Subfamily: ZNF56-like factors |
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2.3.3.18.1 |
ZNF56 (ZNF742) [3] |
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2.3.3.18.2 |
ZNF876P [4] |
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2.3.3.18.3 |
ZNF138 [6] |
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2.3.3.18.3.1 |
ZNF138, isoform 1 |
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2.3.3.18.3.2 |
ZNF138, isoform 2 |
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2.3.3.18.3.3 |
ZNF138, isoform 3 |
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2.3.3.19 |
Subfamily: ZNF500-like factors |
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2.3.3.19.1 |
ZNF500 (ZKSCAN18) [5] |
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2.3.3.19.1.1 |
ZNF500, isoform 1 |
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2.3.3.19.1.2 |
ZNF500, isoform 2 |
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2.3.3.19.2 |
ZNF853 [5] |
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2.3.3.19.3 |
ZKSCAN2 (ZNF694) [6] |
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2.3.3.19.3.1 |
ZKSCAN2, isoform 1 |
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2.3.3.19.3.2 |
ZKSCAN2, isoform 2 |
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2.3.3.19.4 |
ZSCAN29 (ZNF690) [6] |
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2.3.3.19.4.1 |
ZSCAN29, isoform 1 |
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2.3.3.19.4.2 |
ZSCAN29, isoform 2 |
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2.3.3.19.4.3 |
ZSCAN29, isoform 3 |
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2.3.3.19.4.4 |
ZSCAN29, isoform 4 |
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2.3.3.19.5 |
ZNF434 (ZSCAN32) [6] |
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2.3.3.19.5.1 |
ZNF434, isoform 1 |
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2.3.3.19.5.2 |
ZNF434, isoform 2 |
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2.3.3.19.5.3 |
ZNF434, isoform 3 |
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2.3.3.20 |
Subfamily: FEZF factors |
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2.3.3.20.1 |
FEZF1 (ZNF312B) [6] |
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2.3.3.20.1.1 |
FEZF1, isoform 1 |
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2.3.3.20.1.2 |
FEZF1, isoform 2 |
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2.3.3.20.1.3 |
FEZF1, isoform 3 |
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2.3.3.20.2 |
FEZF2 (FEZL, ZNF312) [6] |
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2.3.3.20.2.1 |
FEZF2, isoform 1 |
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2.3.3.20.2.2 |
FEZF2, isoform 2 |
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2.3.3.21 |
Subfamily: GFI1 factors |
AAATCACAGC |
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2.3.3.21.1 |
GFI1 (ZNF163) [6] |
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2.3.3.21.2 |
GFI1B [6] |
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2.3.3.21.2.1 |
GFI1B, isoform 1 |
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2.3.3.21.2.2 |
GFI1B, isoform 2 |
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2.3.3.22 |
Subfamily: BCL6 factors |
CTTTCTAGGAAT |
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2.3.3.22.1 |
BCL6B (BAZF, ZNF62) [5] |
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2.3.3.22.2 |
BCL6 (LAZ3, ZBTB27, ZNF51) [6] |
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2.3.3.22.2.1 |
BCL6, isoform 1 |
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2.3.3.22.2.2 |
BCL6, isoform 2 |
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2.3.3.23 |
Subfamily: ZNF212-like factors |
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2.3.3.23.1 |
ZNF212 (ZNFC150) [4] |
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2.3.3.23.2 |
ZNF777 [6] |
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2.3.3.23.2.1 |
ZNF777, isoform 1 |
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2.3.3.23.2.2 |
ZNF777, isoform 2 |
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2.3.3.23.2.3 |
ZNF777, isoform 3 |
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2.3.3.24 |
Subfamily: MTF1-like factors |
TGCACAC |
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2.3.3.24.1 |
MTF1 [6] |
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2.3.3.24.2 |
ZNF410 (APA1) [5] |
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2.3.3.24.2.1 |
ZNF410, isoform 1 |
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2.3.3.24.2.2 |
ZNF410, isoform 2 |
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2.3.3.24.2.3 |
ZNF410, isoform 3 |
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2.3.3.24.2.4 |
ZNF410, isoform 4 |
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2.3.3.24.2.5 |
ZNF410, isoform 5 |
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2.3.3.25 |
Subfamily: PLAG factors |
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2.3.3.25.1 |
PLAGL2 [6] |
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2.3.3.25.2 |
PLAG1 [7] |
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2.3.3.25.2.1 |
PLAG1, isoform 1 |
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2.3.3.25.2.2 |
PLAG1, isoform 2 |
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2.3.3.25.3 |
PLAGL1 (LOT1, ZAC) [7] |
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2.3.3.25.3.1 |
PLAGL1, isoform 1 |
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2.3.3.25.3.2 |
PLAGL1, isoform 2 (ZACδ2) |
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2.3.3.26 |
Subfamily: ZKSCAN3-like factors |
TGAGGGG |
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2.3.3.26.1 |
ZKSCAN3 (ZFP47, ZNF306, ZNF309, ZSCAN13) [7] |
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2.3.3.26.1.1 |
ZKSCAN3, isoform 1 |
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2.3.3.26.1.2 |
ZKSCAN3, isoform 2 |
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2.3.3.26.2 |
ZKSCAN4 (ZNF307, ZNF427) [7] |
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F |
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2.3.3.27 |
Subfamily: ZNF525-like factors |
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2.3.3.27.1 |
ZNF525 [7] |
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2.3.3.27.2 |
ZNF701 [7] |
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2.3.3.27.2.1 |
ZNF701, isoform 1 |
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2.3.3.27.2.2 |
ZNF701, isoform 2 |
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2.3.3.27.3 |
ZNF765 [11] |
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2.3.3.27.3.1 |
ZNF765, isoform 1 |
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2.3.3.27.3.2 |
ZNF765, isoform 2 |
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2.3.3.27.3.3 |
ZNF765, isoform 3 |
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2.3.3.27.4 |
ZNF468 [11] |
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2.3.3.27.4.1 |
ZNF468, isoform 1 |
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2.3.3.27.4.2 |
ZNF468, isoform 2 |
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2.3.3.28 |
Subfamily: ZNF76-like factors |
CCCATCATGCCTTGC |
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2.3.3.28.1 |
ZNF76 (ZNF523) [7] |
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2.3.3.28.1.1 |
ZNF76, isoform 1 |
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2.3.3.28.1.2 |
ZNF76, isoform 2 |
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2.3.3.28.2 |
ZNF143 (SBF, STAF) [7] |
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2.3.3.28.2.1 |
ZNF143, isoform 1 |
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2.3.3.28.2.2 |
ZNF143, isoform 2 |
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2.3.3.28.2.3 |
ZNF143, isoform 3 |
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2.3.3.29 |
Subfamily: ZNF652-like factors |
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2.3.3.29.1 |
ZNF652 (ZFP652) [9] |
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2.3.3.29.2 |
ZBTB47 (ZNF651) [9] |
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F |
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2.3.3.29.2.1 |
ZBTB47, isoform 1 |
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2.3.3.29.2.2 |
ZBTB47, isoform 2 |
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2.3.3.30 |
Subfamily: ZNF350-like factors |
TGGgttCAGactTTG |
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| |
2.3.3.30.1 |
ZNF350 (ZBRK1) [8] |
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2.3.3.30.2 |
ZNF577 [8] |
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2.3.3.30.2.1 |
ZNF577, isoform 1 |
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2.3.3.30.2.2 |
ZNF577, isoform 2 |
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2.3.3.30.3 |
ZNF649 [10] |
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2.3.3.30.4 |
ZNF613 [12] |
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2.3.3.30.4.1 |
ZNF613, isoform 1 |
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2.3.3.30.4.2 |
ZNF613, isoform 2 |
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2.3.3.30.5 |
ZNF614 [12] |
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2.3.3.30.5.1 |
ZNF614, isoform 1 |
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2.3.3.30.5.2 |
ZNF614, isoform 2 |
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2.3.3.31 |
Subfamily: ZNF642-like factors |
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| |
2.3.3.31.1 |
ZNF642 (ZFP69) [9] |
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2.3.3.31.2 |
ZNF643 (ZFP69B) [9] |
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2.3.3.31.2.1 |
ZNF643, isoform 1 |
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2.3.3.31.2.2 |
ZNF643, isoform 2 |
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2.3.3.31.3 |
ZNF570 [11] |
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2.3.3.31.3.1 |
ZNF570, isoform 1 |
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2.3.3.31.3.2 |
ZNF570, isoform 2 |
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2.3.3.31.4 |
ZNF583 [12] |
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2.3.3.32 |
Subfamily: ZNF679-like factors |
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| |
2.3.3.32.1 |
ZNF679 [9] |
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2.3.3.32.2 |
ZNF735 [9] |
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2.3.3.33 |
Subfamily: ZNF763-like factors |
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| |
2.3.3.33.1 |
ZNF763 [8] |
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| |
2.3.3.33.1.1 |
ZNF763, isoform 1 |
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2.3.3.33.1.2 |
ZNF763, isoform 2 |
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2.3.3.33.1.3 |
ZNF763, isoform 3 |
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2.3.3.33.2 |
ZNF844 [9] |
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2.3.3.33.3 |
ZNF625 [9] |
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2.3.3.33.3.1 |
ZNF625, isoform 1 |
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2.3.3.33.3.2 |
ZNF625, isoform 2 |
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2.3.3.33.4 |
ZNF669 [9] |
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2.3.3.33.4.1 |
ZNF669, isoform 1 |
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2.3.3.33.4.2 |
ZNF669, isoform 2 |
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2.3.3.33.5 |
ZNF670 [9] |
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2.3.3.33.6 |
ZNF124 (HZF-16) [8] |
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2.3.3.33.6.1 |
ZNF124, isoform 1 |
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2.3.3.33.6.2 |
ZNF124, isoform 2 |
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2.3.3.33.6.3 |
ZNF124, isoform 3 (HZF-16.2) |
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2.3.3.33.6.4 |
ZNF124, isoform 4 (HZF-16.1) |
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2.3.3.33.6.5 |
ZNF124, isoform 5 (HZF-16.1) |
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2.3.3.33.7 |
ZNF627 [11] |
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2.3.3.33.8 |
ZNF439 [11] |
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2.3.3.33.9 |
ZNF440 [12] |
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2.3.3.33.10 |
ZNF77 [12] |
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2.3.3.33.11 |
ZNF490 [13] |
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2.3.3.33.12 |
ZNF563 [12] |
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2.3.3.33.12.1 |
ZNF563, isoform 1 |
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2.3.3.33.12.2 |
ZNF563, isoform 2 |
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2.3.3.33.13 |
ZNF57 (ZNF424) [13] |
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2.3.3.33.14 |
ZNF69 [14] |
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2.3.3.33.14.1 |
ZNF69, isoform 1 |
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2.3.3.33.14.2 |
ZNF69, isoform 2 |
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2.3.3.33.15 |
ZNF136 [14] |
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2.3.3.33.16 |
ZNF564 [15] |
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2.3.3.33.17 |
ZNF20 (KOX13) [15] |
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2.3.3.33.18 |
ZNF878 [15] |
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2.3.3.33.19 |
ZNF555 [15] |
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2.3.3.33.19.1 |
ZNF555, isoform 1 |
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2.3.3.33.19.2 |
ZNF555, isoform 2 |
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2.3.3.33.19.3 |
ZNF555, isoform 3 |
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2.3.3.34 |
Subfamily: ZNF3-like factors |
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2.3.3.34.1 |
ZNF3 (KOX25) [8] |
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2.3.3.34.1.1 |
ZNF3, isoform 1 |
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2.3.3.34.1.2 |
ZNF3, isoform 2 |
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2.3.3.34.2 |
ZNF397 (ZSCAN15) [9] |
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2.3.3.34.2.1 |
ZNF397, isoform 1 (ZNF397-fu) |
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2.3.3.34.2.2 |
ZNF397, isoform 2 |
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2.3.3.34.2.3 |
ZNF397, isoform 3 (ZNF397-nf) |
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2.3.3.35 |
Subfamily: ZNF620-like factors |
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2.3.3.35.1 |
ZNF620 [8] |
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2.3.3.35.1.1 |
ZNF620, isoform 1 |
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2.3.3.35.1.2 |
ZNF620, isoform 2 |
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2.3.3.35.2 |
ZNF621 [7] |
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2.3.3.35.2.1 |
ZNF621, isoform 1 |
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2.3.3.35.2.2 |
ZNF621, isoform 2 |
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2.3.3.35.3 |
ZNF566 [8] |
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2.3.3.35.3.1 |
ZNF566, isoform 1 |
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2.3.3.35.3.2 |
ZNF566, isoform 2 |
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2.3.3.35.4 |
ZNF619 [10] |
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2.3.3.35.4.1 |
ZNF619, isoform 1 |
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2.3.3.35.4.2 |
ZNF619, isoform 2 |
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2.3.3.35.4.3 |
ZNF619, isoform 3 |
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2.3.3.35.4.4 |
ZNF619, isoform 4 |
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2.3.3.35.5 |
ZNF383 [11] |
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2.3.3.35.6 |
ZNF829 [10] |
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2.3.3.35.6.1 |
ZNF829, isoform 1 |
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2.3.3.35.6.2 |
ZNF829, isoform 2 |
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2.3.3.35.6.3 |
ZNF829, isoform 3 |
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2.3.3.35.7 |
ZNF582 [10] |
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2.3.3.36 |
Subfamily: ZNF324 factors |
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2.3.3.36.1 |
ZNF324A [9] |
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2.3.3.36.2 |
ZNF324B [9] |
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2.3.3.36.2.1 |
ZNF324B, isoform 1 |
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2.3.3.36.2.2 |
ZNF324B, isoform 2 |
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2.3.3.37 |
Subfamily: ZNF362-like factors |
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2.3.3.37.1 |
ZNF362 [6] |
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2.3.3.37.2 |
ZNF384 (CAGH1, CIZ, NMP4, TNRC1) [8] |
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2.3.3.37.2.1 |
ZNF384, isoform 1 |
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2.3.3.37.2.2 |
ZNF384, isoform 2 |
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2.3.3.37.2.3 |
ZNF384, isoform 3 |
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2.3.3.38 |
Subfamily: ZNF282-like factors |
TCCACCCC |
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2.3.3.38.1 |
ZNF282 (HUB1) [5] |
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2.3.3.38.1.1 |
ZNF282, isoform 1 |
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2.3.3.38.1.2 |
ZNF282, isoform 2 |
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2.3.3.38.2 |
ZNF398 (ZER6) [9] |
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2.3.3.38.2.1 |
ZNF398, isoform 1 (p71) |
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2.3.3.38.2.2 |
ZNF398, isoform 2 (p52) |
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2.3.3.39 |
Subfamily: ZNF764-like factors |
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2.3.3.39.1 |
ZNF764 [7] |
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2.3.3.39.1.1 |
ZNF764, isoform 1 |
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2.3.3.39.1.2 |
ZNF764, isoform 2 |
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2.3.3.39.2 |
ZNF785 [7] |
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2.3.3.39.2.1 |
ZNF785, isoform 1 |
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2.3.3.39.2.2 |
ZNF785, isoform 2 |
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2.3.3.39.3 |
ZNF771 [8] |
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2.3.3.40 |
Subfamily: ZNF177-like factors |
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2.3.3.40.1 |
ZNF177 [7] |
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2.3.3.40.1.1 |
ZNF177, isoform 1 |
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2.3.3.40.1.2 |
ZNF177, isoform 2 |
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2.3.3.40.1.3 |
ZNF177, isoform 3 |
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2.3.3.40.2 |
ZNF891 [8] |
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2.3.3.40.3 |
ZNF333 [10] |
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2.3.3.40.3.1 |
ZNF333, isoform 1 |
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2.3.3.40.3.2 |
ZNF333, isoform 2 |
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2.3.3.40.3.3 |
ZNF333, isoform 3 |
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2.3.3.41 |
Subfamily: ZNF32-like factors |
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2.3.3.41.1 |
ZNF32 (KOX30, Zfp637) [7] |
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2.3.3.41.2 |
ZIK1 (ZNF762) [9] |
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2.3.3.41.2.1 |
ZIK1, isoform 1 |
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2.3.3.41.2.2 |
ZIK1, isoform 2 |
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2.3.3.41.2.3 |
ZIK1, isoform 3 |
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2.3.3.42 |
Subfamily: ZNF773-like factors |
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2.3.3.42.1 |
ZNF773 (ZNF419B) [9] |
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2.3.3.42.1.1 |
ZNF773, isoform 1 |
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2.3.3.42.1.2 |
ZNF773, isoform 2 |
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2.3.3.42.2 |
ZNF419 (ZNF419A) [11] |
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2.3.3.42.2.1 |
ZNF419, isoform 1 |
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2.3.3.42.2.2 |
ZNF419, isoform 2 |
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2.3.3.42.2.3 |
ZNF419, isoform 3 |
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2.3.3.42.2.4 |
ZNF419, isoform 4 |
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2.3.3.42.2.5 |
ZNF419, isoform 5 |
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2.3.3.42.2.6 |
ZNF419, isoform 6 |
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2.3.3.43 |
Subfamily: ZNF558-like factors |
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2.3.3.43.1 |
ZNF558 [9] |
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2.3.3.43.1.1 |
ZNF558, isoform 1 |
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2.3.3.43.1.2 |
ZNF558, isoform 2 |
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2.3.3.43.2 |
ZNF557 [10] |
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2.3.3.43.2.1 |
ZNF557, isoform 1 |
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2.3.3.43.2.2 |
ZNF557, isoform 2 |
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2.3.3.44 |
Subfamily: ZNF302-like factors |
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2.3.3.44.1 |
ZNF302 (ZNF135L, ZNF140L, ZNF327) [7] |
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2.3.3.44.1.1 |
ZNF302, isoform 1 |
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2.3.3.44.1.2 |
ZNF302, isoform 2 |
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2.3.3.44.2 |
ZNF2 (ZNF661) [9] |
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2.3.3.44.2.1 |
ZNF2, isoform 1 |
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2.3.3.44.2.2 |
ZNF2, isoform 2 |
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2.3.3.44.2.3 |
ZNF2, isoform 3 |
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2.3.3.44.2.4 |
ZNF2, isoform 4 |
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2.3.3.44.3 |
ZNF181 [11] |
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2.3.3.44.3.1 |
ZNF181, isoform 1 |
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2.3.3.44.3.2 |
ZNF181, isoform 2 |
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2.3.3.44.3.3 |
ZNF181, isoform 3 |
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2.3.3.44.4 |
ZNF140 [10] |
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2.3.3.44.4.1 |
ZNF140, isoform 1 |
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2.3.3.44.4.2 |
ZNF140, isoform 2 |
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2.3.3.45 |
Subfamily: ZNF562-like factors |
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2.3.3.45.1 |
ZNF562 [8] |
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2.3.3.45.1.1 |
ZNF562, isoform 1 |
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2.3.3.45.1.2 |
ZNF562, isoform 2 |
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2.3.3.45.3 |
ZNF561 [12] |
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2.3.3.45.3.1 |
ZNF561, isoform 1 |
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2.3.3.45.3.2 |
ZNF561, isoform 2 |
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2.3.3.45.4 |
ZNF559 [13] |
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2.3.3.45.4.1 |
ZNF559, isoform 1 |
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2.3.3.45.4.2 |
ZNF559, isoform 2 |
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2.3.3.45.5 |
ZNF846 [14] |
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2.3.3.45.5.1 |
ZNF846, isoform 1 |
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2.3.3.45.5.2 |
ZNF846, isoform 2 |
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2.3.3.46 |
Subfamily: ZXD-factors |
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2.3.3.46.1 |
ZXDA [10] |
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2.3.3.46.2 |
ZXDB [10] |
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2.3.3.46.3 |
ZXDC (ZXDL) [10] |
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2.3.3.46.3.1 |
ZXDC, isoform 1 |
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2.3.3.46.3.2 |
ZXDC, isoform 2 |
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2.3.3.46.3.3 |
ZXDC, isoform 3 (ZXDC2) |
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2.3.3.47 |
Subfamily: ZNF222-like factors |
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2.3.3.47.1 |
ZNF222 [10] |
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2.3.3.47.1.1 |
ZNF222, isoform 1 |
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2.3.3.47.1.2 |
ZNF222, isoform 2 |
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2.3.3.47.2 |
ZNF223 [10] |
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2.3.3.47.3 |
ZNF230 (FDZF2) [10] |
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2.3.3.47.4 |
ZNF155 [12] |
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2.3.3.47.4.1 |
ZNF155, isoform 1 |
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2.3.3.47.4.2 |
ZNF155, isoform 2 |
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2.3.3.47.5 |
ZNF221 [15] |
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2.3.3.47.6 |
ZNF224 (BMZF2, KOX22, ZNF233, ZNF255, ZNF27) [18] |
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2.3.3.47.7 |
ZNF225 [18] |
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2.3.3.47.8 |
ZNF284 (ZNF284L) [15] |
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2.3.3.47.9 |
ZNF235 (ZFP93, ZNF270) [16] |
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2.3.3.47.9.1 |
ZNF235, isoform 1 |
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2.3.3.47.9.2 |
ZNF235, isoform 2 |
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2.3.3.47.10 |
ZNF45 (KOX5, ZNF13) [18] |
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2.3.3.47.11 |
ZNF229 [18] |
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2.3.3.47.11.1 |
ZNF229, isoform 1 |
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2.3.3.47.11.2 |
ZNF229, isoform 2 |
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| |
2.3.3.47.12 |
ZNF227 [19] |
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| |
2.3.3.47.12.1 |
ZNF227, isoform 1 |
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2.3.3.47.12.2 |
ZNF227, isoform 2 |
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2.3.3.47.13 |
ZNF226 [19] |
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2.3.3.47.13.1 |
ZNF226, isoform 1 |
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2.3.3.47.13.2 |
ZNF226, isoform 2 |
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| |
2.3.3.47.14 |
ZNF234 (ZNF269) [19] |
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2.3.3.48 |
Subfamily: ZNF736-like factors |
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2.3.3.48.1 |
ZNF736 [10] |
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2.3.3.48.2 |
ZNF727 [11] |
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2.3.3.49 |
Subfamily: ZNF286 factors |
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2.3.3.49.1 |
ZNF286A [10] |
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2.3.3.49.1.1 |
ZNF286A, isoform 1 |
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2.3.3.49.1.2 |
ZNF286A, isoform 2 |
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2.3.3.49.2 |
ZNF286B (ZNF286C, ZNF286L) [10] |
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2.3.3.50 |
Subfamily: CTCF-like factors |
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2.3.3.50.1 |
CTCF [11] |
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2.3.3.50.1.1 |
CTCF, isoform 1 |
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2.3.3.50.1.2 |
CTCF, isoform 2 |
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2.3.3.50.2 |
CTCFL (CTCF-T, BORIS) [11] |
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2.3.3.50.2.1 |
CTCFL, isoform 1 |
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2.3.3.50.2.2 |
CTCFL, isoform 2 |
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2.3.3.50.2.3 |
CTCFL, isoform 3 |
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2.3.3.50.2.4 |
CTCFL, isoform 4 |
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2.3.3.50.2.5 |
CTCFL, isoform 5 |
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2.3.3.50.2.6 |
CTCFL, isoform 6 |
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2.3.3.50.2.7 |
CTCFL, isoform 7 |
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2.3.3.50.2.8 |
CTCFL, isoform 8 |
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2.3.3.50.2.9 |
CTCFL, isoform 9 |
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2.3.3.50.2.10 |
CTCFL, isoform 10 |
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2.3.3.50.2.11 |
CTCFL, isoform 11 |
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2.3.3.51 |
Subfamily: ZNF366-like factors |
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2.3.3.51.1 |
ZNF366 [11] |
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2.3.3.51.2 |
ZNF710 [11] |
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2.3.3.52 |
Subfamily: ZNF322-like factors |
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2.3.3.52.1 |
ZNF322A (ZNF322, ZNF388, ZNF489, ZFP322A) [11] |
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2.3.3.53 |
Subfamily: ZNF548-like factors |
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2.3.3.53.1 |
ZNF548 [11] |
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2.3.3.53.1.1 |
ZNF548, isoform 1 |
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2.3.3.53.1.2 |
ZNF548, isoform 2 |
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2.3.3.53.2 |
ZNF776 [11] |
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2.3.3.54 |
Subfamily: ZNF460-like factors |
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2.3.3.54.1 |
ZNF460 (ZNF272) [11] |
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2.3.3.54.1.1 |
ZNF460, isoform 1 |
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2.3.3.54.1.2 |
ZNF460, isoform 2 |
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2.3.3.54.2 |
ZNF264 [13] |
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2.3.3.54.3 |
ZNF805 [13] |
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2.3.3.54.3.1 |
ZNF805, isoform 1 |
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2.3.3.54.3.2 |
ZNF805, isoform 2 |
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2.3.3.54.4 |
ZNF543 [13] |
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2.3.3.54.5 |
ZNF599 [14] |
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2.3.3.54.5.1 |
ZNF599, isoform 1 |
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2.3.3.54.5.2 |
ZNF599, isoform 2 |
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2.3.3.55 |
Subfamily: ZNF146-like factors |
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2.3.3.55.1 |
ZNF146 [10] |
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2.3.3.55.2 |
ZNF260 (ZFP260) [13] |
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2.3.3.56 |
Subfamily: ZNF214-like factors |
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2.3.3.56.1 |
ZNF214 (BAZ1) [11] |
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2.3.3.56.2 |
ZNF285 (ZNF285A) [11] |
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2.3.3.56.2.1 |
ZNF285, isoform 1 |
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2.3.3.56.2.2 |
ZNF285, isoform 2 |
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2.3.3.56.3 |
ZNF233 [12] |
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2.3.3.57 |
Subfamily: ZNF479-like factors |
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2.3.3.57.1 |
ZNF479 [12] |
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2.3.3.57.2 |
ZNF716 [12] |
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2.3.3.58 |
Subfamily: ZNF180-like factors |
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2.3.3.58.1 |
ZNF180 [12] |
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2.3.3.58.1.1 |
ZNF180, isoform 1 |
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2.3.3.58.1.2 |
ZNF180, isoform 2 |
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2.3.3.58.1.3 |
ZNF180, isoform 3 |
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2.3.3.58.1.4 |
ZNF180, isoform 4 |
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2.3.3.58.2 |
ZNF544 [13] |
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2.3.3.58.3 |
ZNF436 (Zfp46) [12] |
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2.3.3.58.4 |
ZNF572 [12] |
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2.3.3.58.5 |
ZNF774 [12] |
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2.3.3.58.6 |
ZSCAN2 (ZFP29, ZNF854) [14] |
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2.3.3.58.6.1 |
ZSCAN2, isoform 1 |
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2.3.3.58.6.2 |
ZSCAN2, isoform 3 |
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2.3.3.58.6.3 |
ZSCAN2, isoform 4 |
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2.3.3.59 |
Subfamily: ZNF100-like factors |
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2.3.3.59.1 |
ZNF100 [12] |
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2.3.3.59.2 |
ZNF430 [12] |
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2.3.3.59.3 |
ZNF431 [13] |
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2.3.3.59.4 |
ZNF730 [12] |
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2.3.3.59.5 |
ZNF714 [14] |
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2.3.3.59.5.1 |
ZNF714, isoform 1 |
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2.3.3.59.5.2 |
ZNF714, isoform 2 |
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2.3.3.59.5.3 |
ZNF714, isoform 3 |
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2.3.3.59.6 |
ZNF675 (TIZ) [15] |
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2.3.3.60 |
Subfamily: ZNF98-like factors |
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2.3.3.60.1 |
ZNF98 (ZNF739) [13] |
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2.3.3.60.2 |
ZNF492 (ZNF115) [13] |
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2.3.3.61 |
Subfamily: ZNF343-like factors |
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2.3.3.61.1 |
ZNF343 [12] |
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2.3.3.61.1.1 |
ZNF343, isoform 1 |
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2.3.3.61.1.2 |
ZNF343, isoform 2 |
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2.3.3.61.1.3 |
ZNF343, isoform 3 |
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2.3.3.61.2 |
HKR1 (ZNF875) [13] |
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2.3.3.61.2.1 |
HKR1, isoform 1 |
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2.3.3.61.2.2 |
HKR1, isoform 2 |
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2.3.3.61.3 |
ZNF169 [13] |
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2.3.3.61.4 |
ZNF133 (ZNF150) [15] |
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2.3.3.61.4.1 |
ZNF133, isoform 1 |
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2.3.3.61.4.2 |
ZNF133, isoform 2 |
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2.3.3.61.4.3 |
ZNF133, isoform 3 |
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2.3.3.61.4.4 |
ZNF133, isoform 4 |
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2.3.3.61.4.5 |
ZNF133, isoform 5 |
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2.3.3.62 |
Subfamily: ZFP2-like factors |
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| |
2.3.3.62.1 |
ZFP2 (ZNF751) [13] |
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2.3.3.62.2 |
ZNF71 (EZFIT) [13] |
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2.3.3.62.3 |
ZNF568 [15] |
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2.3.3.62.3.1 |
ZNF568, isoform 1 |
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2.3.3.62.3.2 |
ZNF568, isoform 2 |
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2.3.3.62.3.3 |
ZNF568, isoform 3 |
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2.3.3.63 |
Subfamily: ZFP30-like factors |
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2.3.3.63.1 |
ZFP30 (ZNF745) [13] |
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2.3.3.63.2 |
ZFP82 (ZNF545) [13] |
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2.3.3.63.3 |
ZFP14 (ZNF531) [13] |
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2.3.3.64 |
Subfamily: ZNF354A-like factors |
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2.3.3.64.1 |
ZNF354A (EZNF, HKL1, TCF17) [13] |
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2.3.3.64.2 |
ZNF354B [13] |
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2.3.3.65 |
Subfamily: ZFX/ZFY factors |
AGGCCC |
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2.3.3.65.1 |
ZFX [13] |
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2.3.3.65.1.1 |
ZFX, isoform 1 |
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2.3.3.65.1.2 |
ZFX, isoform 2 |
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2.3.3.65.1.3 |
ZFX, isoform 3 |
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2.3.3.65.2 |
ZFY [13] |
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2.3.3.65.2.1 |
ZFY, isoform 1 |
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2.3.3.65.2.2 |
ZFY, isoform 2 |
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2.3.3.65.2.3 |
ZFY, isoform 3 |
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2.3.3.66 |
Subfamily: ZNF689-like factors |
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2.3.3.66.1 |
ZNF689 [12] |
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2.3.3.66.2 |
ZNF672 [14] |
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2.3.3.66.2.1 |
ZNF672, isoform 1 |
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2.3.3.66.2.2 |
ZNF672, isoform 2 |
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2.3.3.67 |
Subfamily: ZFN283-like factors |
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| |
2.3.3.67.1 |
ZNF283 (HZF19) [15] |
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2.3.3.67.2 |
ZNF345 (HZF10) [15] |
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2.3.3.67.3 |
ZNF404 [15] |
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2.3.3.67.4 |
ZNF540 [17] |
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2.3.3.67.4.1 |
ZNF540, isoform 1 |
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2.3.3.67.4.2 |
ZNF540, isoform 2 |
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2.3.3.67.4.3 |
ZNF540, isoform 4 |
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2.3.3.67.5 |
ZNF571 [17] |
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2.3.3.67.6 |
ZNF30 (KOX28) [18] |
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2.3.3.67.6.1 |
ZNF30, isoform 1 |
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2.3.3.67.6.2 |
ZNF30, isoform 2 |
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2.3.3.67.6.3 |
ZNF30, isoform 3 |
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2.3.3.67.7 |
ZNF420 [19] |
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2.3.3.67.7.1 |
ZNF420, isoform 1 |
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2.3.3.67.7.2 |
ZNF420, isoform 2 |
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2.3.3.67.8 |
ZNF573 [19] |
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2.3.3.67.8.1 |
ZNF573, isoform 1 |
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2.3.3.67.8.2 |
ZNF573, isoform 2 |
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2.3.3.67.8.3 |
ZNF573, isoform 3 |
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2.3.3.67.8.4 |
ZNF573, isoform 4 |
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2.3.3.67.9 |
ZNF607 [20] |
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2.3.3.67.9.1 |
ZNF607, isoform 1 |
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2.3.3.67.9.2 |
ZNF607, isoform 2 |
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2.3.3.67.9.3 |
ZNF607, isoform 3 |
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| |
2.3.3.67.10 |
ZNF546 (ZNF49) [22] |
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2.3.3.67.11 |
ZNF780A [17] |
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| |
2.3.3.67.11.1 |
ZNF780A, isoform 1 |
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2.3.3.67.11.2 |
ZNF780A, isoform 2 |
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2.3.3.67.11.3 |
ZNF780A, isoform 3 |
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| |
2.3.3.67.12 |
ZNF780B (ZNF779) [23] |
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| |
2.3.3.68 |
Subfamily: ZFN81-like factors |
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| |
2.3.3.68.1 |
ZNF81 (KOX32) [12] |
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2.3.3.68.2 |
ZNF175 [15] |
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| |
2.3.3.68.3 |
ZNF41 [18] |
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| |
2.3.3.68.3.1 |
ZNF41, isoform 1 |
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| |
2.3.3.68.3.2 |
ZNF41, isoform 2 |
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| |
2.3.3.68.3.3 |
ZNF41, isoform 3 |
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2.3.3.68.3.4 |
ZNF41, isoform 4 |
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2.3.3.68.3.5 |
ZNF41, isoform 5 |
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2.3.3.68.3.6 |
ZNF41, isoform 6 |
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| |
2.3.3.68.3.7 |
ZNF41, isoform 7 |
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| |
2.3.3.68.3.8 |
ZNF41, isoform 8 |
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| |
2.3.3.68.4 |
ZNF484 [19] |
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| |
2.3.3.68.4.1 |
ZNF484, isoform 1 |
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2.3.3.68.4.2 |
ZNF484, isoform 2 |
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2.3.3.68.4.3 |
ZNF484, isoform 3 |
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| |
2.3.3.68.5 |
ZNF585B [21] |
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2.3.3.68.6 |
ZNF585A [22] |
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| |
2.3.3.68.6.1 |
ZNF585A, isoform 1 |
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2.3.3.68.6.2 |
ZNF585A, isoform 2 |
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| |
2.3.3.69 |
Subfamily: ZFN25-like factors |
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|
| |
2.3.3.69.1 |
ZNF25 (KOX19) [12] |
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| |
2.3.3.69.1.1 |
ZNF25, isoform 1 |
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| |
2.3.3.69.1.2 |
ZNF25, isoform 2 |
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| |
2.3.3.69.2 |
ZNF157 [12] |
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| |
2.3.3.69.3 |
ZFP37 [12] |
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| |
2.3.3.69.3.1 |
ZFP37, isoform 1 |
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| |
2.3.3.69.3.2 |
ZFP37, isoform 2 |
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| |
2.3.3.69.3.3 |
ZFP37, isoform 3 |
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| |
2.3.3.69.4 |
ZNF567 [15] |
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2.3.3.69.4.1 |
ZNF567, isoform 1 |
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2.3.3.69.4.2 |
ZNF567, isoform 2 |
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2.3.3.69.4.3 |
ZNF567, isoform 3 |
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2.3.3.69.5 |
ZNF782 [15] |
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2.3.3.69.6 |
ZNF33A (KOX31, ZNF11, ZNF11A, ZNF33) [16] |
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2.3.3.69.6.1 |
ZNF33A, isoform 1 |
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2.3.3.69.6.2 |
ZNF33A, isoform 2 |
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2.3.3.69.6.3 |
ZNF33A, isoform 3 |
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2.3.3.69.7 |
ZNF33B (KOX2, ZNF11B) [16] |
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2.3.3.70 |
Subfamily: ZFN26-like factors |
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2.3.3.70.1 |
ZNF26 (KOX20) [13] |
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2.3.3.70.2 |
ZNF268 [24] |
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2.3.3.70.2.1 |
ZNF268, isoform 1 (ZNF268a) |
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2.3.3.70.2.2 |
ZNF268, isoform 2 (ZNF268s) |
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2.3.3.70.2.3 |
ZNF268, isoform 3 (ZNF268c) |
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2.3.3.70.2.4 |
ZNF268, isoform 4 (ZNF268d) |
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2.3.3.70.2.5 |
ZNF268, isoform 5 (ZNF268e) |
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2.3.3.70.2.6 |
ZNF268, isoform 6 (ZNF268f) |
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2.3.3.70.2.7 |
ZNF268, isoform 7 (ZNF268g) |
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2.3.3.71 |
Subfamily: ZFN300-like factors |
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2.3.3.71.1 |
ZNF300 [12] |
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2.3.3.71.1.1 |
ZNF300, isoform 1 |
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2.3.3.71.1.2 |
ZNF300, isoform 2 (ZNF300B) |
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2.3.3.71.1.3 |
ZNF300, isoform 3 |
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2.3.3.71.1.4 |
ZNF300, isoform 4 |
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2.3.3.71.2 |
ZNF605 [17] |
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2.3.3.71.2.1 |
ZNF605, isoform 1 |
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2.3.3.71.2.2 |
ZNF605, isoform 2 |
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2.3.3.72 |
Subfamily: ZFN813-like factors |
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2.3.3.72.1 |
ZNF813 [14] |
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2.3.3.72.2 |
ZNF860 [14] |
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2.3.3.72.3 |
ZNF611 [17] |
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2.3.3.72.3.1 |
ZNF611, isoform 1 |
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2.3.3.72.3.2 |
ZNF611, isoform 2 |
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2.3.3.72.4 |
ZNF600 [20] |
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2.3.3.72.5 |
ZNF808 [24] |
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2.3.3.72.5.1 |
ZNF808, isoform 1 |
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2.3.3.72.5.2 |
ZNF808, isoform 2 |
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2.3.3.72.6 |
ZNF761 [19] |
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2.3.3.72.7 |
ZNF845 [27] |
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2.3.3.73 |
Subfamily: ZNF816A-like factors |
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2.3.3.73.1 |
ZNF816A [15] |
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2.3.3.73.2 |
ZNF28 (KOX24) [18] |
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2.3.3.73.2.1 |
ZNF28, isoform 1 |
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2.3.3.73.2.2 |
ZNF28, isoform 2 |
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2.3.3.74 |
Subfamily: ZNF442-like factors |
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2.3.3.74.1 |
ZNF442 [16] |
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2.3.3.74.1.1 |
ZNF442, isoform 1 |
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2.3.3.74.1.2 |
ZNF442, isoform 2 |
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2.3.3.74.2 |
ZNF823 (ZFP36) [16] |
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2.3.3.74.2.1 |
ZNF823, isoform 1 |
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2.3.3.74.2.2 |
ZNF823, isoform 2 |
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2.3.3.74.3 |
ZNF44 (GIOT2, KOX7, ZNF55, ZNF58) [17] |
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2.3.3.74.3.1 |
ZNF44, isoform 1 |
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2.3.3.74.3.2 |
ZNF44, isoform 2 |
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2.3.3.74.3.3 |
ZNF44, isoform 3 |
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2.3.3.74.4 |
ZNF799 (ZNF842) [18] |
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2.3.3.74.4.1 |
ZNF799, isoform 1 |
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2.3.3.74.4.2 |
ZNF799, isoform 2 |
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2.3.3.74.5 |
ZNF443 [19] |
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2.3.3.75 |
Subfamily: ZNF432-like factors |
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2.3.3.75.1 |
ZNF432 [16] |
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2.3.3.75.2 |
ZNF615 [19] |
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2.3.3.75.2.1 |
ZNF615, isoform 1 |
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2.3.3.75.2.2 |
ZNF615, isoform 2 |
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2.3.3.75.2.3 |
ZNF615, isoform 3 |
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2.3.3.76 |
Subfamily: ZNF665-like factors |
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2.3.3.76.1 |
ZNF665 (ZFP160L) [18] |
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2.3.3.76.1.1 |
ZNF665, isoform 1 |
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2.3.3.76.1.2 |
ZNF665, isoform 2 |
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2.3.3.76.2 |
ZNF160 [20] |
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2.3.3.76.2.1 |
ZNF160, isoform 1 |
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2.3.3.76.2.2 |
ZNF160, isoform 2 |
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2.3.3.76.3 |
ZNF347 (ZNF1111) [20] |
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2.3.3.76.3.1 |
ZNF347, isoform 1 |
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2.3.3.76.3.2 |
ZNF347, isoform 2 |
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2.3.3.77 |
Subfamily: ZNF595-like factors |
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2.3.3.77.1 |
ZNF595 [18] |
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2.3.3.77.2 |
ZNF721 [30] |
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2.3.3.77.2.1 |
ZNF721, isoform 1 |
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2.3.3.77.2.2 |
ZNF721, isoform 2 |
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2.3.3.78 |
Subfamily: ZNF14-like factors |
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2.3.3.78.1 |
ZNF14 (GIOT4, KOX6) [19] |
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2.3.3.78.2 |
ZNF709 [19] |
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2.3.3.79 |
Subfamily: ZNF841-like factors |
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2.3.3.79.1 |
ZNF841 [23] |
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2.3.3.79.1.1 |
ZNF841, isoform 1 |
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2.3.3.79.1.2 |
ZNF841, isoform 2 |
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2.3.3.79.1.3 |
ZNF841, isoform 3 |
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2.3.3.79.2 |
ZNF836 [25] |
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2.3.3.79.3 |
ZNF616 [21] |
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2.3.3.80 |
Subfamily: ZNF99-like factors |
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2.3.3.80.1 |
ZNF99 [30] |
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2.3.3.80.2 |
ZNF729 [35] |
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2.3.3.81 |
Subfamily: ZNF12-like factors |
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2.3.3.81.1 |
ZNF12 (GIOT3, KOX3, ZNF325) [15] |
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2.3.3.81.1.1 |
ZNF12, isoform 1 |
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2.3.3.81.1.2 |
ZNF12, isoform 2 |
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2.3.3.81.1.3 |
ZNF12, isoform 3 |
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2.3.3.81.1.4 |
ZNF12, isoform 4 |
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2.3.3.81.1.5 |
ZNF12, isoform 5 |
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2.3.3.81.2 |
RBAK (ZNF769) [16] |
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2.3.3.81.2.1 |
RBAK, isoform 1 |
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2.3.3.81.2.2 |
RBAK, isoform 2 |
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2.3.3.0 |
Subfamily: unclassified |
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2.3.3.0.1 |
ZFP161 (ZBTB14, ZNF478) |
CTACCTGCACAGTTCACGGA |
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2.3.3.0.3 |
ZNF496 (ZKSCAN17, Zfp496) |
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2.3.3.0.3.1 |
ZNF496, isoform 1 |
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2.3.3.0.3.2 |
ZNF496, isoform 2 |
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2.3.3.0.6 |
ZNF274 (neurotrophin receptor-interacting factor homolog; ZKSCAN19) |
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2.3.3.0.6.1 |
ZNF274, isoform 1 |
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2.3.3.0.6.2 |
ZNF274, isoform 2 |
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2.3.3.0.6.3 |
ZNF274, isoform 3 |
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2.3.3.0.6.4 |
ZNF274, isoform 4 |
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2.3.3.0.7 |
ZNF200 (ZNFMF) |
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2.3.3.0.7.1 |
ZNF200, isoform 1 |
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2.3.3.0.7.2 |
ZNF200, isoform 2 |
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2.3.3.0.7.3 |
ZNF200, isoform 3 |
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2.3.3.0.9 |
OSR2 |
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2.3.3.0.9.1 |
OSR2, isoform 1 |
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2.3.3.0.9.2 |
OSR2, isoform 2 |
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2.3.3.0.9.3 |
OSR2, isoform 3 |
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2.3.3.0.10 |
ZNF781 |
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2.3.3.0.10.1 |
ZNF781, isoform 1 |
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2.3.3.0.10.2 |
ZNF781, isoform 2 |
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2.3.3.0.11 |
ZNF114 |
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2.3.3.0.11.1 |
ZNF114, isoform 1 |
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2.3.3.0.11.2 |
ZNF114, isoform 2 |
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2.3.3.0.12 |
ZNF589 (SZF1) |
GGGtaaCAG |
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2.3.3.0.12.1 |
ZNF589, isoform 1 |
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2.3.3.0.12.2 |
ZNF589, isoform 2 (SZF1-2) |
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2.3.3.0.12.3 |
ZNF589, isoform 3 (SZF1-1) |
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2.3.3.0.13 |
ZNF22 (KOX15, KROX26,Zfp422) |
CAATG |
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2.3.3.0.14 |
ZNF713 |
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2.3.3.0.15 |
ZSCAN16 (ZNF392, ZNF435) |
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2.3.3.0.16 |
ZNF793 |
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2.3.3.0.16.1 |
ZNF793, isoform 1 |
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2.3.3.0.16.2 |
ZNF793, isoform 2 |
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2.3.3.0.16.3 |
ZNF793, isoform 3 |
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2.3.3.0.17 |
ZFP41 |
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2.3.3.0.18 |
ZNF215 (BAZ2, ZKSCAN11) |
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2.3.3.0.18.1 |
ZNF215, isoform 1 |
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2.3.3.0.18.2 |
ZNF215, isoform 2 |
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2.3.3.0.20 |
ZNF18 (KOX11, ZKSCAN6, ZNF535, Zfp18, Zfp535) |
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2.3.3.0.20.1 |
ZNF18, isoform 1 |
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2.3.3.0.20.2 |
ZNF18, isoform 2 |
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2.3.3.0.21 |
WT1 |
CGCCCCCGC |
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2.3.3.0.21.1 |
WT1, isoform 1 |
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2.3.3.0.21.2 |
WT1, isoform 2 (WT1 I −KTS) |
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2.3.3.0.21.3 |
WT1, isoform 3 (WT1 I) |
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2.3.3.0.21.4 |
WT1, isoform 4 (WT1 −KTS) |
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2.3.3.0.21.5 |
WT1, isoform 6 |
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2.3.3.0.21.6 |
WT1, isoform 7 |
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2.3.3.0.21.7 |
WT1, isoform 8 |
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2.3.3.0.21.8 |
WT1-del2 |
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2.3.3.0.21.9 |
WT1 I-del2 |
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2.3.3.0.21.10 |
WT1, isoform 9 |
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2.3.3.0.22 |
ZNF137P (ZNF137) |
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2.3.3.0.23 |
PRDM6 (PFM3) |
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2.3.3.0.23.1 |
PRDM6, isoform 1 |
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2.3.3.0.23.2 |
PRDM6, isoform 2 (B) |
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2.3.3.0.23.3 |
PRDM6, isoform 3 (A) |
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2.3.3.0.24 |
ZNF444 (EZF2, ZSCAN17, Zfp444) |
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| |
2.3.3.0.24.1 |
ZNF444, isoform 1 |
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2.3.3.0.24.2 |
ZNF444, isoform 2 |
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2.3.3.0.25 |
ZNF641 (Zfp641) |
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| |
2.3.3.0.25.1 |
ZNF641, isoform 1 |
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2.3.3.0.25.2 |
ZNF641, isoform 2 |
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2.3.3.0.25.3 |
ZNF641, isoform 3 |
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2.3.3.0.25.4 |
ZNF641, isoform 4 |
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| |
2.3.3.0.26 |
ZNF746 (PARIS, Zfp746) |
TATTTTT |
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| |
2.3.3.0.26.1 |
ZNF746, isoform 1 |
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2.3.3.0.26.2 |
ZNF746, isoform 2 |
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| |
2.3.3.0.26.3 |
ZNF746, isoform 3 |
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| |
2.3.3.0.27 |
ZIM2 (ZNF656) |
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| |
2.3.3.0.28 |
ZBTB44 (BTBD15, ZNF851) |
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| |
2.3.3.0.28.1 |
ZBTB44, isoform 1 |
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2.3.3.0.28.2 |
ZBTB44, isoform 2 |
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2.3.3.0.28.3 |
ZBTB44, isoform 3 |
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| |
2.3.3.0.28.4 |
ZBTB44, isoform 4 |
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2.3.3.0.30 |
ZNF576 |
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| |
2.3.3.0.31 |
ZNF655 (VIK) [6] |
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| |
2.3.3.0.31.1 |
ZNF655, isoform 1 |
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| |
2.3.3.0.31.2 |
ZNF655, isoform 2 |
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|
|
| |
2.3.3.0.31.3 |
ZNF655, isoform 3 |
|
|
|
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|
| |
2.3.3.0.31.4 |
ZNF655, isoform 4 |
|
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|
| |
2.3.3.0.32 |
ZNF165 (ZPF165, ZSCAN7) [6] |
|
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|
| |
2.3.3.0.34 |
ZNF131 (Zfp131) [6] |
|
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|
| |
2.3.3.0.34.1 |
ZNF131, isoform 1 |
|
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|
| |
2.3.3.0.34.2 |
ZNF131, isoform 2 |
|
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|
|
|
| |
2.3.3.0.35 |
PRDM14 [6] |
GGTCTCTAA |
|
|
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|
| |
2.3.3.0.37 |
ZNF575 (Zfp575) [6] |
|
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| |
2.3.3.0.38 |
ZBTB49 [7] |
 |
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|
| |
2.3.3.0.38.1 |
ZBTB49, isoform 1 |
|
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| |
2.3.3.0.38.2 |
ZBTB49, isoform 2 |
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| |
2.3.3.0.38.3 |
ZBTB49, isoform 3 |
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| |
2.3.3.0.38.4 |
ZBTB49, isoform 4 |
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| |
2.3.3.0.38.5 |
ZBTB49, isoform 5 |
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| |
2.3.3.0.39 |
ZNF691 (Zfp691) [7] |
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| |
2.3.3.0.39.1 |
ZNF691, isoform 1 |
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| |
2.3.3.0.39.2 |
ZNF691, isoform 2 |
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| |
2.3.3.0.39.3 |
ZNF691, isoform 3 |
|
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| |
2.3.3.0.40 |
ZNF394 (ZKSCAN14, Zfp94, Zfp99) [7] |
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| |
2.3.3.0.40.1 |
ZNF394, isoform 1 |
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| |
2.3.3.0.40.2 |
ZNF394, isoform 2 |
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|
| |
2.3.3.0.41 |
ZNF449 (ZSCAN19, Zfp449) [7] |
|
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|
| |
2.3.3.0.41.1 |
ZNF449, isoform 1 |
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| |
2.3.3.0.41.2 |
ZNF449, isoform 2 |
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| |
2.3.3.0.41.3 |
ZNF449, isoform 3 |
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| |
2.3.3.0.42 |
ZNF498 (ZSCAN25, Zfp498) [7] |
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|
| |
2.3.3.0.42.1 |
ZNF498, isoform 1 |
|
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| |
2.3.3.0.42.2 |
ZNF498, isoform 2 |
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| |
2.3.3.0.42.3 |
ZNF498, isoform 3 |
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| |
2.3.3.0.42.4 |
ZNF498, isoform 4 |
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| |
2.3.3.0.43 |
ZSCAN30 (ZNF397OS) [7] |
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| |
2.3.3.0.43.1 |
ZSCAN30, isoform 1 |
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| |
2.3.3.0.43.2 |
ZSCAN30, isoform 2 |
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| |
2.3.3.0.45 |
ZNF80 [7] |
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| |
2.3.3.0.46 |
ZNF514 [7] |
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| |
2.3.3.0.47 |
ZSCAN21 (ZFP38, ZNF38) [7] |
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| |
2.3.3.0.51 |
ZNF707 [7] |
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| |
2.3.3.0.54 |
MYNN (OSZF, ZBTB31) [8] |
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| |
2.3.3.0.54.1 |
MYNN, isoform 1 |
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| |
2.3.3.0.54.2 |
MYNN, isoform 2 |
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| |
2.3.3.0.54.3 |
MYNN, isoform 3 |
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| |
2.3.3.0.54.4 |
MYNN, isoform 4 (m4b) |
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| |
2.3.3.0.55 |
ZBTB24 (ZNF450) [8] |
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| |
2.3.3.0.55.1 |
ZBTB24, isoform 1 (ZNF450-xbb1) |
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|
| |
2.3.3.0.55.2 |
ZBTB24, isoform 2 (ZNF450-xbb2) |
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|
| |
2.3.3.0.57 |
ZFP92 [8] |
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| |
2.3.3.0.58 |
ZNF205 (ZNF210) [8] |
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| |
2.3.3.0.59 |
ZNF837 [8] |
|
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|
| |
2.3.3.0.60 |
ZNF202 (ZKSCAN10, Zfp202) [8] |
GGGGTGGGGT |
|
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|
| |
2.3.3.0.60.1 |
ZNF202, isoform α (1) |
|
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| |
2.3.3.0.60.2 |
ZNF202, isoform β (2) |
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| |
2.3.3.0.61 |
ZNF789 [8] |
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| |
2.3.3.0.61.1 |
ZNF789, isoform 1 |
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| |
2.3.3.0.61.2 |
ZNF789, isoform 2 |
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| |
2.3.3.0.61.3 |
ZNF789, isoform 3 |
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| |
2.3.3.0.62 |
ZNF662 [8] |
|
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|
| |
2.3.3.0.62.1 |
ZNF662, isoform 1 |
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| |
2.3.3.0.62.2 |
ZNF662, isoform 2 |
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| |
2.3.3.0.63 |
ZNF554 [8] |
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| |
2.3.3.0.64 |
ZNF506 [8] |
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| |
2.3.3.0.64.1 |
ZNF506, isoform 1 |
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| |
2.3.3.0.64.2 |
ZNF506, isoform 2 |
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|
| |
2.3.3.0.65 |
ZNF66 [8] |
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| |
2.3.3.0.67 |
ZNF584 [8] |
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| |
2.3.3.0.68 |
ZNF684 [8] |
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|
| |
2.3.3.0.69 |
ZNF187 (ZSCAN26, SRE-ZBP) [8] |
|
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|
| |
2.3.3.0.69.1 |
ZNF187, isoform 1 |
|
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|
| |
2.3.3.0.69.2 |
ZNF187, isoform 2 |
|
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| |
2.3.3.0.70 |
ZSCAN22 (HKR2, ZNF50) [8] |
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|
| |
2.3.3.0.71 |
ZNF550 [8] |
|
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|
| |
2.3.3.0.71.1 |
ZNF550, isoform 1 |
|
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|
| |
2.3.3.0.71.2 |
ZNF550, isoform 2 |
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|
| |
2.3.3.0.72 |
ZFP1 (ZNF475) [8] |
|
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|
| |
2.3.3.0.72.1 |
ZFP1, isoform 1 |
|
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| |
2.3.3.0.72.2 |
ZFP1, isoform 2 |
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|
| |
2.3.3.0.73 |
ZNF73 (ZNF186) [8] |
|
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| |
2.3.3.0.74 |
ZBTB16 (PLZF, ZNF145) [9] |
TAAAGTTTGATCTGTTC |
|
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|
| |
2.3.3.0.74.1 |
ZBTB16, isoform PLZFB |
|
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| |
2.3.3.0.74.2 |
ZBTB16, isoform PLZFA |
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| |
2.3.3.0.75 |
GTF3A (TFIIIA) [9] |
|
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|
| |
2.3.3.0.75.1 |
GTF3A, isoform 1 |
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| |
2.3.3.0.75.2 |
GTF3A, isoform 2 |
|
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| |
2.3.3.0.76 |
ZFP64 [9] |
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| |
2.3.3.0.76.1 |
ZFP64, isoform 1 |
|
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| |
2.3.3.0.76.2 |
ZFP64, isoform 2 |
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| |
2.3.3.0.76.3 |
ZFP64, isoform 3 [3+10] |
|
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| |
2.3.3.0.76.4 |
ZFP64, isoform 4 (ZNF338) [3+10] |
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| |
2.3.3.0.76.5 |
ZFP64, isoform 5 |
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| |
2.3.3.0.76.6 |
ZFP64, isoform 6 |
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| |
2.3.3.0.77 |
ZNF358 [9] |
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| |
2.3.3.0.78 |
ZNF696 [9] |
|
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| |
2.3.3.0.79 |
ZNF263 (FPM315, ZKSCAN12, Zfp263) [9] |
GGGAGGAGG |
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| |
2.3.3.0.80 |
ZNF556 [9] |
|
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| |
2.3.3.0.81 |
ZNF192 (ZKSCAN8, LD5-1) [9] |
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|
| |
2.3.3.0.81.1 |
ZNF192, isoform 1 |
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| |
2.3.3.0.81.2 |
ZNF192, isoform 2 |
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| |
2.3.3.0.82 |
ZNF391 [9] |
|
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| |
2.3.3.0.83 |
ZNF239 (HOK-2, MOK-2, Zfp239) [9] |
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| |
2.3.3.0.84 |
ZNF664 (ZFOC1, ZNF196, Zfp664) [9] |
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|
| |
2.3.3.0.87 |
ZNF501 (ZNF52) [9] |
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|
| |
2.3.3.0.87.1 |
ZNF501, isoform 1 |
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| |
2.3.3.0.87.2 |
ZNF501, isoform 2 |
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| |
2.3.3.0.89 |
ZNF610 [9] |
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|
| |
2.3.3.0.89.1 |
ZNF610, isoform 1 |
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| |
2.3.3.0.89.2 |
ZNF610, isoform 2 |
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| |
2.3.3.0.91 |
ZNF660 [10] |
|
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| |
2.3.3.0.92 |
GZF1 (ZBTB23, ZNF336) [10] |
TGCGCGTCTATA |
|
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|
|
|
| |
2.3.3.0.92.1 |
GZF1, isoform 1 |
|
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| |
2.3.3.0.92.2 |
GZF1, isoform 2 |
|
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| |
2.3.3.0.93 |
ZNF408 (PFM14, PRDM17, Zfp408) [10] |
|
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|
| |
2.3.3.0.94 |
ZNF648 (Zfp648) [10] |
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| |
2.3.3.0.95 |
ZNF768 (Zfp768) [10] |
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| |
2.3.3.0.96 |
ZNF517 [10] |
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| |
2.3.3.0.97 |
ZNF547 [10] |
|
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|
| |
2.3.3.0.97.1 |
ZNF547, isoform 1 |
|
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|
| |
2.3.3.0.97.2 |
ZNF547, isoform 2 |
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| |
2.3.3.0.98 |
ZNF766 [10] |
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| |
2.3.3.0.99 |
ZNF677 [10] |
|
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| |
2.3.3.0.100 |
ZNF35 [11] |
|
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| |
2.3.3.0.101 |
ZNF483 (ZKSCAN16) [11] |
|
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|
| |
2.3.3.0.101.1 |
ZNF483, isoform 1 |
|
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|
| |
2.3.3.0.101.2 |
ZNF483, isoform 2 [0] |
|
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|
| |
2.3.3.0.102 |
ZBTB48 (HKR3, ZNF855) [11] |
|
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|
| |
2.3.3.0.103 |
ZNF275 (Zfp275) [11] |
|
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|
| |
2.3.3.0.103.1 |
ZNF275, isoform 1 |
|
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|
| |
2.3.3.0.103.2 |
ZNF275, isoform 2 |
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|
| |
2.3.3.0.104 |
ZIM3 (ZNF657) [11] |
|
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|
| |
2.3.3.0.106 |
ZNF596 (ZNF272) [11] |
|
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|
| |
2.3.3.0.106.1 |
ZNF596, isoform 1 |
|
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|
| |
2.3.3.0.106.2 |
ZNF596, isoform 2 |
|
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|
| |
2.3.3.0.106.3 |
ZNF596, isoform 3 |
|
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|
| |
2.3.3.0.107 |
ZNF253 (BMZF1, ZNF411) [11] |
|
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|
|
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|
| |
2.3.3.0.107.1 |
ZNF253, isoform 1 |
|
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|
| |
2.3.3.0.107.2 |
ZNF253, isoform 2 |
|
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|
| |
2.3.3.0.108 |
ZNF355P (ZnFP01, ZNF834) [11] |
|
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|
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|
| |
2.3.3.0.109 |
ZNF682 [11] |
|
|
|
|
|
|
|
| |
2.3.3.0.109.1 |
ZNF682, isoform 1 |
|
|
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|
| |
2.3.3.0.109.2 |
ZNF682, isoform 2 |
|
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|
| |
2.3.3.0.109.3 |
ZNF682, isoform 3 |
|
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|
| |
2.3.3.0.110 |
ZNF141 (D4S90) [11] |
|
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|
| |
2.3.3.0.111 |
ZNF718 [11] |
|
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|
|
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|
| |
2.3.3.0.111.1 |
ZNF718, isoform 1 |
|
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|
| |
2.3.3.0.111.2 |
ZNF718, isoform 2 |
|
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|
| |
2.3.3.0.112 |
ZNF121 (ZNF20) [11] |
|
|
|
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|
| |
2.3.3.0.113 |
ZNF485 [11] |
|
|
|
|
|
|
|
| |
2.3.3.0.113.1 |
ZNF485, isoform 1 |
|
|
|
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|
| |
2.3.3.0.113.2 |
ZNF485, isoform 2 |
|
|
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|
| |
2.3.3.0.114 |
ZNF354C (KID3) [11] |
CCACC |
|
|
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|
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|
| |
2.3.3.0.115 |
ZNF586 [11] |
|
|
|
|
|
|
|
| |
2.3.3.0.115.1 |
ZNF586, isoform 1 |
|
|
|
|
|
| |
2.3.3.0.115.2 |
ZNF586, isoform 2 |
|
|
|
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|
| |
2.3.3.0.115.3 |
ZNF586, isoform 3 |
|
|
|
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|
| |
2.3.3.0.118 |
ZNF10 (KOX1) [11] |
|
|
|
|
|
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|
| |
2.3.3.0.119 |
ZNF19 (KOX12) [10] |
|
|
|
|
|
|
|
| |
2.3.3.0.119.1 |
ZNF19, isoform 1 |
|
|
|
|
|
| |
2.3.3.0.119.2 |
ZNF19, isoform 2 |
|
|
|
|
|
| |
2.3.3.0.120 |
ZSCAN12 (ZNF305, ZNF96) [11] |
|
|
|
|
|
|
|
| |
2.3.3.0.121 |
ZNF70 (N27C7-1) [11] |
|
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|
|
< |
|
| |
2.3.3.0.122 |
ZNF79 [11] |
|
|
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|
|
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|
| |
2.3.3.0.123 |
ZBTB40 [12] |
|
|
|
|
|
|
|
| |
2.3.3.0.123.1 |
ZBTB40, isoform 1 |
|
|
|
|
|
| |
2.3.3.0.123.2 |
ZBTB40, isoform 2 |
|
|
|
|
|
| |
2.3.3.0.124 |
ZBTB11 [12] |
|
|
|
|
|
|
|
| |
2.3.3.0.125 |
ZNF454 (Zfp454) [12] |
|
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|
|
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|
| |
2.3.3.0.126 |
ZNF154 [12] |
|
|
|
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|
| |
2.3.3.0.127 |
ZNF416 [12] |
|
|
|
|
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|
| |
2.3.3.0.130 |
ZNF34 (KOX32) [12] |
|
|
|
|
|
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|
| |
2.3.3.0.132 |
ZNF74 (ZNF520) [12] |
|
|
|
|
|
|
|
| |
2.3.3.0.132.1 |
ZNF74, isoform 1 |
|
|
|
|
|
| |
2.3.3.0.132.2 |
ZNF74, isoform 2 |
|
|
|
|
|
| |
2.3.3.0.132.3 |
ZNF74, isoform 3 |
|
|
|
|
|
| |
2.3.3.0.132.4 |
ZNF74, isoform 4 |
|
|
|
|
|
| |
2.3.3.0.132.5 |
ZNF74, isoform 5 |
|
|
|
|
|
| |
2.3.3.0.133 |
ZNF415 [12] |
|
|
|
|
|
|
|
| |
2.3.3.0.133.1 |
ZNF415, isoform 1 (ZNF415-3) |
|
|
|
|
|
| |
2.3.3.0.133.2 |
ZNF415, isoform 2 (ZNF415-2) |
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2.3.3.0.133.3 |
ZNF415, isoform 3 (ZNF415-1) |
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2.3.3.0.133.4 |
ZNF415, isoform 4 (ZNF415-4) |
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2.3.3.0.133.5 |
ZNF415, isoform 5 (ZNF415-5) |
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2.3.3.0.133.6 |
ZNF415, isoform 6 |
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2.3.3.0.134 |
ZNF480 [12] |
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2.3.3.0.134.1 |
ZNF480, isoform 1 |
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2.3.3.0.134.2 |
ZNF480, isoform 2 |
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2.3.3.0.134.3 |
ZNF480, isoform 3 |
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2.3.3.0.135 |
ZNF578 [12] |
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2.3.3.0.136 |
ZNF320 [12] |
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2.3.3.0.137 |
ZNF626 [12] |
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2.3.3.0.137.1 |
ZNF626, isoform 1 |
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2.3.3.0.137.2 |
ZNF626, isoform 2 |
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2.3.3.0.137.3 |
ZNF626, isoform 3 |
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2.3.3.0.139 |
ZNF257 (BMZF4) [13] |
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2.3.3.0.139.1 |
ZNF257, isoform 1 |
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2.3.3.0.139.2 |
ZNF257, isoform 2 |
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2.3.3.0.139.3 |
ZNF257, isoform 3 |
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2.3.3.0.139.4 |
ZNF257, isoform 4 |
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2.3.3.0.140 |
ZNF680 [12] |
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2.3.3.0.140.1 |
ZNF680, isoform 1 |
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2.3.3.0.140.2 |
ZNF680, isoform 2 [0] |
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2.3.3.0.142 |
ZNF331 (RITA, ZNF361, ZNF463) [12] |
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2.3.3.0.143 |
ZNF461 (GIOT1) [12] |
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2.3.3.0.143.1 |
ZNF461, isoform 1 |
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2.3.3.0.143.2 |
ZNF461, isoform 2 |
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2.3.3.0.144 |
ZNF527 [12] |
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2.3.3.0.144.1 |
ZNF527, isoform 1 |
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2.3.3.0.144.2 |
ZNF527, isoform 2 |
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2.3.3.0.145 |
ZNF529 [12] |
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2.3.3.0.146 |
ZNF565 [12] |
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2.3.3.0.146.1 |
ZNF565, isoform 1 |
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2.3.3.0.146.2 |
ZNF565, isoform 2 |
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2.3.3.0.148 |
ZNF329 (Zfp329) [12] |
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2.3.3.0.149 |
ZFP90 (ZNF756) [13] |
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2.3.3.0.149.1 |
ZFP90, isoform 1 |
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2.3.3.0.149.2 |
ZFP90, isoform 2 |
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2.3.3.0.150 |
ZNF317 [13] |
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2.3.3.0.150.1 |
ZNF317, isoform 1 (ZNF317-1) |
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2.3.3.0.150.2 |
ZNF317, isoform 2 (ZNF317-2) |
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2.3.3.0.150.3 |
ZNF317, isoform 3 (ZNF317-3) |
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2.3.3.0.150.4 |
ZNF317, isoform 4 (ZNF317-4) |
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2.3.3.0.152 |
MZF1 (ZNF42, ZSCAN6) [13] |
AGTGGGGA |
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2.3.3.0.152.1 |
MZF1A (MZF1B) |
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2.3.3.0.152.2 |
MZF1B-C |
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2.3.3.0.152.3 |
MZF1B, isoform 3 |
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2.3.3.0.153 |
ZNF530 [13] |
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2.3.3.0.154 |
ZNF737 (ZNF102) [13] |
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2.3.3.0.155 |
ZNF273 [13] |
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2.3.3.0.155.1 |
ZNF273, isoform 1 |
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2.3.3.0.155.2 |
ZNF273, isoform 2 |
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2.3.3.0.156 |
ZNF695 [13] |
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2.3.3.0.156.1 |
ZNF695, isoform 1 |
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2.3.3.0.156.2 |
ZNF695, isoform 2 |
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2.3.3.0.156.3 |
ZNF695, isoform 3 |
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2.3.3.0.156.4 |
ZNF695, isoform 4 |
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2.3.3.0.157 |
ZNF879 (Zfp879) [13] |
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2.3.3.0.158 |
ZNF790 [13] |
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2.3.3.0.159 |
ZNF167 (ZKSCAN7, ZNF448, ZNF64, Zfp167) [13] |
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2.3.3.0.159.1 |
ZNF167, isoform 1 |
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2.3.3.0.159.2 |
ZNF167, isoform 2 |
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2.3.3.0.160 |
ZNF250 (ZNF647, Zfp647) [13] |
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2.3.3.0.160.1 |
ZNF250, isoform 1 |
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2.3.3.0.160.2 |
ZNF250, isoform 2 |
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2.3.3.0.160.3 |
ZNF250, isoform 3 |
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2.3.3.0.161 |
ZNF623 [13] |
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2.3.3.0.161.1 |
ZNF623, isoform 1 |
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2.3.3.0.161.2 |
ZNF623, isoform 2 |
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2.3.3.0.162 |
ZFP3 (ZNF752) [13] |
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2.3.3.0.163 |
ZNF883 [13] |
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2.3.3.0.164 |
ZNF117 (HPF9) [13] |
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2.3.3.0.165 |
ZNF266 [14] |
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2.3.3.0.166 |
ZNF311 (ZFP31) [14] |
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2.3.3.0.167 |
ZNF551 (KOX23) [14] |
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2.3.3.0.167.1 |
ZNF551, isoform 1 |
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2.3.3.0.167.2 |
ZNF551, isoform 2 |
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2.3.3.0.167.3 |
ZNF551, isoform 3 |
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2.3.3.0.168 |
ZNF497 [14] |
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2.3.3.0.169 |
ZSCAN10 (ZNF206) [14] |
GCGCATGCGC |
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2.3.3.0.169.1 |
ZSCAN10, isoform 1 |
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2.3.3.0.169.2 |
ZSCAN10, isoform 2 |
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2.3.3.0.169.3 |
ZSCAN10, isoform 3 |
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2.3.3.0.173 |
ZNF880 [14] |
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2.3.3.0.173.1 |
ZNF880, isoform 1 |
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2.3.3.0.173.2 |
ZNF880, isoform 2 |
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2.3.3.0.174 |
ZNF287 (ZKSCAN13) [14] |
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2.3.3.0.175 |
ZNF502 [14] |
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2.3.3.0.176 |
ZNF835 [14] |
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2.3.3.0.177 |
ZNF560 [15] |
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2.3.3.0.179 |
ZNF667 [15] |
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2.3.3.0.180 |
ZNF549 [15] |
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2.3.3.0.180.1 |
ZNF549, isoform 1 |
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2.3.3.0.180.2 |
ZNF549, isoform 2 |
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2.3.3.0.181 |
ZNF708 (KOX8, ZNF15, ZNF15L1) [15] |
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2.3.3.0.182 |
ZNF254 (BMZF5, ZNF539, ZNF91L) [15] |
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2.3.3.0.182.1 |
ZNF254, isoform 1 |
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2.3.3.0.182.2 |
ZNF254, isoform 2 |
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2.3.3.0.183 |
ZNF676 [15] |
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2.3.3.0.184 |
ZNF90 [15] |
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2.3.3.0.185 |
ZNF678 [15] |
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2.3.3.0.186 |
ZNF267 [15] |
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2.3.3.0.188 |
ZNF83 (ZNF816B) [15] |
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2.3.3.0.188.1 |
ZNF83, isoform 1 |
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2.3.3.0.188.2 |
ZNF83, isoform 2 |
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2.3.3.0.189 |
ZNF528 [15] |
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2.3.3.0.189.1 |
ZNF528, isoform 1 |
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2.3.3.0.189.2 |
ZNF528, isoform 2 |
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2.3.3.0.190 |
ZNF7 (KOX4) [15] |
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2.3.3.0.190.1 |
ZNF7, isoform 1 |
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2.3.3.0.190.2 |
ZNF7, isoform 2 |
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2.3.3.0.190.3 |
ZNF7, isoform 3 |
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2.3.3.0.191 |
ZNF471 (ERP1) [15] |
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2.3.3.0.191.1 |
ZNF471, isoform 1 |
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2.3.3.0.191.2 |
ZNF471, isoform 2 |
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2.3.3.0.192 |
ZFP28 [15] |
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2.3.3.0.192.1 |
ZFP28, isoform 1 |
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2.3.3.0.192.2 |
ZFP28, isoform 2 |
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2.3.3.0.193 |
ZNF182 (KOX14, ZNF21) [15] |
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2.3.3.0.193.1 |
ZNF182, isoform 1 |
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2.3.3.0.193.2 |
ZNF182, isoform 2 |
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2.3.3.0.194 |
ZNF732 [16] |
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2.3.3.0.195 |
PRDM5 (PFM2) [16] |
GGAGAGCAGG |
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2.3.3.0.195.1 |
PRDM5, isoform 1 |
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2.3.3.0.195.2 |
PRDM5, isoform 2 |
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2.3.3.0.195.3 |
PRDM5, isoform 3 |
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2.3.3.0.195.4 |
PRDM5, isoform 4 |
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2.3.3.0.197 |
ZNF189 (Zfp189) [16] |
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2.3.3.0.197.1 |
ZNF189, isoform 1 |
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2.3.3.0.197.2 |
ZNF189, isoform 2 |
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2.3.3.0.197.3 |
ZNF189, isoform 3 (B2) |
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2.3.3.0.197.4 |
ZNF189, isoform 4 |
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2.3.3.0.198 |
ZNF85 (HTF1, HPF4) [16] |
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2.3.3.0.198.1 |
ZNF85, isoform 1 |
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2.3.3.0.198.2 |
ZNF85, isoform 2 |
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2.3.3.0.198.3 |
ZNF85, isoform 3 [0] |
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2.3.3.0.199 |
ZNF92 [16] |
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2.3.3.0.199.1 |
ZNF92, isoform 1 |
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2.3.3.0.199.2 |
ZNF92, isoform 2 |
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2.3.3.0.199.3 |
ZNF92, isoform 3 |
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2.3.3.0.200 |
ZNF681 [16] |
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2.3.3.0.200.1 |
ZNF681, isoform 1 |
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2.3.3.0.200.2 |
ZNF681, isoform 2 |
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2.3.3.0.201 |
ZNF724P [16] |
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2.3.3.0.202 |
ZNF135 (ZNF61, ZNF78L1) [16] |
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2.3.3.0.202.1 |
ZNF135, isoform 1 |
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2.3.3.0.202.2 |
ZNF135, isoform 2 |
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2.3.3.0.202.3 |
ZNF135, isoform 3 |
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2.3.3.0.202.4 |
ZNF135, isoform 4 |
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2.3.3.0.203 |
ZNF699 [16] |
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2.3.3.0.204 |
ZNF16 (KOX9) [17] |
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2.3.3.0.205 |
ZNF17 (HPF3, KOX10) [17] |
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2.3.3.0.205.1 |
ZNF17, isoform 1 |
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2.3.3.0.205.2 |
ZNF17, isoform 2 |
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2.3.3.0.205.3 |
ZNF17, isoform 3 |
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2.3.3.0.206 |
ZNF93 (ZNF505) [17] |
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2.3.3.0.206.1 |
ZNF93, isoform 1 |
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2.3.3.0.206.2 |
ZNF93, isoform 2 |
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2.3.3.0.206.3 |
ZNF93, isoform 3 |
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2.3.3.0.207 |
ZNF534 (KRBO3) [17] |
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2.3.3.0.207.1 |
ZNF534, isoform 1 |
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2.3.3.0.207.2 |
ZNF534, isoform 2 |
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2.3.3.0.208 |
ZNF470 (CZF-1) [17] |
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2.3.3.0.208.1 |
ZNF470, isoform 1 |
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2.3.3.0.208.2 |
ZNF470, isoform 2 |
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2.3.3.0.209 |
ZNF791 [17] |
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2.3.3.0.209.1 |
ZNF791, isoform 1 |
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2.3.3.0.209.2 |
ZNF791, isoform 2 |
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2.3.3.0.210 |
ZNF23 (KOX16, ZNF359, ZNF612, Zfp23, Zfp612) [17] |
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2.3.3.0.210.1 |
ZNF23, isoform 1 |
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2.3.3.0.210.2 |
ZNF23, isoform 2 |
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2.3.3.0.212 |
ZNF700 [18] |
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2.3.3.0.213 |
ZNF840 (ZNF840P) [18] |
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2.3.3.0.214 |
ZNF429 [18] |
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2.3.3.0.215 |
ZNF569 [18] |
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2.3.3.0.215.1 |
ZNF569, isoform 1 |
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2.3.3.0.215.2 |
ZNF569, isoform 2 |
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2.3.3.0.216 |
ZNF84 [19] |
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2.3.3.0.217 |
ZNF749 [19] |
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2.3.3.0.218 |
ZNF425 [19] |
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2.3.3.0.220 |
ZNF184 (Zfp184) [19] |
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2.3.3.0.221 |
ZNF441 [19] |
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2.3.3.0.221.1 |
ZNF441, isoform 1 |
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2.3.3.0.221.2 |
ZNF441, isoform 2 |
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2.3.3.0.224 |
ZNF433 [19] |
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2.3.3.0.224.1 |
ZNF433, isoform 1 |
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2.3.3.0.224.2 |
ZNF433, isoform 2 |
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2.3.3.0.225 |
ZNF337 [20] |
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2.3.3.0.225.1 |
ZNF337, isoform 1 |
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2.3.3.0.225.2 |
ZNF337, isoform 2 |
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2.3.3.0.226 |
ZNF726 [20] |
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2.3.3.0.226.1 |
ZNF726, isoform 1 |
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2.3.3.0.226.2 |
ZNF726, isoform 2 |
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2.3.3.0.226.3 |
ZNF726, isoform 3 |
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2.3.3.0.227 |
ZNF624 [21] |
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2.3.3.0.227.1 |
ZNF624, isoform 1 |
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2.3.3.0.227.2 |
ZNF624, isoform 2 |
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2.3.3.0.228 |
ZNF197 (ZKSCAN9, ZNF166) [22] |
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2.3.3.0.228.1 |
ZNF197, isoform 1 |
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2.3.3.0.228.2 |
ZNF197, isoform 2 |
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2.3.3.0.229 |
ZNF493 [22] |
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2.3.3.0.229.1 |
ZNF493, isoform 1 |
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2.3.3.0.229.2 |
ZNF493, isoform 2 |
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2.3.3.0.229.3 |
ZNF493, isoform 3 |
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2.3.3.0.230 |
ZNF43 (HTF6, KOX27, ZNF39, ZNF39L1) [22] |
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2.3.3.0.230.1 |
ZNF43, isoform 1 |
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2.3.3.0.230.2 |
ZNF43, isoform 2 |
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2.3.3.0.231 |
ZFP62 [23] |
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2.3.3.0.231.1 |
ZFP62, isoform 1 |
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2.3.3.0.231.2 |
ZFP62, isoform 2 |
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2.3.3.0.231.3 |
ZFP62, isoform 3 |
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2.3.3.0.232 |
ZNF594 (HZF18) [24] |
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2.3.3.0.233 |
ZNF107 (ZFD25, ZNF588) [25] |
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2.3.3.0.234 |
ZNF208 (ZNF91L) [34] |
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2.3.3.0.234.1 |
ZNF208, isoform 1 |
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2.3.3.0.234.2 |
ZNF208, isoform 2 |
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2.3.3.0.235 |
ZNF91 (HPF7, HTF10) [36] |
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2.3.3.0.235.1 |
ZNF91, isoform 1 |
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2.3.3.0.235.2 |
ZNF91, isoform 2 |
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2.3.3.0.237 |
ZNF852 [12] |
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2.3.3.0.238 |
ZNF728 [14] |
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2.3.4 |
Family: Factors with multiple dispersed zinc fingers |
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2.3.4.1 |
Subfamily: ZNF417-like factors |
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2.3.4.1.1 |
ZNF417 [1+12] |
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2.3.4.1.1.1 |
ZNF417, isoform 1 |
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2.3.4.1.1.2 |
ZNF417, isoform 2 |
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2.3.4.1.2 |
ZNF587 [1+12] |
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2.3.4.1.2.1 |
ZNF587, isoform 1 |
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2.3.4.1.2.2 |
ZNF587, isoform 2 |
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2.3.4.1.3 |
ZNF552 [2+7] |
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2.3.4.1.4 |
ZNF814 [1+22] |
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2.3.4.1.5 |
ZNF418 [1+15] |
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2.3.4.1.6 |
ZNF211 [1+11] |
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2.3.4.1.6.1 |
ZNF211, isoform 1 |
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2.3.4.1.6.2 |
ZNF211, isoform 2 |
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2.3.4.1.6.3 |
ZNF211, isoform 3 |
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2.3.4.1.6.4 |
ZNF211, isoform 4 |
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2.3.4.1.6.5 |
ZNF211, isoform 5 |
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2.3.4.1.6.6 |
ZNF211, isoform 6 |
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2.3.4.1.6.7 |
ZNF211, isoform 7 |
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2.3.4.1.6.8 |
ZNF211, isoform 8 |
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2.3.4.1.7 |
ZNF256 (BMZF3) [1+14] |
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2.3.4.1.7.1 |
ZNF256, isoform 1 |
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2.3.4.1.7.2 |
ZNF256, isoform 2 [14] |
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2.3.4.2 |
Subfamily: ZNF219-like factors |
CCCCCA |
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| |
2.3.4.2.1 |
ZNF219 (Zfp219) [2+1+2+1] |
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2.3.4.2.2 |
ZNF536 (Zfp536) [2+4+1+2] |
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2.3.4.2.3 |
ZNF516 (Zfp516) [2+5+1+1+1] |
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2.3.4.2.4 |
ZNF217 (ZABC1, Zfp217) [1+3+1+2] |
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2.3.4.3 |
Subfamily: Sal-like factors |
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2.3.4.3.1 |
SALL1 (Spalt-1, Sal-1, ZNF794) [2+3+2+2] |
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2.3.4.3.1.1 |
SALL1, isoform 1 |
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2.3.4.3.1.2 |
SALL1, isoform 2 |
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2.3.4.3.2 |
SALL2 (Spalt-2, Sal-2, ZNF795) [2+3+2] |
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2.3.4.3.2.1 |
SALL2, isoform 1 |
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2.3.4.3.2.2 |
SALL2, isoform 2 |
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2.3.4.3.3 |
SALL3 (Sal-3, ZNF796) [2+3+2+2] |
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2.3.4.3.3.1 |
SALL3, isoform 1 [2+3+2] |
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2.3.4.3.3.2 |
SALL3, isoform 2 [2+3+2] |
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2.3.4.3.3.3 |
SALL3, isoform 3 |
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2.3.4.3.3.4 |
SALL3, isoform 4 |
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2.3.4.3.4 |
SALL4 (ZNF797) [2+3+2+2] |
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2.3.4.3.4.1 |
SALL4A [2+3+2] |
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2.3.4.3.4.2 |
SALL4B [2] |
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2.3.4.4 |
Subfamily: Ikaros |
TTGGGAAT |
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2.3.4.4.1 |
IKZF1 (IK1, IKAROS, Lyf-1, ZNFN1A1) [4+2] |
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2.3.4.4.1.1 |
IKZF1, isoform Ik1 |
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2.3.4.4.1.2 |
IKZF1, isoform Ik2 [3+2] |
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2.3.4.4.1.3 |
IKZF1, isoform Ik3 [3+2] |
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2.3.4.4.1.4 |
IKZF1, isoform Ik4 [3+2] |
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2.3.4.4.1.5 |
IKZF1, isoform Ik5 [1+2] |
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2.3.4.4.1.6 |
IKZF1, isoform Ik6 [2] |
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2.3.4.4.1.7 |
IKZF1, isoform Ik7 [3+2] |
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2.3.4.4.1.8 |
IKZF1, isoform Ikx [3] |
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2.3.4.4.2 |
IKZF2 (HELIOS, ZNFN1A2) [4+2] |
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2.3.4.4.2.1 |
IKZF2, isoform 1 |
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2.3.4.4.2.2 |
IKZF2, isoform 2 [3+2] |
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2.3.4.4.2.3 |
IKZF2, isoform 3 [1+2+2] |
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2.3.4.4.2.4 |
IKZF2, isoform 4 [3+2] |
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2.3.4.4.2.5 |
IKZF2, isoform 5 [0] |
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2.3.4.4.2.6 |
IKZF2, isoform 6 [4] |
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2.3.4.4.2.7 |
IKZF2, isoform 7 [2+2] |
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2.3.4.4.2.8 |
IKZF2, isoform 8 [2] |
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2.3.4.4.3 |
IKZF3 (Aiolos, ZNFN1A3) [4+2] |
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2.3.4.4.3.1 |
IKZF3, isoform 1 (Aio-1) |
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2.3.4.4.3.2 |
IKZF3, isoform 2 (Aio-del4) [2+2] |
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2.3.4.4.3.3 |
IKZF3, isoform 3 (Aio-del5) [2+2] |
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2.3.4.4.3.4 |
IKZF3, isoform 4 (Aio-del6) |
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2.3.4.4.3.5 |
IKZF3, isoform 5 (Aio-del4,5) [1+2] |
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2.3.4.4.3.6 |
IKZF3, isoform 6 (Aio-del5,6) [3+2] |
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2.3.4.4.3.7 |
IKZF3, isoform 7 (Aio-del2) |
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2.3.4.4.3.8 |
IKZF3, isoform 8 (Aio-del2,5) [3+2] |
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2.3.4.4.3.9 |
IKZF3, isoform 9 (Aio-del3) [3+2] |
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2.3.4.4.3.10 |
IKZF3, isoform 10 (Aio-del3,4) [1+2] |
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2.3.4.4.3.11 |
IKZF3, isoform 11 (Aio-del3,4,5) [2] |
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2.3.4.4.3.12 |
IKZF3, isoform 12 (Aio-del3,4,5,6) [2] |
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2.3.4.4.3.13 |
IKZF3, isoform 13 (Aio-del4,5,6) [1+2] |
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2.3.4.4.3.14 |
IKZF3, isoform 14 (Aio-1-5a) [4] |
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2.3.4.4.3.15 |
IKZF3, isoform 15 (Aio-del4-5a) [2+2] |
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2.3.4.4.3.16 |
IKZF3, isoform 16 [2] |
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2.3.4.4.4 |
IKZF4 (EOS, ZNFN1A4) [4+2] |
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| |
2.3.4.4.4.1 |
IKZF4, isoform 1 |
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2.3.4.4.4.2 |
IKZF4, isoform 2 |
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2.3.4.4.5 |
IKZF5 (Pegasus, ZNFN1A5) [3+2] |
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2.3.4.5 |
Subfamily: HIV EP-factors |
GGGACTTTCC |
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| |
2.3.4.5.1 |
HIV-EP1 (ZNF40, PRDII-BF1, MBP-1, CIRIP, GAAP) [2+1+2] |
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F |
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2.3.4.5.1.1 |
HIV-EP1, isoform 1 |
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2.3.4.5.1.2 |
HIV-EP1, isoform 2 (Delta 2, GAAP-1) [2] |
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2.3.4.5.1.3 |
HIV-EP1, isoform 3 (GAAP-2) [2] |
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2.3.4.5.2 |
HIV-EP2 (MBP-2, ZNF40B) [2+2] |
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2.3.4.5.3 |
HIV-EP3 (KBP1, KRC, ZAS3) [2+1+2] |
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| |
2.3.4.5.3.1 |
HIV-EP3, isoform 1 (HIVEP3S) |
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2.3.4.5.3.2 |
HIV-EP3, isoform 2 |
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2.3.4.6 |
Subfamily: ZBTB1-like factors |
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| |
2.3.4.6.1 |
ZBTB1 [1+1+6] |
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| |
2.3.4.6.1.1 |
ZBTB1, isoform 1 |
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2.3.4.6.1.2 |
ZBTB1, isoform 2 [1+1+3] |
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| |
2.3.4.6.2 |
ZBTB2 (ZNF437) [1+3] |
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| |
2.3.4.6.3 |
ZBTB25 (KUP, ZNF46) [1+1] |
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| |
2.3.4.7 |
Subfamily: RLF-like factors |
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| |
2.3.4.7.1 |
RLF [1+5+1+2+4+1] |
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F |
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| |
2.3.4.7.2 |
ZNF292 (Zfp292) [1+5+1+1+2+4+1] |
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| |
2.3.4.7.2.1 |
ZNF292, isoform 1 |
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| |
2.3.4.7.2.2 |
ZNF292, isoform 2 |
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| |
2.3.4.7.3 |
ZNF654 [1+4] |
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| |
2.3.4.8 |
Subfamily: MAZ-like factors |
GGGGAGGG |
|
| |
2.3.4.8.1 |
MAZ (Zif87, ZNF801, Pur-1, SAF) [1+5] |
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| |
2.3.4.8.1.1 |
MAZ, isoform 1 (SAF-1) |
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| |
2.3.4.8.1.2 |
MAZ, isoform 2 (SAF-2) |
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| |
2.3.4.8.1.3 |
MAZ, isoform 3 (SAF-3) |
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| |
2.3.4.8.1.4 |
MAZ, isoform 4 [1] |
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| |
2.3.4.8.2 |
VEZF1 (DB1, ZNF161) [1+5] |
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| |
2.3.4.8.3 |
PATZ1 (RIAZ, ZBTB19, ZNF278, ZSG) [1+5+1] |
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| |
2.3.4.8.3.1 |
PATZ1, isoform 1 (C) |
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| |
2.3.4.8.3.2 |
PATZ1, isoform 2 (B) [1+4] |
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| |
2.3.4.8.3.3 |
PATZ1, isoform 3 (A) [1+4+1] |
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| |
2.3.4.8.3.4 |
PATZ1, isoform 4 (Short) [1+3] |
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| |
2.3.4.9 |
Subfamily: ZNF532-like factors |
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|
| |
2.3.4.9.1 |
ZNF532 (Zfp532) [1+6+3+2] |
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| |
2.3.4.9.2 |
ZNF592 (Zfp592) [2+6+3+2] |
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| |
2.3.4.9.3 |
ZNF687 (Zfp682) [1+5+2+2] |
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| |
2.3.4.9.3.1 |
ZNF687, isoform 1 |
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| |
2.3.4.9.3.2 |
ZNF687, isoform 2 [1+5+2] |
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|
| |
2.3.4.10 |
Subfamily: ZNF512-factors |
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|
| |
2.3.4.10.1 |
ZNF512 (Zfp512) [1+1+2] |
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|
| |
2.3.4.10.1.1 |
ZNF512, isoform 1 [1+1+2] |
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| |
2.3.4.10.1.2 |
ZNF512, isoform 2 [1+1+2] |
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| |
2.3.4.10.1.3 |
ZNF512, isoform 3 [1+1+2] |
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| |
2.3.4.10.2 |
ZNF512B (Zfp512b) [2+3+2] |
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|
F |
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2.3.4.11 |
Subfamily: ZNF658-factors |
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2.3.4.11.1 |
ZNF658 [5+19] |
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2.3.4.11.1.1 |
ZNF658, isoform 1 |
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2.3.4.11.1.2 |
ZNF658, isoform 2 [5+4] |
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2.3.4.11.2 |
ZNF658B [2+19] |
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2.3.4.12 |
Subfamily: ZNF423-like factors |
GCACCCAAGGGTGC |
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2.3.4.12.1 |
ZNF423 (OAZ, Zfp423) [1+7+5+7+10] |
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2.3.4.12.1.1 |
ZNF423, isoform 1 |
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2.3.4.12.1.2 |
ZNF423, isoform 2 |
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2.3.4.12.2 |
ZNF521 (EHZF, LIP3, Zfp521) [1+7+5+7+5+5] |
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2.3.4.13 |
Subfamily: ZNF639-like factors |
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2.3.4.13.1 |
ZNF639 (ZASC1, Zfp639) [4+4] |
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2.3.4.13.2 |
ZNF711 (CMPX1, ZNF6, Zfp711) [1+10] |
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2.3.4.13.2.1 |
ZNF711, isoform 1 |
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2.3.4.13.2.2 |
ZNF711, isoform 2 |
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2.3.4.13.2.3 |
ZNF711, isoform 3 |
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2.3.4.14 |
Subfamily: Evi-1-like factors |
ACAAGATAA |
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2.3.4.14.1 |
EVI-1 (MECOM) [7+3] |
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2.3.4.14.1.1 |
EVI-1, isoform 1 (Long, Evi-1a) |
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2.3.4.14.1.2 |
EVI-1, isoform 2 (Evi-1c, Mds1/Evi1) |
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2.3.4.14.1.3 |
EVI-1, isoform 9 (Mds1) |
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2.3.4.14.1.4 |
EVI-1, isoform 4 |
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2.3.4.14.1.5 |
EVI-1, isoform 5 |
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2.3.4.14.1.6 |
EVI-1, isoform 6 |
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2.3.4.14.1.7 |
EVI-1, isoform 7 |
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2.3.4.14.1.8 |
EVI-1, isoform 8 |
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2.3.4.14.2 |
PRDM16 (MEL1, PFM13) [7+3] |
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2.3.4.14.2.1 |
PRDM16, isoform 1 |
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2.3.4.14.2.2 |
PRDM16, isoform 2 (MEL1L) |
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2.3.4.14.2.3 |
PRDM16, isoform 3 |
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2.3.4.14.2.4 |
PRDM16, isoform 4 (MEL1S) |
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2.3.4.15 |
Subfamily: BCL11 |
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2.3.4.15.1 |
BCL11A (CTIP1, EVI9, ZNF856) [1+2+3] |
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2.3.4.15.1.1 |
BCL11A, isoform 1 (BCL11A-XL) |
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2.3.4.15.1.2 |
BCL11A, isoform 2 (BCL11A-L) [1+2] |
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2.3.4.15.1.3 |
BCL11A, isoform 3 (BCL11A-S) [1] |
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2.3.4.15.1.6 |
BCL11A, isoform 6 |
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2.3.4.15.1.7 |
BCL11A, isoform 7 |
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2.3.4.15.2 |
BCL11B (CTIP2, RIT1) [1+2+3] |
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2.3.4.15.2.1 |
BCL11B, isoform 1 |
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2.3.4.15.2.2 |
BCL11B, isoform 2 |
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2.3.4.15.3 |
ZNF296 (ZNF342, Zfp296) [1+2+3] |
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2.3.4.16 |
Subfamily: Insulinoma-associated proteins |
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2.3.4.16.1 |
INSM1 (IA-1) [2+1+2] |
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2.3.4.16.2 |
INSM2 (IA-6) [2+3] |
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2.3.4.17 |
Subfamily: Hypermethylated in Cancer proteins |
GGGTGCCCGG |
|
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2.3.4.17.1 |
HIC1 (ZBTB29) [1+4] |
 |
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F |
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2.3.4.17.1.1 |
HIC1, isoform 1 |
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2.3.4.17.1.2 |
HIC1, isoform 2 |
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2.3.4.17.2 |
HIC2 (HRG22, ZBTB30) [1+4] |
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2.3.4.17.2.1 |
HIC2, isoform 1 |
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2.3.4.17.2.2 |
HIC2, isoform 2 |
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2.3.4.18 |
Subfamily: ZNF518 |
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2.3.4.18.1 |
ZNF518A [4+1] |
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2.3.4.18.1.1 |
ZNF518A, isoform 1 |
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2.3.4.18.1.2 |
ZNF518A, isoform 2 [1] |
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2.3.4.18.2 |
ZNF518B (Zfp518b) [2+1] |
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2.3.4.19 |
Subfamily: Basonuclin |
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2.3.4.19.1 |
BNC1 [2+2+2] |
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2.3.4.19.2 |
BNC2 [1+1+2] |
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2.3.4.19.2.1 |
BNC2, isoform 1 |
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2.3.4.19.2.2 |
BNC2, isoform 2 [1+1] |
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2.3.4.20 |
Subfamily: TRERF1-like factors |
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2.3.4.20.1 |
TRERF1 (BCAR2, RAPA, TREP132) = 3.5.1.3.9 [1+1+1] |
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2.3.4.20.1.1 |
TRERF1, isoform 1 |
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2.3.4.20.1.2 |
TRERF1, isoform 2 |
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2.3.4.20.1.3 |
TRERF1, isoform 3 |
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2.3.4.20.1.4 |
TRERF1, isoform 4 |
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2.3.4.20.1.5 |
TRERF1, isoform 5 |
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2.3.4.20.2 |
ZNF541 (Zfp541) [3+1+1] = 3.5.1.3.10 |
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2.3.4.20.2.2 |
ZNF541, isoform 2 |
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2.3.4.20.2.3 |
ZNF541, isoform 3 |
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2.3.4.21 |
Subfamily: HINFP-like factors |
CGGACGTT |
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| |
2.3.4.21.1 |
HINFP (MIZF, ZNF743) [1+8] |
 |
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2.3.4.21.1.1 |
HINFP, isoform 1 [1+8] |
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2.3.4.21.1.2 |
HINFP, isoform 2 [1+8] |
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2.3.4.21.2 |
ZFAT (ZFAT1, ZNF406) [1+1+7+10] |
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2.3.4.21.2.1 |
ZFAT, isoform 1 (ZFAT-1) |
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2.3.4.21.2.2 |
ZFAT, isoform 2 (ZFAT-2, ZFAT-3) |
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2.3.4.21.2.3 |
ZFAT, isoform 3 (TR-ZFAT) [1+1+7+3] |
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2.3.4.21.2.4 |
ZFAT, isoform 4 [1+1+7+10] |
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2.3.4.22 |
Subfamily: ZNF526-like factors |
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2.3.4.22.1 |
ZNF526 (Zfp526) [1+2+1+9] |
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2.3.4.22.2 |
ZNF574 (Zfp574) [3+1+4+8+4] |
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2.3.4.22.2.1 |
ZNF574, isoform 1 |
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2.3.4.22.2.2 |
ZNF574, isoform 2 |
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2.3.4.23 |
Subfamily: ZNF319-like factors |
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2.3.4.23.1 |
ZNF319 (Zfp319) [3+13] |
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2.3.4.23.2 |
ZNF786 (Zfp786) [2+14] |
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2.3.4.23.2.1 |
ZNF786, isoform 1 |
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2.3.4.23.2.2 |
ZNF786, isoform 2 |
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2.3.4.24 |
Subfamily: ZNF134-like factors |
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2.3.4.24.1 |
ZNF134 [2+9] |
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2.3.4.24.1.1 |
ZNF134, isoform 1 |
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2.3.4.24.1.2 |
ZNF134, isoform 2 [9] |
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2.3.4.24.2 |
ZNF671 [1+9] |
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2.3.4.24.3 |
ZNF772 [2+8] |
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2.3.4.24.3.1 |
ZNF772, isoform 1 |
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2.3.4.24.3.2 |
ZNF772, isoform 2 |
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2.3.4.24.3.3 |
ZNF772, isoform 3 |
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2.3.4.24.4 |
ZNF792 [1+12] |
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2.3.4.25 |
Subfamily: ZNF37A-like factors |
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2.3.4.25.1 |
ZNF37A (KOX21, ZNF37) [1+11] |
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2.3.4.25.2 |
ZNF717 (KLF X17) [16+6] |
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2.3.4.25.3 |
ZNF248 (Zfp248) [1+7] |
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2.3.4.25.3.1 |
ZNF248, isoform 1 |
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2.3.4.25.3.2 |
ZNF248, isoform 2 |
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2.3.4.25.4 |
ZNF334 (Zfp334) [9+5] |
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2.3.4.25.5 |
ZNF382 (KS1, Zfp382) [1+9] |
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2.3.4.25.5.1 |
ZNF382, isoform 1 |
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2.3.4.25.5.2 |
ZNF382, isoform 2 |
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2.3.4.25.5.3 |
ZNF382, isoform 3 |
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2.3.4.25.6 |
ZNF510 [1+9] |
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2.3.4.0 |
Subfamily: unclassified |
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2.3.4.0.1 |
CASZ1 (CST, SRG, ZNF693) [3+1+1+3] |
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2.3.4.0.1.1 |
CASZ1, isoform 1 (hCASZ11) |
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2.3.4.0.1.2 |
CASZ1, isoform 2 (hCASZ5) [3+1] |
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2.3.4.0.2 |
ZNF335 (NIF-1, Zfp335) [1+8+4] |
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2.3.4.0.2.1 |
ZNF335, isoform 1 |
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2.3.4.0.2.2 |
ZNF335, isoform 2 |
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2.3.4.0.3 |
PRDM8 (PFM5) [1+2] |
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2.3.4.0.3.1 |
PRDM8, isoform 1 |
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2.3.4.0.3.2 |
PRDM8, isoform 2 [1] |
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2.3.4.0.4 |
WIZ (ZNF803) [4+2+1+1+1+1+1] |
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2.3.4.0.4.1 |
WIZ, isoform 1 |
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2.3.4.0.4.2 |
WIZ, isoform 2 [1+1+1+1+1] |
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2.3.4.0.4.3 |
WIZ, isoform 3 [1+1+1+1] |
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2.3.4.0.4.4 |
WIZ, isoform 4 [1+1+1+1+1] |
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2.3.4.0.5 |
ZNF469 [1+1+3] |
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F |
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2.3.4.0.6 |
ZFPM1 (FOG1, ZFN89A) = 2.7.2.0.1 [3+1] |
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2.3.4.0.7 |
ZBTB4 (KAISO-L1) [1+3+2] |
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2.3.4.0.8 |
ZBTB38 [2+3+5] |
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2.3.4.0.9 |
ZBTB39 [2+3+3] |
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2.3.4.0.10 |
ZNF295 (ZBTB21) [2+1+2+2+1] |
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2.3.4.0.10.1 |
ZNF295, isoform 1 (ZNF295L) |
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2.3.4.0.10.2 |
ZNF295, isoform 2 (ZNF295S) [2+2+1] |
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2.3.4.0.11 |
ZNF827 [3+4+2] |
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2.3.4.0.11.1 |
ZNF827, isoform 1 |
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2.3.4.0.11.2 |
ZNF827, isoform 2 |
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2.3.4.0.11.3 |
ZNF827, isoform 3 |
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2.3.4.0.12 |
PRDM13 (PFM10) [1+3] |
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2.3.4.0.13 |
ZNF646 (PFM10, Zfp646) [1+3] |
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F |
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2.3.4.0.13.1 |
ZNF646, isoform 1 |
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2.3.4.0.13.2 |
ZNF646, isoform 2 |
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2.3.4.0.14 |
ZNF579 (Zfp579) [3+2+3] |
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2.3.4.0.15 |
RREB1 (FINB, Zep-1, LZ321) [3+2+1+5+1+1+2] |
CCCCAAACACCCCC |
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| |
2.3.4.0.15.1 |
RREB1, isoform 1 (β) |
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2.3.4.0.15.2 |
RREB1, isoform 2 (α) [3+2+1+5+2+1+2] |
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2.3.4.0.15.3 |
RREB1, isoform 3 (γ) [3+2+1+5+2+1] |
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2.3.4.0.15.4 |
RREB1, isoform 4 [1+1+2] |
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2.3.4.0.15.5 |
RREB1, isoform 5 (δ) [3+2+1+5+1] |
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2.3.4.0.15.6 |
RREB1, isoform 6 (ε) [3+2] |
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| |
2.3.4.0.16 |
PRDM2 (G3B, MTB-ZF, MTE-BP, KMT8, RIZ) [2+1+3+1+1] |
GTCATATGAC |
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| |
2.3.4.0.16.1 |
PRDM2, isoform 1 (RIZ1) |
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2.3.4.0.16.2 |
PRDM2, isoform 2 (MTB-Zf) |
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2.3.4.0.16.3 |
PRDM2, isoform 3 (RIZ2) |
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2.3.4.0.16.4 |
PRDM2, isoform 4 |
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2.3.4.0.16.5 |
PRDM2, isoform 5 |
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2.3.4.0.17 |
ZNF800 (Zfp800) [1+3+2+1] |
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2.3.4.0.18 |
ZNF618 (Zfp618) [3+1] |
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F |
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| |
2.3.4.0.18.1 |
ZNF618, isoform 1 |
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2.3.4.0.18.2 |
ZNF618, isoform 2 |
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2.3.4.0.18.3 |
ZNF618, isoform 3 [3] |
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2.3.4.0.19 |
ZNF277 (NRIF4, ZNF277P, Zfp277) [1+1] |
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| |
2.3.4.0.20 |
TRPS1 (GC79) = 2.2.1.2.13 [1+1+3+2] |
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| |
2.3.4.0.20.1 |
TRPS1, isoform 1 |
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2.3.4.0.20.2 |
TRPS1, isoform 2 |
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2.3.4.0.20.3 |
TRPS1, isoform 3 |
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| |
2.3.4.0.21 |
ZNF451 (COASTER, Zfp451) [1+3+2+3+2] |
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| |
2.3.4.0.21.1 |
ZNF451, isoform 1 |
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2.3.4.0.21.2 |
ZNF451, isoform 2 |
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2.3.4.0.21.3 |
ZNF451, isoform 3 [0] |
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2.3.4.0.22 |
ZNF438 (Zfp438) [3+1] |
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2.3.4.0.22.1 |
ZNF438, isoform 1 |
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2.3.4.0.22.2 |
ZNF438, isoform 2 |
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2.3.4.0.22.3 |
ZNF438, isoform 3 |
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2.3.4.0.23 |
PEG3 (ZSCAN24) [4+1+5+2] |
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2.3.4.0.23.1 |
PEG3, isoform 1 |
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2.3.4.0.23.2 |
PEG3, isoform 2 |
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2.3.4.0.23.3 |
PEG3, isoform 3 [2] |
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2.3.4.0.23.4 |
PEG3, isoform 4 |
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2.3.4.0.24 |
ZNF507 (Zfp507) [2+1+3+2+1] |
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2.3.4.0.24.1 |
ZNF507, isoform 1 |
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2.3.4.0.24.2 |
ZNF507, isoform 2 [2+1+3] |
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2.3.4.0.25 |
ZNF236 (Zfp236) [9+4+4+4+4+5] |
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2.3.4.0.25.1 |
ZNF236, isoform 1 |
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2.3.4.0.25.2 |
ZNF236, isoform 2 [9+4+4+4+4] |
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2.3.4.0.26 |
ZNF770 (Zfp770) [3+3+1+2+2] |
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2.3.4.0.27 |
REST (NRSF, XBR) [1+7+1] |
TTCAGCACCACGGACAGCGCC |
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2.3.4.0.27.1 |
REST, isoform 1 |
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2.3.4.0.27.2 |
REST, isoform 2 [1+3] |
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2.3.4.0.27.3 |
REST, isoform 3 (N4) [1+4] |
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2.3.4.0.27.4 |
REST, isoform 4 [1+3+3+1] |
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2.3.4.0.28 |
ZFP57 (ZNF698) [4+3] |
TTCAGCACCACGGACAGCGCC |
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2.3.4.0.28.1 |
ZFP57, isoform 1 |
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2.3.4.0.28.2 |
ZFP57, isoform 2 |
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2.3.4.0.28.3 |
ZFP57, isoform 3 |
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2.3.4.0.29 |
ZNF8 (HF.18, Zfp128) [6+1] |
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2.3.4.0.30 |
ZNF597 (Zfp597) [4+3] |
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2.3.4.0.31 |
PRDM4 (PFM1) [1+5] |
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2.3.4.0.32 |
PRDM15 (ZNF298) [1+15] |
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2.3.4.0.32.1 |
PRDM15, isoform 1 |
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2.3.4.0.32.2 |
PRDM15, isoform 2 |
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2.3.4.0.32.3 |
PRDM15, isoform 3 |
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2.3.4.0.32.4 |
PRDM15, isoform 4 |
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2.3.4.0.32.5 |
PRDM15, isoform 5 |
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2.3.4.0.33 |
ZBTB41 (FRBZ1) [1+13] |
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2.3.4.0.33.1 |
ZBTB41, isoform 1 |
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2.3.4.0.33.2 |
ZBTB41, isoform 2 [1+9] |
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2.3.4.0.34 |
PRDM10 (PFM7, TRIS) [1+9] |
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2.3.4.0.34.1 |
PRDM10, isoform 1 |
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2.3.4.0.34.2 |
PRDM10, isoform 2 |
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2.3.4.0.34.3 |
PRDM10, isoform 3 |
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2.3.4.0.34.4 |
PRDM10, isoform 4 |
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2.3.4.0.34.5 |
PRDM10, isoform 5 |
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2.3.4.0.34.6 |
PRDM10, isoform 6 |
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2.3.4.0.34.7 |
PRDM10, isoform 7 |
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2.3.4.0.35 |
ZNF341 (Zfp341) [1+2+9] |
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F |
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2.3.4.0.35.1 |
ZNF341, isoform 1 |
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2.3.4.0.35.2 |
ZNF341, isoform 2 |
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2.3.4.0.36 |
ZNF513 (Zfp513) [3+5] |
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2.3.4.0.36.1 |
ZNF513, isoform 1 |
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2.3.4.0.36.2 |
ZNF513, isoform 2 |
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2.3.4.0.36.3 |
ZNF513, isoform 3 [5] |
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2.3.4.0.37 |
ZNF142 (ZFP142) [14+17] |
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2.3.4.0.38 |
FIZ1 (ZNF798) [4+2+5] |
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2.3.4.0.39 |
ZNF628 (Zfp628) [7+2+6] |
CAAGGTTGGTTGC |
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2.3.4.0.40 |
ZNF784 (Zfp784) [3+3] |
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2.3.4.0.41 |
ZNF697 (Zfp697) [1+10] |
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2.3.4.0.42 |
ZKSCAN5 (ZFP95) [4+9] |
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2.3.4.0.43 |
ZNF316 (Zfp316) [6+9] |
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2.3.4.0.44 |
ZNF775 (Zfp775) [4+4+3] |
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2.3.4.0.45 |
ZNF467 (Zfp467) [7+5] |
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2.3.4.0.46 |
ZNF787 (TTF-I-IP20, Zfp787) [5+2] |
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2.3.4.0.48 |
ZNF48 (ZNF553, Zfp48, Zfp553) [8+2+2] |
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2.3.4.0.49 |
ZNF629 (ZNF65, Zfp629) [15+3+1] |
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2.3.4.0.50 |
ZNF668 (Zfp668) [13+3] |
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2.3.4.0.50.1 |
ZNF668, isoform 1 |
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2.3.4.0.50.2 |
ZNF668, isoform 2 |
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2.3.4.0.51 |
ZNF101 (HZF12) [1+9] |
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2.3.4.0.51.1 |
ZNF101, isoform 1 |
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2.3.4.0.51.2 |
ZNF101, isoform 2 |
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2.3.4.0.52 |
ZNF251 [11+3] |
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2.3.4.0.53 |
ZNF445 (ZKSCAN15, ZNF168) [12+2] |
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2.3.4.0.54 |
ZNF806 [7+1] |
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2.3.4.0.56 |
ZSCAN20 (KOX29, ZNF31, ZNF360) [4+6] |
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2.3.4.0.56.1 |
ZSCAN20, isoform 1 |
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2.3.4.0.56.2 |
ZSCAN20, isoform 2 |
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2.3.4.0.56.3 |
ZSCAN20, isoform 3 |
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2.3.4.0.56.4 |
ZSCAN20, isoform 4 [0] |
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2.3.4.0.57 |
ZNF674 [4+7] |
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2.3.4.0.57.1 |
ZNF674, isoform 1 |
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2.3.4.0.57.2 |
ZNF674, isoform 2 |
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2.3.4.0.59 |
ZNF195 (ZNFP104) [2+8] |
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2.3.4.0.59.1 |
ZNF195, isoform 1 (A) |
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2.3.4.0.59.2 |
ZNF195, isoform 2 (B) |
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2.3.4.0.59.3 |
ZNF195, isoform 3 (C) |
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2.3.4.0.59.4 |
ZNF195, isoform 4 |
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2.3.4.0.59.5 |
ZNF195, isoform 5 |
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2.3.4.0.59.6 |
ZNF195, isoform 6 |
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2.3.4.0.59.7 |
ZNF195, isoform 7 |
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2.3.4.0.59.8 |
ZNF195, isoform 8 |
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2.3.4.0.60 |
ZNF788 (ZNF788P) [9+8] |
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2.3.4.0.60.1 |
ZNF788, long |
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2.3.4.0.60.2 |
ZNF788, isoform 1 |
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2.3.4.0.60.3 |
ZNF788, isoform 2 |
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2.3.4.0.62 |
ZNF491 [1+12] |
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2.3.4.0.63 |
ZNF778 [1+18] |
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2.3.4.0.63.1 |
ZNF778, isoform 1 |
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2.3.4.0.63.2 |
ZNF778, isoform 2 |
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2.3.4.0.64 |
ZNF426 (Zfp426) [1+11] |
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2.3.4.0.65 |
ZFP112 (ZNF112, ZNF228) [1+16] |
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2.3.4.0.65.1 |
ZFP112, isoform 1 |
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2.3.4.0.65.2 |
ZFP112, isoform 2 |
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2.3.4.0.67 |
ZNF606 (ZNF328) [2+14] |
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2.3.4.0.68 |
ZNF519 [1+9] |
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2.3.4.0.69 |
ZNF304 [2+14] |
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2.3.4.0.70 |
ZNF132 [2+16] |
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2.3.4.0.70.1 |
ZNF132, isoform 1 |
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2.3.4.0.70.2 |
ZNF132, isoform 2 |
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2.3.4.0.71 |
PRDM9 (PFM6) [1+13] |
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2.3.4.0.72 |
ZBTB17 (MIZ1, ZNF151, ZNF60) [12+1] |
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2.3.4.0.72.1 |
ZBTB17, isoform 1 |
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2.3.4.0.72.2 |
ZBTB17, isoform 2 |
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2.3.4.0.72.3 |
ZBTB17, isoform 3 |
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2.3.4.0.73 |
ZNF407 (Zfp407) [3+3+1+2+2+11] |
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2.3.4.0.73.1 |
ZNF407, isoform 1 |
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2.3.4.0.73.2 |
ZNF407, isoform 2 |
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2.3.4.0.73.3 |
ZNF407, isoform 3 |
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2.3.4.0.74 |
E4F1 (p120E4F, p50E4F) [3+6] |
TACGTCAC |
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2.3.4.0.75 |
ZNF462 (Zfp462) [1+2+2+1+3+1+1+3+2+1+4+5+1] |
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2.3.4.0.75.1 |
ZNF462, isoform 1 |
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2.3.4.0.75.2 |
ZNF462, isoform 2 [1+3+2+1+4+5+1] |
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2.3.4.0.75.3 |
ZNF462, isoform 3 |
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2.3.4.0.76 |
ZNF644 (ZEP2) [5+1+1] |
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2.3.4.0.76.1 |
ZNF644, isoform 1 |
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2.3.4.0.76.2 |
ZNF644, isoform 2 |
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2.3.4.0.76.3 |
ZNF644, isoform 3 |
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2.3.4.0.77 |
ADNP (ADNP1) = 3.1.8.1.1 [4+3+2] |
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2.3.4.0.78 |
ADNP2 (ZNF508) = 3.1.8.1.2 [1+1+1+1] |
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2.3.5 |
Family: BED zinc finger factors |
TGTCGCGACA |
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2.3.5.0.1 |
ZBED1 (ALTE, DREF, TRAMP) |
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2.3.5.0.2 |
ZBED2 |
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2.3.5.0.3 |
ZBED3 |
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2.3.5.0.4 |
ZBED4 |
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2.3.5.0.5 |
ZBED5 |
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2.3.5.0.6 |
ZBED6 |
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2.4 |
Class: C6 zinc cluster factors |
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2.5 |
Class: DM-type intertwined zinc finger factors |
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2.5.1 |
Family: DMRT |
TGATACATTGTTGC |
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2.5.1.0.1 |
DMRT1 |
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2.5.1.0.1.1 |
DMRT1, isoform 1 |
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2.5.1.0.1.2 |
DMRT1, isoform 2 |
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2.5.1.0.1.3 |
DMRT1, isoform 3 |
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2.5.1.0.2 |
DMRT2 |
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2.5.1.0.2.1 |
DMRT2, isoform 1 |
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2.5.1.0.2.2 |
DMRT2, isoform 2 |
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2.5.1.0.2.3 |
DMRT2, isoform 3 |
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2.5.1.0.3 |
DMRT3 |
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2.5.1.0.4 |
DMRTA1 (DMRT4) |
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2.5.1.0.5 |
DMRTA2 (DMRT5) |
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2.5.1.0.6 |
DMRTB1 |
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2.5.1.0.7 |
DMRTC2 |
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2.5.1.0.7.1 |
DMRTC2, isoform 1 |
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2.5.1.0.7.2 |
DMRTC2, isoform 2 |
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2.5.1.0.8 |
DMRTC1 (no DM domain!) |
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2.5.1.0.8.1 |
DMRTC1, isoform 1 |
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2.5.1.0.8.2 |
DMRTC1, isoform 2 |
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2.6 |
Class: CXXC zinc finger factors |
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2.6.1 |
Family: CpG-binding proteins |
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2.6.1.0.1 |
CpG-binding protein (CXXC1, CFP1, CGBP, PCCX1, PHF18) |
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2.6.1.0.1.1 |
CXXC1, isoform 1 |
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2.6.1.0.1.2 |
CXXC1, isoform 2 |
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2.6.1.0.2 |
MBD1 (CXXC3, PCM1) |
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2.6.1.0.2.1 |
MBD1, isoform 1 (MBD1v1) |
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2.6.1.0.2.2 |
MBD1, isoform 2 (MBD1v2) |
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2.6.1.0.2.4 |
MBD1, isoform 4 (MBD1v3) |
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2.6.1.0.2.5 |
MBD1, isoform 5 (PCM1) |
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2.6.1.0.2.6 |
MBD1, isoform 6 (MBD1v6) |
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2.6.1.0.2.7 |
MBD1, isoform 7 |
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2.6.1.0.2.8 |
MBD1, isoform 8 |
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2.6.1.0.2.9 |
MBD1, isoform 9 |
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2.6.1.0.2.10 |
MBD1, isoform 10 |
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| |
2.6.1.0.2.11 |
MBD1, isoform 11 |
|
|
|
|
|
| |
2.6.1.0.2.12 |
MBD1, isoform 12 |
|
|
|
|
|
| |
2.6.1.0.3 |
TET1 (CXXC6, LCX) |
|
|
|
|
|
|
|
| |
2.6.1.0.4 |
MLL (CXXC7, ALL1, HRX, HTRX, KMT2A, MLL1, TRX1) |
|
|
|
|
|
|
|
| |
2.6.1.0.4.1 |
MLL, isoform 1 |
|
|
|
|
|
| |
2.6.1.0.4.2 |
MLL, isoform 2 (14P-18B) |
|
|
|
|
|
| |
2.6.1.0.4.3 |
MLL, isoform 3 |
|
|
|
|
|
| |
2.6.1.0.5 |
KDM2A (CXXC8, FBL7, FBXL11, JHDM1A) |
|
|
|
|
|
|
|
| |
2.6.1.0.5.1 |
KDM2A, isoform 1 |
|
|
|
|
|
| |
2.6.1.0.5.2 |
KDM2A, isoform 2 |
|
|
|
|
|
| |
2.6.1.0.5.3 |
KDM2A, isoform 3 |
|
|
|
|
|
| |
2.6.1.0.5.4 |
KDM2A, isoform 4 |
|
|
|
|
|
| |
2.6.1.0.5.5 |
KDM2A, isoform 5 |
|
|
|
|
|
| |
2.6.1.0.6 |
DNMT1 (CXXC9, AIM, DNMT) |
|
|
|
|
|
|
|
| |
2.6.1.0.6.1 |
DNMT1, isoform 1 |
|
|
|
|
|
| |
2.6.1.0.6.2 |
DNMT1, isoform 2 (Dnmt1b) |
|
|
|
|
|
| |
2.6.1.0.6.3 |
DNMT1, isoform 3 |
|
|
|
|
|
| |
2.6.1.0.7 |
MLL2 (HRX2, KMT2B, WBP7, MLL4, TRX2) |
|
|
|
|
|
|
|
| |
2.6.1.0.7.1 |
MLL2, isoform 1 (long) |
|
|
|
|
|
| |
2.6.1.0.7.2 |
MLL2, isoform 2 (truncated) |
|
|
|
|
|
| |
2.7 |
Class: C2HC zinc finger factors |
|
|
|
| |
2.7.1 |
Family: Myelin transcription factor-related proteins |
AAGTT |
|
| |
2.7.1.0.1 |
MYT1 (MyT1, MTF1, MYTI, PLPB1) [7] |
|
|
|
|
|
|
|
| |
2.7.1.0.1.1 |
MYT1, isoform 1 |
|
|
|
|
|
| |
2.7.1.0.1.2 |
MYT1, isoform 2 |
|
|
|
|
|
| |
2.7.1.0.2 |
MYT1L (MyT1L, NZF-1) [6] |
|
|
|
|
|
|
|
| |
2.7.1.0.2.1 |
MYT1L, isoform 1 |
|
|
|
|
|
| |
2.7.1.0.2.2 |
MYT1L, isoform 2 |
|
|
|
|
|
| |
2.7.1.0.2.3 |
MYT1L, isoform 3 |
|
|
|
|
|
| |
2.7.1.0.2.4 |
MYT1L, isoform 4 |
|
|
|
|
|
| |
2.7.1.0.3 |
ST18 (ZNF387, NZF-3) [6] |
|
|
|
|
|
|
|
| |
2.7.2 |
Family: Friend of GATA proteins |
|
|
| |
2.7.2.0.1 |
FOG1 (ZFPM1, ZFN89A) [5] = 2.3.4.0.6 |
|
|
|
|
|
|
|
| |
2.7.2.0.2 |
FOG2 (ZFPM2, ZFN89B) [5] = 2.3.2.4.6 |
|
|
|
|
|
F |
|
| |
2.7.2.0.2.1 |
ZFPM2, isoform 1 |
|
|
|
|
|
| |
2.7.2.0.2.2 |
ZFPM2, isoform 2 |
|
|
|
|
|
| |
2.7.3 |
Family: Histone acetyltransferases with C2HC zinc finger |
|
|
| |
2.7.3.0.1 |
MYST1 (KAT8, TIP60 protein 1) [1] |
|
|
|
|
|
|
|
| |
2.7.3.0.1.1 |
MYST1, isoform 1 |
|
|
|
|
|
| |
2.7.3.0.1.2 |
MYST1, isoform 2 |
|
|
|
|
|
| |
2.7.3.0.2 |
MYST2 (KAT7, TIP60 protein 2, HBO1, HBOa) [1] |
|
|
|
|
|
|
|
| |
2.7.3.0.2.1 |
MYST2, isoform 1 |
|
|
|
|
|
| |
2.7.3.0.2.2 |
MYST2, isoform 2 |
|
|
|
|
|
| |
2.7.3.0.2.3 |
MYST2, isoform 3 |
|
|
|
|
|
| |
2.7.3.0.2.4 |
MYST2, isoform 4 |
|
|
|
|
|
| |
2.7.3.0.2.5 |
MYST2, isoform 5 |
|
|
|
|
|
| |
2.7.3.0.3 |
MYST3 (KAT6A, TIP60 protein 3, RUNXBP2, ZNF220) [1] |
|
|
|
|
|
|
|
| |
2.7.3.0.4 |
MYST4 (KAT6B, TIP60 protein 4, MORF, MOZ2) [1] |
|
|
|
|
|
|
|
| |
2.7.3.0.4.1 |
MYST4, isoform 1 (β) |
|
|
|
|
|
| |
2.7.3.0.4.2 |
MYST4, isoform 2 (α) |
|
|
|
|
|
| |
2.7.3.0.4.3 |
MYST4, isoform 3 |
|
|
|
|
|
| |
2.7.3.0.5 |
KAT5 (HTATIP, TIP60) [1] |
|
|
|
|
|
|
|
| |
2.7.3.0.5.1 |
KAT5, isoform 1 (Tip60-α) |
|
|
|
|
|
| |
2.7.3.0.5.2 |
KAT5, isoform 2 (PLIP, Tip60-β) |
|
|
|
|
|
| |
2.7.3.0.5.3 |
KAT5, isoform 3 |
|
|
|
|
|
| |
2.7.3.0.5.4 |
KAT5, isoform 4 |
|
|
|
|
|
| |
2.7.4 |
Family: Lethal(3)malignant brain tumor-related proteins |
|
|
| |
2.7.4.0.1 |
L3MBTL1 (L3MBT, L3MBTL) [1] |
|
|
|
|
|
|
|
| |
2.7.4.0.1.1 |
L3MBTL1, isoform 1 (mbt-I) |
|
|
|
|
|
| |
2.7.4.0.1.2 |
L3MBTL1, isoform 2 (mbt-II) |
|
|
|
|
|
| |
2.7.4.0.1.3 |
L3MBTL1, isoform 3 |
|
|
|
|
|
| |
2.7.4.0.1.4 |
L3MBTL1, isoform 4 |
|
|
|
|
|
| |
2.7.4.0.1.5 |
L3MBTL1, isoform 5 |
|
|
|
|
|
| |
2.7.5 |
Family: LYAR-related proteins |
|
|
| |
2.7.5.0.1 |
LYAR (PNAS-5) [2] |
|
|
|
|
|
|
|
| |
2.8 |
Class: C3H zinc finger factors |
|
|
|
| |
2.8.1 |
Family: ZC3H8-related factors |
|
|
| |
2.8.1.0.1 |
ZC3H8 (ZC3HDC8, FLIZ1) [3] |
|
|
|
|
|
|
|
| |
2.8.1.0.2 |
ZC3H4 [3] |
|
|
|
|
|
|
|
| |
2.8.1.0.3 |
ZC3H6 (ZC3HDC6) [3] |
|
|
|
|
|
|
|
| |
2.8.2 |
Family: ZGPAT-related factors |
|
|
| |
2.8.2.0.1 |
ZGPAT (GPATC6, GPATCH6, ZC3H9, ZC3HDC9, ZIP) [1] |
|
|
|
|
|
|
|
| |
2.8.2.0.1.1 |
ZGPAT, isoform 1 |
|
|
|
|
|
| |
2.8.2.0.1.2 |
ZGPAT, isoform 2 |
|
|
|
|
|
| |
2.8.2.0.1.3 |
ZGPAT, isoform 3 |
|
|
|
|
|
| |
2.8.2.0.1.4 |
ZGPAT, isoform 4 |
|
|
|
|
|
| |
2.8.3 |
Family: RC3H-related factors |
|
|
| |
2.8.3.0.1 |
RC3H2 (Roquin-2, MNAB, RNF164) [1] |
|
|
|
|
|
|
|
| |
2.8.3.0.1.1 |
RC3H2, isoform 1 |
|
|
|
|
|
| |
2.8.3.0.1.2 |
RC3H2, isoform 2 |
|
|
|
|
|
| |
2.8.3.0.1.3 |
RC3H2, isoform 3 |
|
|
|
|
|
| |
2.8.3.0.1.4 |
RC3H2, isoform 4 |
|
|
|
|
|
| |
2.8.3.0.1.5 |
RC3H2, isoform 5 |
|
|
|
|
|
| |
2.8.3.0.1.6 |
RC3H2, isoform 6 |
|
|
|
|
|
| |
2.8.4 |
Family: CNOT4-related factors |
|
|
| |
2.8.4.0.1 |
CNOT4 (NOT4) [1] |
|
|
|
|
|
|
|
| |
2.8.4.0.1.1 |
CNOT4, isoform 1 |
|
|
|
|
|
| |
2.8.4.0.1.2 |
CNOT4, isoform 2 |
|
|
|
|
|
| |
2.8.4.0.1.3 |
CNOT4, isoform 3 |
|
|
|
|
|
| |
2.8.4.0.1.4 |
CNOT4, isoform 4 |
|
|
|
|
|
| |
2.8.4.0.1.5 |
CNOT4, isoform 5 |
|
|
|
|
|
| |
2.8.4.0.1.6 |
CNOT4, isoform 6 |
|
|
|
|
|
| |
2.8.4.0.1.7 |
CNOT4, isoform 7 |
|
|
|
|
|
| |
2.8.4.0.1.8 |
CNOT4, isoform 8 |
|
|
|
|
|
| |
2.8.4.0.1.9 |
CNOT4, isoform 9 |
|
|
|
|
|
| |
2.8.4.0.1.10 |
CNOT4, isoform 10 |
|
|
|
|
|
| |
2.9 |
Class: C2CH THAP-type zinc finger factors |
|
|
|
| |
2.9.1 |
Family: THAP-related factors |
TTGCCCGTACT |
|
| |
2.9.1.0.1 |
THAP1 |
|
|
|
|
|
|
|
| |
2.9.1.0.1.1 |
THAP1, isoform 1 |
|
|
|
|
|
| |
2.9.1.0.1.2 |
THAP1, isoform 2 |
|
|
|
|
|
| |
2.9.1.0.2 |
THAP2 |
|
|
|
|
|
|
|
| |
2.9.1.0.3 |
THAP3 |
|
|
|
|
|
|
|
| |
2.9.1.0.3.1 |
THAP3, isoform 1 |
|
|
|
|
|
| |
2.9.1.0.3.2 |
THAP3, isoform 2 |
|
|
|
|
|
| |
2.9.1.0.3.3 |
THAP3, isoform 3 |
|
|
|
|
|
| |
2.9.1.0.4 |
THAP4 (CGI-36, PP238) |
|
|
|
|
|
|
|
| |
2.9.1.0.4.1 |
THAP4, isoform 1 |
|
|
|
|
|
| |
2.9.1.0.4.2 |
THAP4, isoform 2 |
|
|
|
|
|
| |
2.9.1.0.5 |
THAP5 |
|
|
|
|
|
|
|
| |
2.9.1.0.5.1 |
THAP5, isoform 1 |
|
|
|
|
|
| |
2.9.1.0.5.2 |
THAP5, isoform 2 |
|
|
|
|
|
| |
2.9.1.0.6 |
THAP6 |
|
|
|
|
|
|
|
| |
2.9.1.0.6.1 |
THAP6, isoform 1 |
|
|
|
|
|
| |
2.9.1.0.6.2 |
THAP6, isoform 2 |
|
|
|
|
|
| |
2.9.1.0.6.3 |
THAP6, isoform 3 |
|
|
|
|
|
| |
2.9.1.0.7 |
THAP7 |
|
|
|
|
|
|
|
| |
2.9.1.0.8 |
THAP8 |
|
|
|
|
|
|
|
| |
2.9.1.0.9 |
THAP9 |
|
|
|
|
|
|
|
| |
2.9.1.0.10 |
THAP10 |
|
|
|
|
|
|
|
| |
2.9.1.0.11 |
THAP11 (HRIHFB2206) |
|
|
|
|
|
|
|
| |
2.9.1.0.12 |
PRKRIR (P52RIPK, DAP4, THAP0) |
|
|
|
|
|
|
|
| |
2.9.1.0.12.1 |
PRKRIR, isoform 1 (Long) |
|
|
|
|
|
| |
2.9.1.0.12.2 |
PRKRIR, isoform 2 (Short) |
|
|
|
|
|
|
| 3 |
Superclass: Helix-turn-helix domains |
|
|
| |
3.1 |
Class: Homeo domain factors |
|
|
|
| |
3.1.1 |
Family: HOX-related factors |
|
|
| |
3.1.1.1 |
Subfamily: HOX1 |
TAATTA |
|
| |
3.1.1.1.1 |
Hox-A1 (HOX1F) |
 |
|
|
|
|
|
|
| |
3.1.1.1.1.1 |
Hox-A1, isoform 1 (36 kDa) |
|
|
|
|
|
| |
3.1.1.1.1.2 |
Hox-A1, isoform 2 (14 kDa) |
|
|
|
|
|
| |
3.1.1.1.1.3 |
Hox-A1, isoform 3 (24 kDa) |
|
|
|
|
|
| |
3.1.1.1.2 |
Hox-B1 (HOX2I) |
|
|
|
|
|
|
|
| |
3.1.1.1.2.1 |
Hox-B1, isoform 1 |
|
|
|
|
|
| |
3.1.1.1.2.2 |
Hox-B1, isoform 2 |
|
|
|
|
|
| |
3.1.1.1.3 |
Hox-D1 (HOX4G) |
|
|
|
|
|
|
|
| |
3.1.1.2 |
Subfamily: HOX2 |
TAATTA |
|
| |
3.1.1.2.1 |
Hox-A2 (HOX1K) |
 |
|
|
|
|
|
|
| |
3.1.1.2.2 |
Hox-B2 (HOX2H) |
 |
|
|
|
|
|
|
| |
3.1.1.3 |
Subfamily: HOX3 |
TAATTA |
|
| |
3.1.1.3.1 |
Hox-A3 (HOX1E) |
|
|
|
|
|
|
|
| |
3.1.1.3.2 |
Hox-B3 (HOX2G) |
 |
|
|
|
|
|
|
| |
3.1.1.3.2.1 |
Hox-B3, isoform 1 |
|
|
|
|
|
| |
3.1.1.3.2.2 |
Hox-B3, isoform 2 |
|
|
|
|
|
| |
3.1.1.3.2.3 |
Hox-B3, isoform 3 |
|
|
|
|
|
| |
3.1.1.3.3 |
Hox-D3 (HOX4A) |
 |
|
|
|
|
|
|
| |
3.1.1.4 |
Subfamily: HOX4 |
TTAATTAA |
|
| |
3.1.1.4.1 |
Hox-A4 (HOX1D) |
|
|
|
|
|
F |
|
| |
3.1.1.4.2 |
Hox-B4 (HOX2F) |
|
|
|
|
|
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|
| |
3.1.1.4.3 |
Hox-C4 (HOX3E) |
|
|
|
|
|
|
|
| |
3.1.1.4.4 |
Hox-D4 (HOX4B) |
|
|
|
|
|
|
|
| |
3.1.1.5 |
Subfamily: HOX5 |
TAATTA |
|
| |
3.1.1.5.1 |
Hox-A5 (HOX1C) |
|
|
|
|
|
|
|
| |
3.1.1.5.2 |
Hox-B5 (HOX2A) |
 |
|
|
|
|
|
|
| |
3.1.1.5.3 |
Hox-C5 (HOX3D) |
|
|
|
|
|
|
|
| |
3.1.1.6 |
Subfamily: HOX6-7 |
TAATTA |
|
| |
3.1.1.6.1 |
Hox-A6 (HOX1B) |
|
|
|
|
|
|
|
| |
3.1.1.6.2 |
Hox-B6 (HOX2B) |
|
|
|
|
|
|
|
| |
3.1.1.6.2.1 |
Hox-B6, isoform 1 |
|
|
|
|
|
| |
3.1.1.6.2.2 |
Hox-B6, isoform 2 |
|
|
|
|
|
| |
3.1.1.6.3 |
Hox-C6 (HOX3C) |
|
|
|
|
|
|
|
| |
3.1.1.6.3.1 |
Hox-C6, isoform 1 |
|
|
|
|
|
| |
3.1.1.6.3.2 |
Hox-C6, isoform 2 |
|
|
|
|
|
| |
3.1.1.6.4 |
Hox-A7 (HOX1A) |
|
|
|
|
|
|
|
| |
3.1.1.6.5 |
Hox-B7 (HOX2C) |
|
|
|
|
|
|
|
| |
3.1.1.7 |
Subfamily: HOX8 |
GTAATTA |
|
| |
3.1.1.7.1 |
Hox-B8 (HOX2D) |
|
|
|
|
|
|
|
| |
3.1.1.7.2 |
Hox-C8 (HOX3A) |
|
|
|
|
|
|
|
| |
3.1.1.7.3 |
Hox-D8 (HOX4E) |
 |
|
|
|
|
F |
|
| |
3.1.1.7.3.1 |
Hox-D8, isoform 1 |
|
|
|
|
|
| |
3.1.1.7.3.2 |
Hox-D8, isoform 2 |
|
|
|
|
|
| |
3.1.1.7.3.3 |
Hox-D8, isoform 3 |
|
|
|
|
|
| |
3.1.1.8 |
Subfamily: HOX9-13 |
TCGTAAA |
|
| |
3.1.1.8.1 |
Hox-A9 (HOX1G) |
|
|
|
|
|
|
|
| |
3.1.1.8.2 |
Hox-B9 (HOX2E) |
|
|
|
|
|
|
|
| |
3.1.1.8.3 |
Hox-C9 (HOX3B) |
|
|
|
|
|
|
|
| |
3.1.1.8.4 |
Hox-D9 (HOX4C) |
 |
|
|
|
|
|
|
| |
3.1.1.8.5 |
Hox-A10 (HOX1H) |
 |
|
|
|
|
|
|
| |
3.1.1.8.5.1 |
Hox-A10, isoform 1 (PL1) |
|
|
|
|
|
| |
3.1.1.8.5.2 |
Hox-A10, isoform 2 (PL2) |
|
|
|
|
|
| |
3.1.1.8.6 |
Hox-C10 (HOX3I) |
 |
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|
| |
3.1.1.8.7 |
Hox-D10 (HOX4D, HOX4E) |
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|
| |
3.1.1.8.8 |
Hox-A11 (HOX1I) |
 |
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|
| |
3.1.1.8.9 |
Hox-C11 (HOX3H) |
 |
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|
| |
3.1.1.8.10 |
Hox-D11 (HOX4F) |
 |
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|
| |
3.1.1.8.11 |
Hox-C12 (HOX3F) |
 |
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|
| |
3.1.1.8.12 |
Hox-D12 (HOX4H) |
 |
|
|
|
|
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|
| |
3.1.1.8.12.1 |
Hox-D12, isoform 1 |
|
|
|
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|
| |
3.1.1.8.12.2 |
Hox-D12, isoform 2 |
|
|
|
|
|
| |
3.1.1.8.13 |
Hox-A13 (HOX1J) |
 |
|
|
|
|
F |
|
| |
3.1.1.8.14 |
Hox-B13 |
 |
|
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|
| |
3.1.1.8.15 |
Hox-C13 (HOX3G) |
 |
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|
| |
3.1.1.8.16 |
Hox-D13 (HOX4I) |
 |
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|
| |
3.1.1.9 |
Subfamily: CDX (Caudal type homeobox) |
GGTAATAAA |
|
| |
3.1.1.9.1 |
CDX-1 |
 |
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|
|
|
F |
|
| |
3.1.1.9.1.1 |
CDX-1, isoform 1 |
|
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|
| |
3.1.1.9.1.2 |
CDX-1, isoform 2 |
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| |
3.1.1.9.2 |
CDX-2 (CDX-3) |
 |
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| |
3.1.1.9.3 |
CDX-4 |
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| |
3.1.1.10 |
Subfamily: EVX (Even-skipped homolog) |
CTAATTAG |
|
| |
3.1.1.10.1 |
EVX-1 |
 |
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| |
3.1.1.10.1.1 |
EVX-1, isoform 1 |
|
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| |
3.1.1.10.1.2 |
EVX-1, isoform 2 |
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| |
3.1.1.10.2 |
EVX-2 |
 |
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|
| |
3.1.1.11 |
Subfamily: GBX (Gastrulation brain homeobox) |
CTAATTAG |
|
| |
3.1.1.11.1 |
GBX-1 |
 |
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| |
3.1.1.11.2 |
GBX-2 |
 |
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| |
3.1.1.12 |
Subfamily: GSX |
TAATTA |
|
| |
3.1.1.12.1 |
GSX-1 (GSH-1) |
 |
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| |
3.1.1.12.2 |
GSX-2 (GSH-2) |
 |
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| |
3.1.1.13 |
Subfamily: MNX |
ACTAATTA |
|
| |
3.1.1.13.1 |
MNX1 (HB9, HLXB9) |
 |
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| |
3.1.1.13.1.1 |
MNX1, isoform 1 |
|
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| |
3.1.1.13.1.2 |
MNX1, isoform 2 |
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| |
3.1.1.14 |
Subfamily: MEOX |
TAATTA |
|
| |
3.1.1.14.1 |
MEOX-1 (MOX-1) |
 |
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| |
3.1.1.14.1.1 |
MEOX-1, isoform 1 |
|
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| |
3.1.1.14.1.2 |
MEOX-1, isoform 2 |
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| |
3.1.1.14.1.3 |
MEOX-1, isoform 3 |
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| |
3.1.1.14.2 |
MEOX-2 (MOX-2) |
 |
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| |
3.1.1.15 |
Subfamily: PDX |
TAATTA |
|
| |
3.1.1.15.1 |
PDX-1 (IPF-1) |
 |
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| |
3.1.2 |
Family: NK-related factors |
|
|
| |
3.1.2.1 |
Subfamily: BARHL |
AACCAATTA |
|
| |
3.1.2.1.1 |
BarH-L1 |
 |
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| |
3.1.2.1.2 |
BarH-L2 |
 |
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|
| |
3.1.2.2 |
Subfamily: BARX |
TAATTA |
|
| |
3.1.2.2.1 |
BARX-1 |
 |
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|
| |
3.1.2.2.1.1 |
BARX-1, isoform 1 |
|
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|
| |
3.1.2.2.1.2 |
BARX-1, isoform 2 |
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| |
3.1.2.2.2 |
BARX-2 |
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|
| |
3.1.2.3 |
Subfamily: BSX |
TAATTA |
|
| |
3.1.2.3.1 |
BSX-1 (BSX) |
 |
|
|
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|
| |
3.1.2.4 |
Subfamily: DBX |
TTAATTA |
|
| |
3.1.2.4.1 |
DBX-1 |
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| |
3.1.2.4.2 |
DBX-2 |
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|
| |
3.1.2.5 |
Subfamily: DLX |
TAATTA |
|
| |
3.1.2.5.1 |
DLX-1 |
 |
|
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|
| |
3.1.2.5.1.1 |
DLX-1, isoform 1 |
|
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|
| |
3.1.2.5.1.2 |
DLX-1, isoform 2 |
|
|
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|
| |
3.1.2.5.2 |
DLX-2 |
 |
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|
| |
3.1.2.5.2.1 |
DLX-2, isoform 1 |
|
|
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|
| |
3.1.2.5.2.2 |
DLX-2, isoform 2 |
|
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|
| |
3.1.2.5.3 |
DLX-3 |
 |
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|
| |
3.1.2.5.4 |
DLX-4 |
 |
|
|
|
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|
| |
3.1.2.5.4.1 |
DLX-4, isoform 1 |
|
|
|
|
|
| |
3.1.2.5.4.2 |
DLX-4, isoform 2 |
|
|
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|
| |
3.1.2.5.4.3 |
DLX-4, isoform 3 |
|
|
|
|
|
| |
3.1.2.5.5 |
DLX-5 |
 |
|
|
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|
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|
| |
3.1.2.5.5.1 |
DLX-5, isoform 1 |
|
|
|
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|
| |
3.1.2.5.5.2 |
DLX-5, isoform 2 |
|
|
|
|
|
| |
3.1.2.5.6 |
DLX-6 |
 |
|
|
|
|
F |
|
| |
3.1.2.5.6.1 |
DLX-6, isoform 1 |
|
|
|
|
|
| |
3.1.2.5.6.2 |
DLX-6, isoform 2 |
|
|
|
|
|
| |
3.1.2.5.6.3 |
DLX-6, isoform 3 |
|
|
|
|
|
| |
3.1.2.6 |
Subfamily: EMX |
CTAATTAG |
|
| |
3.1.2.6.1 |
EMX-1 |
 |
|
|
|
|
|
|
| |
3.1.2.6.1.1 |
EMX-1, isoform 1 |
|
|
|
|
|
| |
3.1.2.6.1.2 |
EMX-1, isoform 2 |
|
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|
| |
3.1.2.6.2 |
EMX-2 |
 |
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|
|
|
|
| |
3.1.2.6.2.1 |
EMX-2, isoform 1 |
|
|
|
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|
| |
3.1.2.6.2.2 |
EMX-2, isoform 2 |
|
|
|
|
|
| |
3.1.2.7 |
Subfamily: EN (Engrailed-like factors) |
CTAATTAG |
|
| |
3.1.2.7.1 |
EN-1 |
 |
|
|
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|
F |
|
| |
3.1.2.7.2 |
EN-2 |
 |
|
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|
| |
3.1.2.8 |
Subfamily: HHEX |
ATTAA |
|
| |
3.1.2.8.1 |
HHEX (PRH) |
|
|
|
|
|
|
|
| |
3.1.2.9 |
Subfamily: HLX |
TAATTAATTA |
|
| |
3.1.2.9.1 |
HLX-1 (HB24) |
|
|
|
|
|
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|
| |
3.1.2.10 |
Subfamily: LBX |
TTAATTAA |
|
| |
3.1.2.10.1 |
LBX-1 |
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|
| |
3.1.2.10.2 |
LBX-2 |
 |
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|
| |
3.1.2.10.2.1 |
LBX-2, isoform 1 |
|
|
|
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|
| |
3.1.2.10.2.2 |
LBX-2, isoform 2 |
|
|
|
|
|
| |
3.1.2.11 |
Subfamily: MSX |
ACCAATTA |
|
| |
3.1.2.11.1 |
MSX-1 (HOX7) |
 |
|
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|
| |
3.1.2.11.2 |
MSX-2 (HOX8) |
 |
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|
| |
3.1.2.12 |
Subfamily: NANOG |
CCATTT |
|
| |
3.1.2.12.1 |
NANOG |
|
|
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|
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|
| |
3.1.2.12.1.1 |
NANOG, isoform 1 |
|
|
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|
| |
3.1.2.12.1.2 |
NANOG, isoform 2 (NANOG-Δ48) |
|
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|
| |
3.1.2.12.2 |
NANOG2 (NANOGP1) |
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|
| |
3.1.2.12.3 |
NANOGP8 |
|
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|
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|
| |
3.1.2.13 |
Subfamily: NK-1 |
CTAATTAG |
|
| |
3.1.2.13.1 |
NKX-1.1 (NKX1-1, SAX-2) |
|
|
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|
| |
3.1.2.13.2 |
NKX-1.2 (NKX1-2, SAX-1) |
|
|
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|
|
|
|
| |
3.1.2.14 |
Subfamily: NK-2.1 |
CCACTTGA |
|
| |
3.1.2.14.1 |
NKX-2.1 (NKX2-1, TTF-1) |
|
|
|
|
|
|
|
| |
3.1.2.14.1.1 |
NKX-2.1, isoform 1 |
|
|
|
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|
| |
3.1.2.14.1.2 |
NKX-2.1, isoform 3 |
|
|
|
|
|
| |
3.1.2.14.2 |
NKX-2.4 (NKX2-4, NK-2HD) |
|
|
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|
|
|
|
| |
3.1.2.15 |
Subfamily: NK-2.2 |
CCACTTGA |
|
| |
3.1.2.15.1 |
NKX-2.2 (NKX2-2, NKX2B) |
|
|
|
|
|
|
|
| |
3.1.2.15.2 |
NKX-2.8 (NKX2-8, NKX2G, NKX2H) |
 |
|
|
|
|
|
|
| |
3.1.2.16 |
Subfamily: NK-3 |
AAGTACTT |
|
| |
3.1.2.16.1 |
NKX-3.1 (NKX3-1, NKX3A) |
 |
|
|
|
|
|
|
| |
3.1.2.16.1.1 |
NKX-3.1, isoform 1 |
|
|
|
|
|
| |
3.1.2.16.1.2 |
NKX-3.1, isoform 2 (V2) |
|
|
|
|
|
| |
3.1.2.16.1.3 |
NKX-3.1, isoform 3 (V4) |
|
|
|
|
|
| |
3.1.2.16.1.4 |
NKX-3.1, isoform 4 (V3) |
|
|
|
|
|
| |
3.1.2.16.1.5 |
NKX-3.1, isoform 5 (V1) |
|
|
|
|
|
| |
3.1.2.16.2 |
NKX-3.2 (NKX3-2, NKX3B) |
 |
|
|
|
|
F |
|
| |
3.1.2.17 |
Subfamily: NK-4 |
CCACTTAA |
|
| |
3.1.2.17.1 |
NKX-2.3 (NKX2-3, NKX2C, NKX4-3) |
 |
|
|
|
|
|
|
| |
3.1.2.17.2 |
NKX-2.5 (NKX2-5, NKX2E, NKX4-1, CSX) |
|
|
|
|
|
|
|
| |
3.1.2.17.2.1 |
NKX-2.5, isoform 1 |
|
|
|
|
|
| |
3.1.2.17.2.2 |
NKX-2.5, isoform 2 |
|
|
|
|
|
| |
3.1.2.17.2.3 |
NKX-2.5, isoform 3 |
|
|
|
|
|
| |
3.1.2.17.3 |
NKX-2.6 (NKX2-6, NKX2F, NKX4-2, CSX2) |
|
|
|
|
|
|
|
| |
3.1.2.18 |
Subfamily: NK-5/HMX |
AGCAATTAA |
|
| |
3.1.2.18.1 |
HMX-1 (H6, NKX5-3, NKX-5.3) |
 |
|
|
|
|
|
|
| |
3.1.2.18.2 |
HMX-2 (H6L, NKX5-2, NKX-5.2) |
 |
|
|
|
|
|
|
| |
3.1.2.18.3 |
HMX-3 (NKX5-1, NKX-5.1) |
 |
|
|
|
|
|
|
| |
3.1.2.19 |
Subfamily: NK-6 |
AATAATTA |
|
| |
3.1.2.19.1 |
NKX-6.1 (NKX6-1, NKX6A) |
 |
|
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|
|
|
|
| |
3.1.2.19.2 |
NKX-6.2 (NKX6-2, NKX6B) |
 |
|
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|
|
|
| |
3.1.2.19.3 |
NKX-6.3 (NKX6-3) |
|
|
|
|
|
|
|
| |
3.1.2.19.3.1 |
NKX-6.3, isoform 1 |
|
|
|
|
|
| |
3.1.2.19.3.2 |
NKX-6.3, isoform 2 |
|
|
|
|
|
| |
3.1.2.20 |
Subfamily: NOTO |
|
|
| |
3.1.2.20.1 |
NOTO |
 |
|
|
|
|
|
|
| |
3.1.2.21 |
Subfamily: TLX |
AATTAATA |
|
| |
3.1.2.21.1 |
TLX-1 (HOX11, TCL-3) |
|
|
|
|
|
|
|
| |
3.1.2.21.1.1 |
TLX-1, isoform 1 |
|
|
|
|
|
| |
3.1.2.21.1.2 |
TLX-1, isoform 2 |
|
|
|
|
|
| |
3.1.2.21.2 |
TLX-2 (HOX11L1, NCX) |
|
|
|
|
|
|
|
| |
3.1.2.21.3 |
TLX-3 (HOX11L2) |
|
|
|
|
|
|
|
| |
3.1.2.22 |
Subfamily: VAX |
TAATTA |
|
| |
3.1.2.22.1 |
VAX-1 |
 |
|
|
|
|
|
|
| |
3.1.2.22.1.1 |
VAX-1, isoform 1 |
|
|
|
|
|
| |
3.1.2.22.1.2 |
VAX-1, isoform 2 |
|
|
|
|
|
| |
3.1.2.22.2 |
VAX-2 |
 |
|
|
|
|
|
|
| |
3.1.2.23 |
Subfamily: VENTX |
|
|
| |
3.1.2.23.1 |
VENTX (VENTX2, HPX42B) |
 |
|
|
|
|
|
|
| |
3.1.3 |
Family: Paired-related HD factors |
|
|
| |
3.1.3.1 |
Subfamily: ALX |
TTAATTAA |
|
| |
3.1.3.1.1 |
ALX-1 (CART-1) |
 |
|
|
|
|
|
|
| |
3.1.3.1.2 |
ALX-3 |
 |
|
|
|
|
|
|
| |
3.1.3.1.3 |
ALX-4 |
 |
|
|
|
|
|
|
| |
3.1.3.2 |
Subfamily: ARGFX |
|
|
| |
3.1.3.2.1 |
ARGFX |
|
|
|
|
|
|
|
| |
3.1.3.3 |
Subfamily: ARX |
TTAATTAA |
|
| |
3.1.3.3.1 |
ARX |
|
|
|
|
|
|
|
| |
3.1.3.4 |
Subfamily: DMBX |
GGATTA |
|
| |
3.1.3.4.1 |
DMBX (MBX, OTX-3, PAXB) |
 |
|
|
|
|
|
|
| |
3.1.3.4.1.1 |
DMBX, isoform 1 (MBX-L) |
|
|
|
|
|
| |
3.1.3.4.1.2 |
DMBX, isoform 2 (MBX-S) |
|
|
|
|
|
| |
3.1.3.5 |
Subfamily: DPRX |
|
|
| |
3.1.3.5.1 |
DPRX |
 |
|
|
|
|
|
|
| |
3.1.3.6 |
Subfamily: DRGX |
|
|
| |
3.1.3.6.1 |
DRGX (PRRXL1, Drg11) |
 |
|
|
|
|
|
|
| |
3.1.3.7 |
Subfamily: DUX |
TCTAATTGAGAATTAC |
|
| |
3.1.3.7.1 |
DUXA |
 |
|
|
|
|
|
|
| |
3.1.3.7.2 |
DUX1 |
|
|
|
|
|
|
|
| |
3.1.3.7.4 |
DUX3 |
|
|
|
|
|
|
|
| |
3.1.3.7.4.1 |
DUX3, isoform 1 |
|
|
|
|
|
| |
3.1.3.7.4.2 |
DUX3, isoform 2 |
|
|
|
|
|
| |
3.1.3.7.5 |
DUX4 |
|
|
|
|
|
|
|
| |
3.1.3.7.6 |
DUX5 |
|
|
|
|
|
|
|
| |
3.1.3.7.6.1 |
DUX5, isoform 1 |
|
|
|
|
|
| |
3.1.3.7.6.2 |
DUX5, isoform 2 |
|
|
|
|
|
| |
3.1.3.7.7 |
DUX4L2 |
|
|
|
|
|
|
|
| |
3.1.3.7.8 |
DUX4L3 |
|
|
|
|
|
|
|
| |
3.1.3.7.9 |
DUX4L4 |
|
|
|
|
|
|
|
| |
3.1.3.7.10 |
DUX4L5 |
|
|
|
|
|
|
|
| |
3.1.3.7.11 |
DUX4L6 |
|
|
|
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|
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3.1.3.7.12 |
DUX4L7 |
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3.1.3.7.13 |
DUX4C (DUX4L9) |
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3.1.3.8 |
Subfamily: ESX |
TTAATTAA |
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3.1.3.8.1 |
ESX-1 |
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3.1.3.9 |
Subfamily: GSC |
GGATTA |
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3.1.3.9.1 |
GSC |
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3.1.3.9.2 |
GSC-2 |
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3.1.3.10 |
Subfamily: HESX |
TAATTGAATTA |
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3.1.3.10.1 |
HESX-1 |
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3.1.3.11 |
Subfamily: HOPX |
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3.1.3.11.1 |
HOPX |
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3.1.3.11.1.1 |
HOPX, isoform 1 (A) |
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3.1.3.11.1.2 |
HOPX, isoform 2 (B) |
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3.1.3.11.1.3 |
HOPX, isoform 3 |
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3.1.3.11.1.4 |
HOPX, isoform 4 |
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3.1.3.12 |
Subfamily: ISX |
CTAATTAG |
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3.1.3.12.1 |
ISX |
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3.1.3.13 |
Subfamily: LEUTX |
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3.1.3.13.1 |
LEUTX |
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3.1.3.14 |
Subfamily: MIX |
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3.1.3.14.1 |
MIXL1 |
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3.1.3.14.1.1 |
MIXL1, isoform 1 |
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3.1.3.14.1.2 |
MIXL1, isoform 2 |
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3.1.3.15 |
Subfamily: NOBOX |
CTAATTAG |
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3.1.3.15.1 |
NOBOX (OG2) |
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3.1.3.15.1.1 |
NOBOX, isoform 1 |
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3.1.3.15.1.2 |
NOBOX, isoform 2 |
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3.1.3.16 |
Subfamily: OTP |
TTAATTAA |
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3.1.3.16.1 |
OTP |
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3.1.3.17 |
Subfamily: OTX |
GGGATTAA |
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3.1.3.17.1 |
OTX-1 |
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3.1.3.17.2 |
OTX-2 |
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3.1.3.17.2.1 |
OTX-2, isoform 1 |
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3.1.3.17.2.2 |
OTX-2, isoform 2 |
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3.1.3.17.3 |
CRX (CORD-2) |
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3.1.3.18 |
Subfamily: PHOX |
ATAATTAA |
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3.1.3.18.1 |
PHOX-2A (ARIX, PMX2A) |
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3.1.3.18.2 |
PHOX-2B (PMX2B) |
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3.1.3.19 |
Subfamily: PITX |
GGGATTAA |
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3.1.3.19.1 |
PITX-1 (BFT, PTX1) |
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3.1.3.19.2 |
PITX-2 (ARP, RGS, RIEG1) |
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3.1.3.19.2.1 |
PITX-2A (ARP1A) |
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3.1.3.19.2.2 |
PITX-2B (ARP1B) |
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3.1.3.19.2.3 |
PITX-2C (ARP1C) |
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3.1.3.19.3 |
PITX-3 (PTX3) |
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3.1.3.20 |
Subfamily: PROP |
TTAATTAA |
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3.1.3.20.1 |
PROP-1 |
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| |
3.1.3.21 |
Subfamily: PRRX |
GCTAATTAGC |
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| |
3.1.3.21.1 |
PRRX-1 (PHOX1, PMX1) |
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| |
3.1.3.21.1.1 |
PMX1-A |
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3.1.3.21.1.2 |
PMX1-B |
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3.1.3.21.2 |
PRRX-2 (PMX2, PRX2) |
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| |
3.1.3.22 |
Subfamily: RAX |
CTAATTAG |
|
| |
3.1.3.22.1 |
RAX (RX) |
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3.1.3.22.1.1 |
RAX, isoform 1 |
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| |
3.1.3.22.1.2 |
RAX, isoform 2 |
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| |
3.1.3.22.2 |
RAX-2 (RAX-L1, QRX) |
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| |
3.1.3.23 |
Subfamily: RHOX |
CTAATTAG |
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| |
3.1.3.23.1 |
RHOXF-1 (OTEX, PEPP-1) |
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| |
3.1.3.23.2 |
RHOXF-2 (PEPP-2, THG) |
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3.1.3.23.3 |
RHOXF-2B |
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3.1.3.24 |
Subfamily: SEBOX |
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| |
3.1.3.24.1 |
SEBOX (OG-9) |
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3.1.3.25 |
Subfamily: SHOX |
TTAATTAA |
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| |
3.1.3.25.1 |
SHOX (PHOG) |
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| |
3.1.3.25.1.1 |
SHOXA |
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3.1.3.25.1.2 |
SHOXB |
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| |
3.1.3.25.2 |
SHOX-2 (OG-12X, SHOT) |
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| |
3.1.3.25.2.1 |
SHOX-2, isoform 1 (SHOX-2A) |
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3.1.3.25.2.2 |
SHOX-2, isoform 2 (SHOX-2B) |
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| |
3.1.3.25.2.3 |
SHOX-2, isoform 3 |
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3.1.3.26 |
Subfamily: TPRX |
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| |
3.1.3.26.1 |
TPRX-1 |
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| |
3.1.3.26.1.1 |
TPRX-1, isoform 1 |
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3.1.3.26.1.2 |
TPRX-1, isoform 2 |
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3.1.3.26.2 |
TPRXL |
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3.1.3.27 |
Subfamily: UNCX |
TTAATTAA |
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| |
3.1.3.27.1 |
UNCX (Uncx4.1) |
 |
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| |
3.1.3.28 |
Subfamily: VSX |
TTAATTAA |
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| |
3.1.3.28.1 |
VSX-1 (RINX) |
 |
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| |
3.1.3.28.1.1 |
VSX-1, isoform 1 |
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| |
3.1.3.28.1.2 |
VSX-1, isoform 2 |
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3.1.3.28.1.3 |
VSX-1, isoform 3 |
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3.1.3.28.1.4 |
VSX-1, isoform 4 |
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3.1.3.28.1.5 |
VSX-1, isoform 5 |
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3.1.3.28.1.6 |
VSX-1, isoform 6 |
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3.1.3.28.1.7 |
VSX-1, isoform 7 |
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3.1.3.28.1.8 |
VSX-1, isoform 8 |
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| |
3.1.3.28.2 |
VSX-2 (HOX10) |
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| |
3.1.4 |
Family: TALE-type homeo domain factors |
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| |
3.1.4.1 |
Subfamily: IRX (Iroquois) |
TACATGTA |
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| |
3.1.4.1.1 |
IRX-1 |
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3.1.4.1.2 |
IRX-2 |
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| |
3.1.4.1.3 |
IRX-3 |
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| |
3.1.4.1.4 |
IRX-4 |
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| |
3.1.4.1.4.1 |
IRX-4, isoform 1 |
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| |
3.1.4.1.4.2 |
IRX-4, isoform 2 |
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| |
3.1.4.1.5 |
IRX-5 |
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| |
3.1.4.1.5.1 |
IRX-5, isoform 1 |
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| |
3.1.4.1.5.2 |
IRX-5, isoform 2 |
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| |
3.1.4.1.5.3 |
IRX-5, isoform 3 |
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| |
3.1.4.1.6 |
IRX-6 |
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| |
3.1.4.2 |
Subfamily: MEIS |
AGCTGTCAA |
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| |
3.1.4.2.1 |
Meis1 |
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| |
3.1.4.2.1.1 |
Meis1, isoform 1 |
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| |
3.1.4.2.1.2 |
Meis1, isoform 2 |
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| |
3.1.4.2.2 |
Meis2 |
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| |
3.1.4.2.2.1 |
Meis2A |
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3.1.4.2.2.2 |
Meis2B |
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3.1.4.2.2.3 |
Meis2C |
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3.1.4.2.2.4 |
Meis2D |
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3.1.4.2.2.5 |
Meis2E |
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3.1.4.2.2.6 |
Meis2, isoform 6 |
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| |
3.1.4.2.2.7 |
Meis2, isoform 7 |
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| |
3.1.4.2.2.8 |
Meis2, isoform 8 |
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| |
3.1.4.2.3 |
Meis3 |
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| |
3.1.4.2.3.1 |
Meis3, isoform 1 |
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3.1.4.2.3.2 |
Meis3, isoform 2 |
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| |
3.1.4.2.3.3 |
Meis3, isoform 3 |
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| |
3.1.4.2.4 |
Meis3-L1 (MEIS3P1) |
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| |
3.1.4.2.5 |
Meis3-L2 (MEIS3P2) |
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| |
3.1.4.3 |
Subfamily: MKX (Mohawk) |
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| |
3.1.4.3.1 |
MKX (IRX-L1) |
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| |
3.1.4.4 |
Subfamily: PBX |
CATCAAT |
|
| |
3.1.4.4.1 |
PBX-1 |
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| |
3.1.4.4.1.1 |
PBX-1a |
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| |
3.1.4.4.1.2 |
PBX-1b |
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| |
3.1.4.4.1.3 |
PBX-1, isoform 3 |
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| |
3.1.4.4.2 |
PBX-2 |
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| |
3.1.4.4.3 |
PBX-3 |
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| |
3.1.4.4.3.1 |
PBX-3a |
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| |
3.1.4.4.3.2 |
PBX-3b |
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| |
3.1.4.4.3.3 |
PBX-3c |
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| |
3.1.4.4.3.4 |
PBX-3d |
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| |
3.1.4.4.3.5 |
PBX-3, isoform 5 |
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| |
3.1.4.4.4 |
PBX-4 |
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| |
3.1.4.5 |
Subfamily: PKNOX |
ACCTGTCAAT |
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| |
3.1.4.5.1 |
PKNOX-1 (PREP-1) |
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| |
3.1.4.5.1.1 |
PKNOX-1, isoform 1 |
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| |
3.1.4.5.1.2 |
PKNOX-1, isoform 2 (PKNOX-1B) |
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| |
3.1.4.5.2 |
PKNOX-2 (PREP-2) |
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| |
3.1.4.5.2.1 |
PKNOX-2, isoform 1 |
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| |
3.1.4.5.2.2 |
PKNOX-2, isoform 2 |
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| |
3.1.4.6 |
Subfamily: TGIF |
AGCTGTCAAT |
|
| |
3.1.4.6.1 |
TGIF-1 |
 |
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| |
3.1.4.6.1.1 |
TGIF-1, isoform 1 |
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| |
3.1.4.6.1.2 |
TGIF-1, isoform 2 |
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| |
3.1.4.6.1.3 |
TGIF-1, isoform 3 |
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| |
3.1.4.6.1.4 |
TGIF-1, isoform 4 |
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| |
3.1.4.6.2 |
TGIF-2 |
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| |
3.1.4.6.2.1 |
TGIF-2, isoform 1 |
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| |
3.1.4.6.2.2 |
TGIF-2, isoform 2 |
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| |
3.1.4.6.3 |
TGIF-2LX |
 |
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| |
3.1.4.6.4 |
TGIF-2LY |
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| |
3.1.5 |
Family: HD-LIM factors |
AATTAA; |
|
| |
3.1.5.1 |
Subfamily: ISL |
ATCAATTAA |
|
| |
3.1.5.1.1 |
ISL-1 (Islet-1) |
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| |
3.1.5.1.2 |
ISL-2 (Islet-2) |
 |
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|
| |
3.1.5.2 |
Subfamily: Lhx-1-like factors |
TTAATTAA |
|
| |
3.1.5.2.1 |
Lhx1 (Lim-1) |
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| |
3.1.5.2.2 |
Lhx5 |
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|
| |
3.1.5.3 |
Subfamily: Lhx-2-like factors |
TAATTA |
|
| |
3.1.5.3.1 |
Lhx2 (LH-2) |
 |
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|
| |
3.1.5.3.2 |
Lhx9 |
 |
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|
| |
3.1.5.3.2.1 |
Lhx9, isoform 1 |
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|
| |
3.1.5.3.2.2 |
Lhx9, isoform 2 |
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| |
3.1.5.3.2.3 |
Lhx9, isoform 3 |
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| |
3.1.5.3.2.4 |
Lhx9, isoform 4 |
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|
| |
3.1.5.4 |
Subfamily: Lhx-3-like factors |
TAATTA |
|
| |
3.1.5.4.1 |
Lhx3 |
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|
| |
3.1.5.4.1.1 |
Lhx3, isoform A |
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| |
3.1.5.4.1.2 |
Lhx3, isoform B |
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| |
3.1.5.4.2 |
Lhx4 |
 |
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|
| |
3.1.5.5 |
Subfamily: Lhx-6-like factors |
CTAATTAG |
|
| |
3.1.5.5.1 |
Lhx6 (Lhx6.1) |
 |
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|
| |
3.1.5.5.1.1 |
Lhx6, isoform 1 (Lhx6.1a) |
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|
| |
3.1.5.5.1.2 |
Lhx6, isoform 2 (Lhx6.1b) |
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|
| |
3.1.5.5.1.3 |
Lhx6, isoform 3 |
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|
| |
3.1.5.5.1.4 |
Lhx6, isoform 4 |
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|
| |
3.1.5.5.1.5 |
Lhx6, isoform 5 |
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|
| |
3.1.5.5.1.6 |
Lhx6, isoform 6 |
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|
| |
3.1.5.5.2 |
Lhx8 |
 |
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|
| |
3.1.5.5.2.1 |
Lhx8, isoform 1 |
|
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|
| |
3.1.5.5.2.2 |
Lhx8, isoform 2 |
|
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|
| |
3.1.5.6 |
Subfamily: Lmx |
TTAATTAA |
|
| |
3.1.5.6.1 |
Lmx-1α (LMX-1.1, LMX1A) |
 |
|
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|
| |
3.1.5.6.1.1 |
Lmx-1α, isoform 1 |
|
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|
| |
3.1.5.6.1.2 |
Lmx-1α, isoform LMX1A-4AB |
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|
| |
3.1.5.6.2 |
Lmx-1β (LMX-1.2, LMX1B) |
 |
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|
| |
3.1.5.6.2.1 |
Lmx-1β, isoform 1 (Long) |
|
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|
| |
3.1.5.6.2.2 |
Lmx-1β, isoform 2 (Short) |
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|
| |
3.1.5.6.2.3 |
Lmx-1β, isoform 3 |
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3.1.6 |
Family: HD-SINE factors |
GGTATCA |
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| |
3.1.6.1 |
Subfamily: SIX1-like factors |
GGGTATCA |
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3.1.6.1.1 |
SIX1 |
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3.1.6.1.2 |
SIX2 |
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3.1.6.2 |
Subfamily: SIX3-like factors |
GGGTATCA |
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3.1.6.2.1 |
SIX3 |
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3.1.6.2.2 |
SIX6 |
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3.1.6.3 |
Subfamily: SIX4-like factors |
GGTGTCA |
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3.1.6.3.1 |
SIX4 |
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3.1.6.3.2 |
SIX5 |
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3.1.7 |
Family: HD-PROS factors |
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3.1.7.0.1 |
PROX-1 |
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3.1.7.0.2 |
PROX-2 |
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3.1.7.0.2.1 |
PROX-2, isoform 1 |
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3.1.7.0.2.2 |
PROX-2, isoform 2 |
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3.1.8 |
Family: HD-ZF factors |
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3.1.8.1 |
Subfamily: ADNP |
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3.1.8.1.1 |
ADNP1 = 2.3.4.0.77 |
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3.1.8.1.2 |
ADNP2 (ZNF508) = 2.3.4.0.78 |
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3.1.8.2 |
Subfamily: TSHZ |
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3.1.8.2.1 |
TSHZ-1 |
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3.1.8.2.1.1 |
TSHZ-1, isoform 1 |
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3.1.8.2.1.2 |
TSHZ-1, isoform 2 |
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3.1.8.2.2 |
TSHZ-2 |
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F |
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3.1.8.2.2.1 |
TSHZ-2, isoform 1 |
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3.1.8.2.2.2 |
TSHZ-2, isoform 2 |
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3.1.8.2.3 |
TSHZ-3 |
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3.1.8.3 |
Subfamily: ZEB |
CACCTG |
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3.1.8.3.1 |
ZEB1 (TCF-8) |
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3.1.8.3.1.1 |
ZEB1, isoform 1 |
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3.1.8.3.1.2 |
ZEB1, isoform 2 |
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3.1.8.3.1.3 |
ZEB1, isoform 3 |
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3.1.8.3.1.4 |
ZEB1, isoform 4 |
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3.1.8.3.1.5 |
ZEB1, isoform 5 |
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3.1.8.3.2 |
ZEB2 (SMADIP1, SIP1) |
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3.1.8.3.2.1 |
ZEB2, isoform 1 |
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3.1.8.3.2.2 |
ZEB2, isoform 2 |
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| |
3.1.8.4 |
Subfamily: ZFHX |
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| |
3.1.8.4.1 |
ZFHX2 (ZFH-2) |
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| |
3.1.8.4.1.1 |
ZFHX2, isoform 1 |
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3.1.8.4.1.2 |
ZFHX2, isoform 2 |
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3.1.8.4.2 |
ZFHX3 (ZFH-3, ATBF1) |
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3.1.8.4.2.1 |
ZFHX3, isoform A |
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3.1.8.4.2.2 |
ZFHX3, isoform B |
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3.1.8.4.3 |
ZFHX4 (ZFH-4) |
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| |
3.1.8.4.3.1 |
ZFHX4, isoform 1 |
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3.1.8.4.3.2 |
ZFHX4, isoform 2 |
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| |
3.1.8.4.3.3 |
ZFHX4, isoform 3 |
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| |
3.1.8.4.3.4 |
ZFHX4, isoform 4 |
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| |
3.1.8.4.3.5 |
ZFHX4, isoform 5 |
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| |
3.1.8.5 |
Subfamily: ZHX |
ATCGTTTT |
|
| |
3.1.8.5.1 |
ZHX1 |
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| |
3.1.8.5.1.1 |
ZHX1, isoform 1 |
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| |
3.1.8.5.1.2 |
ZHX1, isoform 2 |
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| |
3.1.8.5.2 |
ZHX2 (AFP) |
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| |
3.1.8.5.3 |
ZHX3 (TIX1) |
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| |
3.1.8.5.3.1 |
ZHX3, isoform 1 |
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| |
3.1.8.5.3.2 |
ZHX3, isoform 2 |
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| |
3.1.8.5.4 |
HOMEZ |
 |
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| |
3.1.8.5.4.1 |
HOMEZ, isoform 1 |
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| |
3.1.8.5.4.2 |
HOMEZ, isoform 2 |
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| |
3.1.8.5.5 |
Homeo box protein C14 (NANOGNB) |
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| |
3.1.9 |
Family: HD-CUT factors |
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|
| |
3.1.9.1 |
Subfamily: ONECUT |
AAATCAAT |
|
| |
3.1.9.1.1 |
ONECUT-1 (HNF6, HNF-6α, OC-1) |
 |
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| |
3.1.9.1.2 |
ONECUT-2 (HNF-6β, OC-2) |
 |
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F |
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| |
3.1.9.1.3 |
ONECUT-3 (OC-3) |
 |
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| |
3.1.9.2 |
Subfamily: CUX |
TGATCA |
|
| |
3.1.9.2.1 |
Cux-1 (CDP, Cut-L1) |
 |
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F |
|
| |
3.1.9.2.1.1 |
Cux-1, isoform 1 |
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| |
3.1.9.2.1.2 |
Cux-1, isoform 2 |
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| |
3.1.9.2.1.3 |
Cux-1, isoform 3 |
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| |
3.1.9.2.1.4 |
Cux-1, isoform 4 (CASP) |
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| |
3.1.9.2.1.5 |
Cux-1, isoform 5 |
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| |
3.1.9.2.1.6 |
Cux-1, isoform 6 |
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| |
3.1.9.2.1.7 |
Cux-1, isoform 7 |
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| |
3.1.9.2.1.8 |
Cux-1, isoform 8 |
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| |
3.1.9.2.1.9 |
Cux-1, isoform 9 |
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| |
3.1.9.2.1.10 |
Cux-1, isoform 10 |
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| |
3.1.9.2.1.11 |
Cux-1, isoform 11 |
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|
| |
3.1.9.2.2 |
Cux-2 (Cut-L2) |
 |
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F |
|
| |
3.1.9.3 |
Subfamily: SATB |
TAATGA |
|
| |
3.1.9.3.1 |
SATB-1 |
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| |
3.1.9.3.1.1 |
SATB-1, isoform 1 |
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| |
3.1.9.3.1.2 |
SATB-1, isoform 2 |
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| |
3.1.9.3.2 |
SATB-2 |
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| |
3.1.9.3.2.1 |
SATB-2, isoform 1 |
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| |
3.1.9.3.2.2 |
SATB-2, isoform 2 |
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|
| |
3.1.10 |
Family: POU domain factors |
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|
| |
3.1.10.1 |
Subfamily: POU1 (Pit-1-like factors) |
TAATTAATTA |
|
| |
3.1.10.1.1 |
POU1F1 (Pit-1, GHF-1) |
 |
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| |
3.1.10.1.1.1 |
POU1F1, isoform A (Pit-1A, GHF-2) |
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| |
3.1.10.1.1.2 |
POU1F1, isoform B (Pit-1B, GHF-1) |
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|
| |
3.1.10.2 |
Subfamily: POU2 (Oct-1/2-like factors) |
TATGCAAAT |
|
| |
3.1.10.2.1 |
POU2F1 (Oct-1, OTF-1) |
 |
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|
| |
3.1.10.2.1.1 |
POU2F1, isoform 1 |
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| |
3.1.10.2.1.2 |
POU2F1, isoform 2 (Oct-1L) |
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| |
3.1.10.2.1.3 |
POU2F1, isoform 3 |
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| |
3.1.10.2.1.4 |
POU2F1, isoform 4 |
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| |
3.1.10.2.1.5 |
POU2F1, isoform 5 |
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| |
3.1.10.2.1.6 |
POU2F1, isoform 6 |
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| |
3.1.10.2.2 |
POU2F2 (Oct-2, OTF-2) |
 |
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| |
3.1.10.2.2.1 |
POU2F2, isoform 1 |
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| |
3.1.10.2.2.2 |
POU2F2, isoform 2 |
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| |
3.1.10.2.2.3 |
POU2F2, isoform 3 |
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| |
3.1.10.2.2.4 |
POU2F2, isoform 4 |
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| |
3.1.10.2.2.5 |
POU2F2, isoform 5 |
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| |
3.1.10.2.3 |
POU2F3 (Oct-11, OTF-11, Skn-1) |
 |
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| |
3.1.10.2.3.1 |
POU2F3, isoform 1 |
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| |
3.1.10.2.3.2 |
POU2F3, isoform 2 |
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| |
3.1.10.2.3.3 |
POU2F3, isoform 3 |
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|
| |
3.1.10.3 |
Subfamily: POU3 (Oct-6-like factors) |
TAATTAATTA |
|
| |
3.1.10.3.1 |
POU3F1 (Oct-6, OTF-6, SCIP) |
 |
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| |
3.1.10.3.2 |
POU3F2 (Oct-7, OTF-7, Brn-2) |
 |
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| |
3.1.10.3.2.1 |
POU3F2, isoform N-Oct-3 |
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| |
3.1.10.3.2.2 |
POU3F2, isoform N-Oct-5A |
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| |
3.1.10.3.2.3 |
POU3F2, isoform N-Oct-5B |
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| |
3.1.10.3.3 |
POU3F3 (Oct-8, OTF-8, Brn-1) |
 |
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| |
3.1.10.3.4 |
POU3F4 (Oct-9, OTF-9, Brn-4) |
 |
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|
| |
3.1.10.4 |
Subfamily: POU4 (Brn-3-like factors) |
ATTAATGA |
|
| |
3.1.10.4.1 |
POU4F1 (Brn-3A, Oct-T1) |
 |
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| |
3.1.10.4.1.1 |
POU4F1, isoform 1 (Brn-3A long) |
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| |
3.1.10.4.1.2 |
POU4F1, isoform 2 (Brn-3A short) |
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| |
3.1.10.4.2 |
POU4F2 (Brn-3B) |
 |
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| |
3.1.10.4.2.1 |
POU4F2, isoform 1 (Brn-3B long, Brn-3b-l) |
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| |
3.1.10.4.2.2 |
POU4F2, isoform 2 (Brn-3B short, Brn-3b-s) |
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| |
3.1.10.4.3 |
POU4F3 (Brn-3C) |
 |
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| |
3.1.10.5 |
Subfamily: POU5 (Oct-3/4-like factors) |
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|
| |
3.1.10.5.1 |
POU5F1 (Oct-3, Oct-4, OTF-3) |
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| |
3.1.10.5.1.1 |
POU5F1, isoform A (Oct-3A) |
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| |
3.1.10.5.1.2 |
POU5F1, isoform B (Oct-3B) |
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| |
3.1.10.5.2 |
POU5F1P1 (POU5F1B, Oct-3C) |
 |
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| |
3.1.10.5.3 |
POU5F2 (SPRM-1) |
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| |
3.1.10.6 |
Subfamily: POU6 (Brn-5-like factors) |
TAATGAG |
|
| |
3.1.10.6.1 |
POU6F1 (Brn-5) |
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| |
3.1.10.6.2 |
POU6F2 (Brn-5) |
 |
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|
| |
3.1.10.6.2.1 |
POU6F2, isoform 1 |
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| |
3.1.10.6.2.2 |
POU6F2, isoform 2 |
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| |
3.1.10.7 |
Subfamily: HNF1-like factors |
GTTAATGATTAAC |
|
| |
3.1.10.7.1 |
HNF-1α (HNF-1A, LF-B1) |
 |
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|
| |
3.1.10.7.1.1 |
HNF-1α, isoform A |
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|
| |
3.1.10.7.1.2 |
HNF-1α, isoform B |
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| |
3.1.10.7.1.3 |
HNF-1α, isoform C |
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| |
3.1.10.7.1.4 |
HNF-1α, isoform 4 |
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| |
3.1.10.7.1.5 |
HNF-1α, isoform 5 |
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| |
3.1.10.7.1.6 |
HNF-1α, isoform 6 |
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| |
3.1.10.7.1.7 |
HNF-1α, isoform 7 (insIVS8) |
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| |
3.1.10.7.1.8 |
HNF-1α, isoform 8 (δ2) |
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| |
3.1.10.7.2 |
HNF-1β (HNF-1B, vHNF1, LF-B3) |
 |
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|
| |
3.1.10.7.2.1 |
HNF-1β, isoform A |
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| |
3.1.10.7.2.2 |
HNF-1β, isoform B |
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| |
3.1.10.7.2.3 |
HNF-1β, isoform C |
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|
| |
3.1.10.7.2.4 |
HNF-1β, isoform 4 |
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|
| |
3.1.10.7.3 |
HMBOX1 (HNF-1LA) |
 |
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|
| |
3.1.10.7.3.1 |
HMBOX1, isoform 1 |
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| |
3.1.10.7.3.2 |
HMBOX1, isoform 2 |
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| |
3.1.10.7.3.3 |
HMBOX1, isoform 3 |
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| |
3.1.10.7.3.4 |
HMBOX1, isoform 4 |
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| |
3.1.10.7.3.5 |
HMBOX1, isoform 5 |
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|
| |
3.1.10.8 |
Subfamily: HDX-like factors |
GAAATCA |
|
| |
3.1.10.8.1 |
HDX |
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|
| |
3.1.10.8.1.1 |
HDX, isoform 1 |
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|
| |
3.1.10.8.1.2 |
HDX, isoform 2 |
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|
| |
3.1.11 |
Family: PHTF factors |
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|
| |
3.1.11.0.1 |
PHTF1 |
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|
| |
3.1.11.0.1.1 |
PHTF1, isoform 1 |
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|
| |
3.1.11.0.1.2 |
PHTF1, isoform 2 |
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|
| |
3.1.11.0.2 |
PHTF2 |
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|
| |
3.1.11.0.2.1 |
PHTF2, isoform 1 |
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|
| |
3.1.11.0.2.2 |
PHTF2, isoform 2 |
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|
| |
3.1.11.0.2.3 |
PHTF2, isoform 3 |
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|
| |
3.1.11.0.2.4 |
PHTF2, isoform 4 |
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|
| |
3.1.11.0.2.5 |
PHTF2, isoform 5 |
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| |
3.1.11.0.2.6 |
PHTF2, isoform 6 |
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|
| |
3.1.11.0.2.7 |
PHTF2, isoform 7 |
|
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|
| |
3.2 |
Class: Paired box factors |
|
|
|
| |
3.2.1 |
Family: Paired plus homeo domain |
CTAATTAG |
|
| |
3.2.1.1 |
Subfamily: PAX-3/7 |
CTAATTAG |
|
| |
3.2.1.1.1 |
Pax-3 (HuP2) |
 |
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|
| |
3.2.1.1.1.1 |
Pax-3 |
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|
| |
3.2.1.1.1.2 |
Pax-3A |
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|
| |
3.2.1.1.1.3 |
Pax-3B |
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|
| |
3.2.1.1.1.4 |
Pax-3G |
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|
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| |
3.2.1.1.1.5 |
Pax-3H |
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| |
3.2.1.1.1.6 |
Pax-3, isoform 6 |
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| |
3.2.1.1.1.7 |
Pax-3, isoform 7 |
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| |
3.2.1.1.1.8 |
Pax-3E |
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| |
3.2.1.1.2 |
Pax-7 (HuP1) |
 |
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| |
3.2.1.1.2.1 |
Pax-7, isoform long |
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| |
3.2.1.1.2.2 |
Pax-7, isoform short |
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| |
3.2.1.1.2.3 |
Pax-7, isoform 3 |
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| |
3.2.1.2 |
Subfamily: PAX-4/6 |
CTAATTAG |
|
| |
3.2.1.2.1 |
Pax-4 |
 |
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| |
3.2.1.2.1.1 |
Pax-4, isoform 1 |
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| |
3.2.1.2.1.2 |
Pax-4, isoform 2 |
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3.2.1.2.1.3 |
Pax-4, isoform 3 |
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| |
3.2.1.2.2 |
Pax-6 (AN2) |
 |
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| |
3.2.1.2.2.1 |
Pax-6, isoform 1 |
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3.2.1.2.2.2 |
Pax-6, isoform 3 |
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| |
3.2.1.2.2.3 |
Pax-6-5a, isoform 5a |
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| |
3.2.2 |
Family: Paired domain only |
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| |
3.2.2.1 |
Subfamily: PAX-1/9 (no homeo remnant) |
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| |
3.2.2.1.1 |
Pax-1 (HuP48) |
 |
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| |
3.2.2.1.1.1 |
Pax-1, isoform 1 |
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3.2.2.1.1.2 |
Pax-1, isoform 2 |
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3.2.2.1.1.3 |
Pax-1, isoform 3 |
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3.2.2.1.2 |
Pax-9 |
 |
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| |
3.2.2.2 |
Subfamily: PAX-2-like factors (partial homeobox) |
GTCATGCGTGA |
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| |
3.2.2.2.1 |
Pax-2 |
 |
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| |
3.2.2.2.1.1 |
Pax-2, isoform 1 |
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3.2.2.2.1.2 |
Pax-2, isoform 2 |
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| |
3.2.2.2.1.3 |
Pax-2, isoform 3 |
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| |
3.2.2.2.1.4 |
Pax-2, isoform 4 |
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| |
3.2.2.2.2 |
Pax-5 |
 |
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| |
3.2.2.2.2.1 |
Pax-5, isoform 1 |
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| |
3.2.2.2.2.2 |
Pax-5, isoform 2 (δ9) |
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| |
3.2.2.2.2.3 |
Pax-5, isoform 3 (δ78) |
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3.2.2.2.2.4 |
Pax-5, isoform 4 (δ789) |
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3.2.2.2.2.5 |
Pax-5, isoform 5 (δ8) |
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| |
3.2.2.2.2.6 |
Pax-5, isoform 6 (δ7) |
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3.2.2.2.2.7 |
Pax-5, isoform 7 |
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3.2.2.2.2.8 |
Pax-5, isoform 8 |
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3.2.2.2.2.9 |
Pax-5, isoform 9 |
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| |
3.2.2.2.2.10 |
Pax-5, isoform 10 |
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| |
3.2.2.2.2.11 |
Pax-5, isoform 11 |
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| |
3.2.2.2.3 |
Pax-8 |
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| |
3.2.2.2.3.1 |
Pax-8a, isoform 1 |
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| |
3.2.2.2.3.2 |
Pax-8b, isoform 2 |
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3.2.2.2.3.3 |
Pax-8c, isoform 3 |
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| |
3.2.2.2.3.4 |
Pax-8d, isoform 4 |
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| |
3.2.2.2.3.5 |
Pax-8e, isoform 5 |
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| |
3.3 |
Class: Fork head / winged helix factors |
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| |
3.3.1 |
Family: Forkhead box (FOX) factors |
TGTTT |
|
| |
3.3.1.1 |
Subfamily: FOXA |
TGTTTGTTT |
|
| |
3.3.1.1.1 |
FOXA1 (HNF-3α) |
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| |
3.3.1.1.1.1 |
FOXA1, isoform 1 |
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| |
3.3.1.1.1.2 |
FOXA1, isoform 2 |
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| |
3.3.1.1.2 |
FOXA2 (HNF-3β) |
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| |
3.3.1.1.2.1 |
FOXA2, isoform 1 |
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| |
3.3.1.1.2.2 |
FOXA2, isoform 2 |
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| |
3.3.1.1.3 |
FOXA3 (HNF-3γ) |
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| |
3.3.1.2 |
Subfamily: FOXB |
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| |
3.3.1.2.1 |
FOXB1 (Fkh-5) |
 |
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| |
3.3.1.2.2 |
FOXB2 |
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| |
3.3.1.3 |
Subfamily: FOXC |
TGTTTATTTAC |
|
| |
3.3.1.3.1 |
FOXC1 (Fkh-L7, FREAC3) |
 |
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| |
3.3.1.3.2 |
FOXC2 (Fkh-L14) |
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| |
3.3.1.4 |
Subfamily: FOXD |
TGTTTACTTAAG |
|
| |
3.3.1.4.1 |
FOXD1 (Fkh-L8, FREAC4) |
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| |
3.3.1.4.2 |
FOXD2 (Fkh-L17, FREAC9) |
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| |
3.3.1.4.3 |
FOXD3 (HFH-2) |
 |
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F |
|
| |
3.3.1.4.4 |
FOXD4 (Fkh-L9, FREAC5) |
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F |
|
| |
3.3.1.4.5 |
FOXD4L1 |
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| |
3.3.1.4.7 |
FOXD4L3 |
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| |
3.3.1.4.8 |
FOXD4L4 (FOXD4B) |
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| |
3.3.1.4.9 |
FOXD4L5 |
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| |
3.3.1.4.10 |
FOXD4L6 |
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| |
3.3.1.5 |
Subfamily: FOXE |
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| |
3.3.1.5.1 |
FOXE1 (FOXE2, Fkh-L15) |
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| |
3.3.1.5.2 |
FOXE3 (Fkh-L12, FREAC8) |
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| |
3.3.1.6 |
Subfamily: FOXF |
TGTTTATATG |
|
| |
3.3.1.6.1 |
FOXF1 (Fkh-L5, FREAC1) |
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| |
3.3.1.6.2 |
FOXF2 (Fkh-L6, FREAC2) |
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| |
3.3.1.7 |
Subfamily: FOXG |
TTTGTTTTT |
|
| |
3.3.1.7.1 |
FOXG1 (Fkh-2) |
 |
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| |
3.3.1.8 |
Subfamily: FOXH |
TGTGTATT |
|
| |
3.3.1.8.1 |
FOXH1 |
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| |
3.3.1.9 |
Subfamily: FOXI |
TGTTTGTTTA |
|
| |
3.3.1.9.1 |
FOXI1 (Fkh-L10, FREAC6) |
 |
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| |
3.3.1.9.1.1 |
FOXI1, isoform 1 |
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| |
3.3.1.9.1.2 |
FOXI1, isoform 2 |
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| |
3.3.1.9.2 |
FOXI2 |
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| |
3.3.1.9.3 |
FOXI3 |
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| |
3.3.1.10 |
Subfamily: FOXJ |
TGTTTGTTTA |
|
| |
3.3.1.10.1 |
FOXJ1 (Fkh-L13, HFH-4) |
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| |
3.3.1.10.2 |
FOXJ2 (Fkx) |
 |
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| |
3.3.1.10.2.1 |
FOXJ2.L |
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| |
3.3.1.10.2.2 |
FOXJ2.S |
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| |
3.3.1.10.3 |
FOXJ3 (Fkx) |
 |
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| |
3.3.1.10.3.1 |
FOXJ3, isoform 1 |
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| |
3.3.1.10.3.2 |
FOXJ3, isoform 2 |
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| |
3.3.1.11 |
Subfamily: FOXK |
TTGTTTAC |
|
| |
3.3.1.11.1 |
FOXK1 |
 |
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| |
3.3.1.11.1.1 |
FOXK1-a, isoform 1 |
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| |
3.3.1.11.1.2 |
FOXK1-b, isoform 2 |
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| |
3.3.1.11.2 |
FOXK2 |
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|
F |
|
| |
3.3.1.11.2.1 |
FOXK2, isoform 1 (FOXK2a) |
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| |
3.3.1.11.2.2 |
FOXK2, isoform 2 (FOXK2b) |
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| |
3.3.1.11.2.3 |
FOXK2, isoform 3 (FOXK2c) |
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|
| |
3.3.1.12 |
Subfamily: FOXL |
TGTTTATGT |
|
| |
3.3.1.12.1 |
FOXL1 (Fkh-L11, FREAC7) |
 |
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| |
3.3.1.12.2 |
FOXL2 |
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| |
3.3.1.13 |
Subfamily: FOXM |
CTGTTTAT |
|
| |
3.3.1.13.1 |
FOXM1 (Fkh-L11, FREAC7) |
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|
| |
3.3.1.13.1.1 |
FOXM1, isoform 1 (FoxM1C) |
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| |
3.3.1.13.1.2 |
FOXM1, isoform 2 (FoxM1B) |
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| |
3.3.1.13.1.3 |
FOXM1, isoform 4 (FoxM1A) |
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| |
3.3.1.14 |
Subfamily: FOXN |
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|
| |
3.3.1.14.1 |
FOXN1 (Whn) |
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F |
|
| |
3.3.1.14.2 |
FOXN2 (HTLF) |
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| |
3.3.1.14.2.1 |
FOXN2, isoform 1 |
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| |
3.3.1.14.2.2 |
FOXN2, isoform 2 |
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| |
3.3.1.14.3 |
FOXN3 (CHES1) |
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|
| |
3.3.1.14.3.1 |
FOXN3, isoform 1 |
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| |
3.3.1.14.3.2 |
FOXN3, isoform 2 |
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| |
3.3.1.14.4 |
FOXN4 |
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| |
3.3.1.14.4.1 |
FOXN4, isoform 1 |
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| |
3.3.1.14.4.2 |
FOXN4, isoform 2 |
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| |
3.3.1.14.4.3 |
FOXN4, isoform 3 |
|
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|
| |
3.3.1.15 |
Subfamily: FOXO |
TTGTTTAC |
|
| |
3.3.1.15.1 |
FOXO1 (FKHR) |
 |
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| |
3.3.1.15.2 |
FOXO3 (FKHR-L1) |
 |
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| |
3.3.1.15.2.1 |
FOXO3, isoform 1 |
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| |
3.3.1.15.2.2 |
FOXO3, isoform 2 |
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| |
3.3.1.15.3 |
FOXO4 |
 |
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| |
3.3.1.15.3.1 |
FOXO4-a, isoform 1 |
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| |
3.3.1.15.3.2 |
FOXO4-b, isoform 2 |
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| |
3.3.1.15.4 |
FOXO6 |
 |
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|
| |
3.3.1.16 |
Subfamily: FOXP |
TTGTTTCA |
|
| |
3.3.1.16.1 |
FOXP1 |
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|
| |
3.3.1.16.1.1 |
FOXP1, isoform 1 |
|
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|
| |
3.3.1.16.1.2 |
FOXP1, isoform 2 |
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|
| |
3.3.1.16.1.3 |
FOXP1, isoform 3 |
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|
| |
3.3.1.16.1.4 |
FOXP1, isoform 4 |
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|
| |
3.3.1.16.1.5 |
FOXP1, isoform 5 |
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| |
3.3.1.16.1.6 |
FOXP1, isoform 6 |
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|
| |
3.3.1.16.1.7 |
FOXP1, isoform 7 |
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|
| |
3.3.1.16.2 |
FOXP2 |
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|
| |
3.3.1.16.2.1 |
FOXP2 I, isoform 1 |
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|
| |
3.3.1.16.2.2 |
FOXP2 II, isoform 2 |
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| |
3.3.1.16.2.3 |
FOXP2 III;IV, isoform 3 |
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|
| |
3.3.1.16.2.4 |
FOXP2, isoform 4 |
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|
| |
3.3.1.16.2.5 |
FOXP2, isoform 5 |
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|
| |
3.3.1.16.2.6 |
FOXP2-S, isoform 6 |
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|
| |
3.3.1.16.2.7 |
FOXP2, isoform 7 |
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|
| |
3.3.1.16.2.8 |
FOXP2, isoform 8 |
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|
| |
3.3.1.16.2.9 |
FOXP2, isoform 9 |
|
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|
| |
3.3.1.16.3 |
FOXP3 |
 |
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|
| |
3.3.1.16.3.1 |
FOXP3, isoform 1 |
|
|
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|
| |
3.3.1.16.3.2 |
FOXP3, isoform 2 |
|
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|
| |
3.3.1.16.3.3 |
FOXP3, isoform 3 |
|
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|
| |
3.3.1.16.3.4 |
FOXP3, isoform 4 |
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|
| |
3.3.1.16.4 |
FOXP4 (FKHLA) |
|
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|
| |
3.3.1.16.4.1 |
FOXP4, isoform 1 |
|
|
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|
|
| |
3.3.1.16.4.2 |
FOXP4, isoform 2 |
|
|
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|
| |
3.3.1.16.4.3 |
FOXP4, isoform 3 |
|
|
|
|
|
| |
3.3.1.17 |
Subfamily: FOXQ |
|
|
| |
3.3.1.17.1 |
FOXQ1 (HFH-1) |
|
|
|
|
|
|
|
| |
3.3.1.18 |
Subfamily: FOXR |
|
|
| |
3.3.1.18.1 |
FOXR1 |
|
|
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|
| |
3.3.1.18.1.1 |
FOXR1, isoform 1 |
|
|
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|
| |
3.3.1.18.1.2 |
FOXR1, isoform 2 |
|
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|
| |
3.3.1.18.2 |
FOXR2 |
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|
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|
|
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|
| |
3.3.1.19 |
Subfamily: FOXS |
|
|
| |
3.3.1.19.1 |
FOXS1 (Fkh-L18, FREAC10) |
|
|
|
|
|
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|
| |
3.3.2 |
Family: E2F-related factors |
|
|
| |
3.3.2.1 |
Subfamily: E2F |
|
|
| |
3.3.2.1.1 |
E2F-1 |
 |
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|
| |
3.3.2.1.2 |
E2F-2 |
 |
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|
| |
3.3.2.1.3 |
E2F-3 |
 |
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|
| |
3.3.2.1.3.1 |
E2F-3, isoform 1 |
|
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|
| |
3.3.2.1.3.2 |
E2F-3, isoform 2 |
|
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|
| |
3.3.2.1.4 |
E2F-4 |
 |
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|
| |
3.3.2.1.5 |
E2F-5 |
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|
F |
|
| |
3.3.2.1.5.1 |
E2F-5, isoform 1 |
|
|
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|
| |
3.3.2.1.5.2 |
E2F-5, isoform 2 |
|
|
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|
| |
3.3.2.1.5.3 |
E2F-5, isoform 3 |
|
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|
| |
3.3.2.1.6 |
E2F-6 |
|
|
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|
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|
| |
3.3.2.1.6.1 |
E2F-6, isoform 1 |
|
|
|
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|
| |
3.3.2.1.6.2 |
E2F-6, isoform 2 |
|
|
|
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|
| |
3.3.2.1.6.3 |
E2F-6, isoform 3 |
|
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| |
3.3.2.1.7 |
E2F-7 |
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3.3.2.1.7.1 |
E2F-7, isoform 1 |
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3.3.2.1.7.2 |
E2F-7, isoform 2 |
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3.3.2.1.7.3 |
E2F-7, isoform 3 |
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3.3.2.1.8 |
E2F-8 |
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3.3.2.2 |
Subfamily: Dp-1 |
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3.3.2.2.1 |
Dp-1 (DRTF-1) |
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3.3.2.2.1.1 |
Dp-1, isoform 1 |
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3.3.2.2.1.2 |
Dp-1, isoform 2 |
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3.3.2.2.2 |
Dp-2 (Dp-3) |
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3.3.2.2.2.1 |
Dp-2α, isoform 1 |
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3.3.2.2.2.2 |
Dp-2β, isoform 2 |
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3.3.2.2.2.3 |
Dp-2γ, isoform 3 |
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3.3.2.2.2.4 |
Dp-2δ, isoform 4 |
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3.3.2.2.2.5 |
Dp-2ε, isoform 5 |
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3.3.2.2.2.6 |
Dp-2, isoform 6 |
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3.3.2.2.2.7 |
Dp-2, isoform 7 |
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3.3.2.2.2.8 |
Dp-2, isoform 8 |
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3.3.3 |
Family: RFX-related factors |
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3.3.3.0.1 |
RFX1 (EF-C) |
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3.3.3.0.2 |
RFX2 |
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3.3.3.0.2.1 |
RFX2, isoform 1 |
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3.3.3.0.2.2 |
RFX2, isoform 2 |
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3.3.3.0.3 |
RFX3 |
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3.3.3.0.3.1 |
RFX3, isoform 1 |
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3.3.3.0.3.2 |
RFX3, isoform 2 |
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3.3.3.0.3.3 |
RFX3, isoform 3 |
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3.3.3.0.4 |
RFX4 |
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3.3.3.0.4.1 |
RFX4-A, isoform 3 |
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3.3.3.0.4.2 |
RFX4-B, isoform 4 |
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| |
3.3.3.0.4.3 |
RFX4-C, isoform 2 |
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3.3.3.0.4.4 |
RFX4-D, isoform 1 |
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| |
3.3.3.0.5 |
RFX5 |
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3.3.3.0.5.1 |
RFX5, isoform 1 |
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| |
3.3.3.0.5.2 |
RFX5, isoform 2 |
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3.3.3.0.6 |
RFX6 (RFXDC-1) |
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| |
3.3.3.0.7 |
RFX7 (RFXDC-2) |
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| |
3.3.3.0.7.1 |
RFX7, isoform 1 |
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| |
3.3.3.0.7.2 |
RFX7, isoform 2 |
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| |
3.3.3.0.8 |
RFX8 |
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| |
3.3.3.0.8.1 |
RFX8, isoform 1 |
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3.3.3.0.8.2 |
RFX8, isoform 2 |
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3.3.3.0.8.3 |
RFX8, isoform 3 |
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| |
3.4 |
Class: Heat shock factors |
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| |
3.4.1 |
Family: HSF factors |
TTCCAGAAGCTTC |
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| |
3.4.1.0.1 |
HSF1 (HSTF1) |
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| |
3.4.1.0.1.1 |
HSF1, isoform long |
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3.4.1.0.1.2 |
HSF1, isoform short |
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| |
3.4.1.0.2 |
HSF2 (HSTF2) |
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| |
3.4.1.0.2.1 |
HSF2A, isoform 1 |
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3.4.1.0.2.2 |
HSF2B, isoform 2 |
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| |
3.4.1.0.3 |
HSF4 (HSTF4) |
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| |
3.4.1.0.3.1 |
HSF4, isoform HSF4A |
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| |
3.4.1.0.3.2 |
HSF4, isoform HSF4B |
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| |
3.4.1.0.4 |
HSF5 (HSTF5) |
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F |
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| |
3.4.1.0.4.1 |
HSF5, isoform 1 |
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| |
3.4.1.0.4.2 |
HSF5, isoform 2 |
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| |
3.4.1.0.5 |
HSFX1 (HSFX2, LW-1) |
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| |
3.4.1.0.6 |
HSFY1 (HSFY2, HSF2L) |
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| |
3.4.1.0.6.1 |
HSFY1, isoform 1 |
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| |
3.4.1.0.6.2 |
HSFY1, isoform 2 |
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| |
3.4.1.0.6.3 |
HSFY1, isoform 3 |
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| |
3.5 |
Class: Tryptophan cluster factors |
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| |
3.5.1 |
Family: Myb/SANT domain factors |
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|
| |
3.5.1.1 |
Subfamily: Myb-like factors |
CAGTTG |
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| |
3.5.1.1.1 |
c-Myb |
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| |
3.5.1.1.1.1 |
c-Myb, isoform 1 |
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| |
3.5.1.1.1.2 |
c-Myb, isoform 2 |
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| |
3.5.1.1.1.3 |
c-Myb, isoform 3 |
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| |
3.5.1.1.1.4 |
c-Myb, isoform 4 |
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| |
3.5.1.1.1.5 |
c-Myb, isoform 5 |
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| |
3.5.1.1.1.6 |
c-Myb, isoform 6 |
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| |
3.5.1.1.1.7 |
c-Myb, isoform 7 |
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| |
3.5.1.1.1.8 |
c-Myb, isoform 8 |
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| |
3.5.1.1.1.9 |
c-Myb, isoform 9 |
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| |
3.5.1.1.1.10 |
c-Myb, isoform 10 |
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| |
3.5.1.1.1.11 |
c-Myb, isoform 11 |
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| |
3.5.1.1.1.12 |
c-Myb, isoform 12 |
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| |
3.5.1.1.2 |
A-Myb (Myb-L1) |
 |
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| |
3.5.1.1.2.1 |
A-Myb, isoform 1 |
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| |
3.5.1.1.2.2 |
A-Myb, isoform 2 |
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| |
3.5.1.1.3 |
B-Myb (Myb-L2) |
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| |
3.5.1.1.3.1 |
B-Myb, isoform 1 |
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| |
3.5.1.1.3.2 |
B-Myb, isoform 2 |
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| |
3.5.1.1.4 |
CDC5L |
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| |
3.5.1.1.5 |
SNAPc4 (PTFα) |
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| |
3.5.1.2 |
Subfamily: NCoR-like factors |
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| |
3.5.1.2.1 |
NCoR1 |
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| |
3.5.1.2.1.1 |
NCoR1, isoform 1 |
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3.5.1.2.1.2 |
NCoR1, isoform 2 |
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| |
3.5.1.2.1.3 |
NCoR1, isoform 3 |
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| |
3.5.1.2.2 |
NCoR2 |
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| |
3.5.1.2.2.1 |
NCoR2, isoform 1 (TRAC-2, SMRT-α, h-SMRT) |
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| |
3.5.1.2.2.2 |
NCoR2, isoform 2 (TRAC-1) |
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| |
3.5.1.2.2.4 |
NCoR2, isoform 3 (SMRTe) |
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| |
3.5.1.2.2.5 |
NCoR2, isoform 4 (SMRT-τ) |
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| |
3.5.1.2.3 |
RCoR1 |
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F |
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| |
3.5.1.2.4 |
RCoR2 |
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3.5.1.2.5 |
RCoR3 |
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| |
3.5.1.2.5.1 |
RCoR3, isoform 1 |
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| |
3.5.1.2.5.2 |
RCoR3, isoform 2 |
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| |
3.5.1.2.5.3 |
RCoR3, isoform 3 |
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3.5.1.2.5.4 |
RCoR3, isoform 4 |
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| |
3.5.1.3 |
Subfamily: MIER-like factors |
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| |
3.5.1.3.1 |
MIER1 |
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| |
3.5.1.3.1.1 |
MIER1, isoform 1 (N3-β) |
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3.5.1.3.1.2 |
MIER1, isoform 2 (N2-β) |
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3.5.1.3.1.3 |
MIER1, isoform 3 (N1-β) |
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3.5.1.3.1.4 |
MIER1, isoform 4 (N1-α) |
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3.5.1.3.1.5 |
MIER1, isoform 5 (N2-α) |
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3.5.1.3.1.6 |
MIER1, isoform 6 (N3-α) |
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3.5.1.3.1.7 |
MIER1, isoform 7 |
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3.5.1.3.1.8 |
MIER1, isoform 8 |
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3.5.1.3.1.9 |
MIER1, isoform 9 |
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3.5.1.3.1.10 |
MIER1, isoform 10 |
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3.5.1.3.2 |
MIER2 |
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| |
3.5.1.3.3 |
MIER3 |
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| |
3.5.1.3.3.1 |
MIER3, isoform 1 |
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3.5.1.3.3.2 |
MIER3, isoform 2 |
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3.5.1.3.3.3 |
MIER3, isoform 3 |
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3.5.1.3.3.4 |
MIER3, isoform 4 |
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3.5.1.3.3.5 |
MIER3, isoform 5 |
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3.5.1.3.4 |
MTA1 = 2.2.1.2.5 |
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| |
3.5.1.3.4.1 |
MTA1, isoform long |
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3.5.1.3.4.2 |
MTA1, isoform short (MTA1S) |
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3.5.1.3.4.3 |
MTA1, isoform 3 |
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| |
3.5.1.3.5 |
MTA2 (MTA1-L1) = 2.2.1.2.6 |
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| |
3.5.1.3.5.1 |
MTA2, isoform 1 |
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3.5.1.3.5.2 |
MTA2, isoform 2 |
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| |
3.5.1.3.6 |
MTA3 = 2.2.1.2.7 |
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F |
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| |
3.5.1.3.6.1 |
MTA3, isoform 1 |
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3.5.1.3.6.2 |
MTA3, isoform 2 |
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3.5.1.3.7 |
RERE (ARG, ARP, ATN1L) = 2.2.1.2.4 |
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3.5.1.3.7.1 |
RERE, isoform 1 |
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3.5.1.3.7.2 |
RERE, isoform 2 |
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3.5.1.3.8 |
DMAP1 |
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| |
3.5.1.3.9 |
TRERF1 (Rapa, TReP-132) = 2.3.4.20.1 |
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| |
3.5.1.3.9.1 |
TRERF1, isoform 1 |
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3.5.1.3.9.2 |
TRERF1, isoform 2 (Rapa-1) |
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3.5.1.3.9.3 |
TRERF1, isoform 3 (Rapa-2) |
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3.5.1.3.9.4 |
TRERF1, isoform 4 |
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3.5.1.3.9.5 |
TRERF1, isoform 5 |
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| |
3.5.1.3.10 |
ZNF541 = 2.3.4.20.2 |
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| |
3.5.1.3.10.2 |
ZNF541, isoform 2 |
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3.5.1.3.10.3 |
ZNF541, isoform 3 |
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| |
3.5.1.3.11 |
CRAMP1L (HN1L) |
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| |
3.5.1.3.12 |
ELMSAN1 (C14orf43) |
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| |
3.5.1.4 |
Subfamily: DNAJC-like factors |
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| |
3.5.1.4.1 |
DNAJC1 |
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| |
3.5.1.4.2 |
DNAJC2 (ZRF1) |
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| |
3.5.1.4.2.1 |
DNAJC2, isoform 1 |
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3.5.1.4.2.2 |
DNAJC2, isoform 2 |
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| |
3.5.1.5 |
Subfamily: SMARCA-like factors |
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| |
3.5.1.5.1 |
SMARCA1 (SNF2L) |
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| |
3.5.1.5.1.1 |
SMARCA1, isoform 1 |
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| |
3.5.1.5.1.2 |
SMARCA1, isoform 2 |
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| |
3.5.1.5.2 |
SMARCA5 (SNF2H) |
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| |
3.5.1.6 |
Subfamily: TADA2-like factors |
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| |
3.5.1.6.1 |
TAD-2α (TADA2A, ADA2-like) |
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| |
3.5.1.6.1.1 |
TAD-2α, isoform 1 |
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| |
3.5.1.6.1.2 |
TAD-2α, isoform 2 |
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| |
3.5.1.6.2 |
TAD-2β (TADA2B, ADA2-β) |
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| |
3.5.1.6.2.1 |
TAD-2β, isoform 1 |
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| |
3.5.1.6.2.2 |
TAD-2β, isoform 2 |
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| |
3.5.1.6.2.3 |
TAD-2β, isoform 3 |
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| |
3.5.1.6.3 |
SMARCC1 (BAF155) |
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| |
3.5.1.6.4 |
SMARCC2 (BAF170) |
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| |
3.5.1.6.4.1 |
SMARCC2, isoform 1 (SMARCC2a) |
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| |
3.5.1.6.4.2 |
SMARCC2, isoform 2 (SMARCC2b) |
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| |
3.5.1.6.4.3 |
SMARCC2, isoform 3 |
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| |
3.5.1.7 |
Subfamily: DMTF-like factors |
CCCGGATGT |
|
| |
3.5.1.7.1 |
DMTF1 |
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| |
3.5.1.7.1.1 |
DMTF1α, isoform 1 |
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| |
3.5.1.7.1.2 |
DMTF1β, isoform 2 |
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| |
3.5.1.7.1.3 |
DMTF1γ, isoform 3 |
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| |
3.5.1.7.1.4 |
DMTF1, isoform 4 |
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| |
3.5.1.7.1.5 |
DMTF1, isoform 5 |
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| |
3.5.1.0 |
Subfamily: Other Myb-like factors |
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|
| |
3.5.1.0.1 |
MSANTD1 |
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| |
3.5.1.0.2 |
MSANTD2 |
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| |
3.5.1.0.2.1 |
MSANTD2, isoform 1 |
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| |
3.5.1.0.2.2 |
MSANTD2, isoform 2 |
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| |
3.5.1.0.2.3 |
MSANTD2, isoform 3 |
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| |
3.5.1.0.3 |
MSANTD3 |
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| |
3.5.1.0.3.1 |
MSANTD3, isoform 1 |
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| |
3.5.1.0.3.2 |
MSANTD3, isoform 2 |
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3.5.1.0.4 |
MSANTD4 |
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3.5.1.0.5 |
MYPOP |
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3.5.2 |
Family: Ets-related factors |
GGAAG |
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| |
3.5.2.1 |
Subfamily: Ets-like factors |
CCGGAAG |
|
| |
3.5.2.1.1 |
c-Ets-1 |
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3.5.2.1.1.1 |
c-Ets-1A (Ets-1 p51) |
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3.5.2.1.1.2 |
c-Ets-1B (Ets-1 p42) |
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3.5.2.1.1.3 |
c-Ets-1, isoform 3 |
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3.5.2.1.1.4 |
c-Ets-1, isoform p27 (Δ(III-VI)) |
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3.5.2.1.1.5 |
c-Ets-1, isoform 5 |
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| |
3.5.2.1.2 |
c-Ets-2 |
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3.5.2.1.3 |
ETV2 |
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3.5.2.1.3.1 |
ETV2, isoform 1 |
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3.5.2.1.3.2 |
ETV2, isoform 2 |
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3.5.2.1.4 |
GABPα (E4TF1-60, NRSF-2α) |
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3.5.2.1.5 |
Fli-1 |
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3.5.2.1.5.1 |
Fli-1, isoform 1 |
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3.5.2.1.5.2 |
Fli-1, isoform 2 |
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3.5.2.1.5.3 |
Fli-1, isoform 3 |
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3.5.2.1.5.4 |
Fli-1, isoform 4 |
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3.5.2.1.6 |
ERG |
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3.5.2.1.6.1 |
ERG, isoform ERG-1 |
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3.5.2.1.6.2 |
ERG, isoform ERG-2 |
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3.5.2.1.6.3 |
ERG, isoform ERG-3 |
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3.5.2.1.6.4 |
ERG, isoform 5 (p55erg) |
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3.5.2.1.6.5 |
ERG, isoform 7 |
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3.5.2.1.6.6 |
ERG, isoform 8 |
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3.5.2.1.6.7 |
ERG, isoform p38erg |
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3.5.2.1.6.8 |
ERG, isoform p49erg |
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| |
3.5.2.1.7 |
FEV (Pet-1) |
 |
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3.5.2.1.8 |
ETV3 (PE-1) |
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3.5.2.1.8.1 |
ETV3 long, isoform 1 |
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3.5.2.1.8.2 |
ETV3 short, isoform 2 |
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3.5.2.1.9 |
ETV3L |
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3.5.2.1.10 |
ERF |
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F |
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3.5.2.1.10.1 |
ERF, isoform 1 |
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3.5.2.1.10.2 |
ERF, isoform 2 |
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3.5.2.2 |
Subfamily: Elk-like factors |
CCGGAAG |
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| |
3.5.2.2.1 |
Elk-1 |
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3.5.2.2.1.1 |
Elk-1, isoform 1 |
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3.5.2.2.1.2 |
ELKV, isoform 2 |
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3.5.2.2.2 |
Elk-3 (SAP-2) |
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3.5.2.2.3 |
Elk-4 (SAP-1) |
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3.5.2.2.3.1 |
SAP-1A, isoform 1 |
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3.5.2.2.3.2 |
SAP-1B, isoform 2 |
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3.5.2.2.4 |
ETV1 |
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3.5.2.2.4.1 |
ETV1, isoform 1 |
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3.5.2.2.4.2 |
ETV1, isoform 2 |
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3.5.2.2.4.3 |
ETV1, isoform 3 |
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3.5.2.2.4.4 |
ETV1, isoform 4 |
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3.5.2.2.4.5 |
ETV1, isoform 5 |
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3.5.2.2.4.6 |
ETV1, isoform 6 |
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3.5.2.2.5 |
ETV4 (E1A-F, PEA3) |
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3.5.2.2.5.1 |
ETV4, isoform 1 |
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3.5.2.2.5.2 |
ETV4, isoform 2 |
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3.5.2.2.5.3 |
ETV4, isoform 3 |
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3.5.2.2.6 |
ETV5 (Erm) |
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3.5.2.2.6.1 |
ETV5, isoform 1 |
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3.5.2.2.6.2 |
ETV5, isoform 2 |
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3.5.2.3 |
Subfamily: Elf-1-like factors |
CCGGAAAT |
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| |
3.5.2.3.1 |
Elf-1 |
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3.5.2.3.1.1 |
Elf-1, isoform 1 |
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3.5.2.3.1.2 |
Elf-1, isoform 2 |
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3.5.2.3.2 |
Elf-2 (NERF) |
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3.5.2.3.2.1 |
Elf-2, isoform 1 (NERF-2a) |
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3.5.2.3.2.2 |
Elf-2, isoform 2 (NERF-1a) |
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3.5.2.3.2.3 |
Elf-2, isoform 3 (NERF-1b) |
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3.5.2.3.2.4 |
Elf-2, isoform 4 |
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3.5.2.3.2.5 |
Elf-2, isoform 5 (NERF-2b) |
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3.5.2.3.3 |
Elf-4 (ELFR, MEF) |
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| |
3.5.2.4 |
Subfamily: EHF-like factors |
CCGGAAGT |
|
| |
3.5.2.4.1 |
EHF (ESE-3) |
 |
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| |
3.5.2.4.1.1 |
ESE-3A, isoform 2 |
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3.5.2.4.1.2 |
ESE-3B, isoform 1 |
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3.5.2.4.1.3 |
ESE-3, isoform 3 |
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| |
3.5.2.4.2 |
Elf-3 (ESE-1) |
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| |
3.5.2.4.2.1 |
ESE-1a, isoform 2 |
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3.5.2.4.2.2 |
ESE-1b, isoform 1 |
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3.5.2.4.3 |
Elf-5 (ESE-2) |
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| |
3.5.2.4.3.1 |
Elf-5, isoform 1 (ESE-2a) |
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3.5.2.4.3.2 |
Elf-5, isoform 2 (ESE-2b) |
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3.5.2.4.3.3 |
Elf-5, isoform 3 |
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3.5.2.4.3.4 |
Elf-5, isoform 4 |
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| |
3.5.2.5 |
Subfamily: Spi-like factors |
AGAGGAAG |
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| |
3.5.2.5.1 |
PU.1 (Spi-1) |
 |
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| |
3.5.2.5.1.1 |
PU.1, isoform 1 |
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3.5.2.5.1.2 |
PU.1, isoform 2 |
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| |
3.5.2.5.2 |
Spi-B |
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3.5.2.5.2.1 |
Spi-B, isoform 1 |
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3.5.2.5.2.2 |
Spi-B, isoform 2 (ΔSpi-B) |
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3.5.2.5.2.3 |
Spi-B, isoform 3 |
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| |
3.5.2.5.3 |
Spi-C |
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| |
3.5.2.6 |
Subfamily: ETV6-like factors |
CCCGGAAGT |
|
| |
3.5.2.6.1 |
ETV6 (Tel-1) |
 |
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3.5.2.6.2 |
ETV7 (Tel-2) |
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3.5.2.6.2.1 |
ETV7, isoform A |
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3.5.2.6.2.2 |
ETV7, isoform B |
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3.5.2.6.2.3 |
ETV7, isoform C |
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3.5.2.6.2.4 |
ETV7, isoform D |
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3.5.2.6.2.5 |
ETV7, isoform E |
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3.5.2.6.2.6 |
ETV7, isoform F |
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3.5.2.6.2.7 |
ETV7, isoform G |
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3.5.2.6.2.8 |
ETV7, isoform H |
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3.5.2.7 |
Subfamily: SPDEF-like factors |
CCGGATGT |
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| |
3.5.2.7.1 |
SPDEF (PSE) |
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3.5.2.7.1.1 |
SPDEF, isoform 1 |
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3.5.2.7.1.2 |
SPDEF, isoform 2 |
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3.5.3 |
Family: Interferon-regulatory factors |
AAGTGAA |
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| |
3.5.3.0.1 |
IRF-1 |
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3.5.3.0.2 |
IRF-2 |
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3.5.3.0.2.1 |
IRF-2, isoform 1 |
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3.5.3.0.2.2 |
IRF-2s, isoform 2 |
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3.5.3.0.3 |
IRF-3 |
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3.5.3.0.3.1 |
IRF-3, isoform 1 |
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3.5.3.0.3.2 |
IRF-3e, isoform 2 |
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3.5.3.0.3.3 |
IRF-3a |
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3.5.3.0.3.4 |
IRF-3b, isoform 2 |
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3.5.3.0.3.5 |
IRF-3c, isoform 2 |
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3.5.3.0.4 |
IRF-4 (LSIRF, NF-EM5, MUM1, Pip) |
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3.5.3.0.4.1 |
IRF-4, isoform 1 |
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3.5.3.0.4.2 |
IRF-4, isoform 2 |
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3.5.3.0.5 |
IRF-5 |
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3.5.3.0.5.1 |
IRF-5, isoform 1 |
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3.5.3.0.5.2 |
IRF-5, isoform 2 |
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3.5.3.0.5.3 |
IRF-5, isoform 3 |
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3.5.3.0.5.4 |
IRF-5, isoform 4 |
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3.5.3.0.5.5 |
IRF-5, isoform 5 |
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3.5.3.0.5.6 |
IRF-5, isoform 6 |
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3.5.3.0.6 |
IRF-6 |
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3.5.3.0.6.1 |
IRF-6, isoform 1 |
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3.5.3.0.6.2 |
IRF-6, isoform 2 |
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3.5.3.0.7 |
IRF-7 |
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3.5.3.0.7.1 |
IRF-7, isoform A |
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3.5.3.0.7.2 |
IRF-7β, isoform B |
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3.5.3.0.7.3 |
IRF-7γ, isoform C |
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3.5.3.0.7.4 |
IRF-7H, isoform D |
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3.5.3.0.8 |
IRF-8 (ICSBP1) |
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3.5.3.0.9 |
IRF-9 (ISGF-3γ) |
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3.6 |
Class: TEA domain factors |
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| |
3.6.1 |
Family: TEF-1-related factors |
CATTCC |
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| |
3.6.1.0.1 |
TEF-1 (TEAD-1, TCF-13) |
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3.6.1.0.1.1 |
TEF-1, isoform 1 |
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3.6.1.0.1.2 |
TEF-1, isoform 2 |
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3.6.1.0.2 |
TEF-3 (TEAD-4, TCF-13L1) |
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3.6.1.0.2.1 |
TEF-3, isoform 1 |
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3.6.1.0.2.2 |
TEF-3, isoform 2 |
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3.6.1.0.2.3 |
TEF-3, isoform 3 |
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3.6.1.0.3 |
TEF-4 (TEAD-2) |
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3.6.1.0.3.1 |
TEF-4, isoform 1 |
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3.6.1.0.3.2 |
TEF-4, isoform 2 |
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3.6.1.0.3.3 |
TEF-4, isoform 3 |
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3.6.1.0.3.4 |
TEF-4, isoform 4 |
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3.6.1.0.4 |
TEF-5 (TEAD-3, TEAD5) |
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3.7 |
Class: ARID domain factors |
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| |
3.7.1 |
Family: ARID-related factors |
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| |
3.7.1.1 |
Subfamily: ARID1 |
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| |
3.7.1.1.1 |
ARID1A (BAF250, BAF250A, OSA1, SMARCF1) |
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3.7.1.1.1.1 |
ARID1A, isoform 1 |
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3.7.1.1.1.2 |
ARID1A, isoform 2 |
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3.7.1.1.1.3 |
ARID1A, isoform 3 |
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3.7.1.1.2 |
ARID1B (BAF250, BAF250A, OSA1, SMARCF1) |
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| |
3.7.1.1.2.1 |
ARID1B, isoform 1 |
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3.7.1.1.2.2 |
ARID1B, isoform 2 |
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3.7.1.1.2.3 |
ARID1B, isoform 3 |
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3.7.1.1.2.4 |
ARID1B, isoform 4 |
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| |
3.7.1.2 |
Subfamily: ARID2 |
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| |
3.7.1.2.1 |
ARID2 (BAF200) |
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| |
3.7.1.2.1.1 |
ARID2, isoform 1 |
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3.7.1.2.1.2 |
ARID2, isoform 2 |
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| |
3.7.1.3 |
Subfamily: ARID3 |
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| |
3.7.1.3.1 |
ARID3A (Bright, DRIL1, DRIL3, DRX, E2FBP1) |
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| |
3.7.1.3.2 |
ARID3B (BDP, DRIL2) |
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| |
3.7.1.3.2.1 |
ARID3B, isoform 1 |
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3.7.1.3.2.2 |
ARID3B, isoform 3 |
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| |
3.7.1.3.2.3 |
ARID3B, isoform 4 |
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| |
3.7.1.3.3 |
ARID3C |
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| |
3.7.1.4 |
Subfamily: ARID4 |
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| |
3.7.1.4.1 |
ARID4A (RBBP1, RBP1) |
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| |
3.7.1.4.1.1 |
ARID4A, isoform I |
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| |
3.7.1.4.1.2 |
ARID4A, isoform II |
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| |
3.7.1.4.1.3 |
ARID4A, isoform III |
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| |
3.7.1.4.2 |
ARID4B (BRCAA1, RBBP1L1, RBP1L1, SAP180) |
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| |
3.7.1.4.2.1 |
ARID4B, isoform 1 |
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| |
3.7.1.4.2.2 |
ARID4B, isoform 2 |
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| |
3.7.1.4.2.3 |
ARID4B, isoform 3 |
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| |
3.7.1.4.2.4 |
ARID4B, isoform 4 |
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| |
3.7.1.5 |
Subfamily: ARID5 |
|
|
| |
3.7.1.5.1 |
ARID5A (MRF1) |
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|
| |
3.7.1.5.1.1 |
ARID5A, isoform 1 |
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| |
3.7.1.5.1.2 |
ARID5A, isoform 2 |
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| |
3.7.1.5.2 |
ARID5B (DESRT, MRF2) |
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|
| |
3.7.1.5.2.1 |
ARID5B, isoform 1 |
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| |
3.7.1.5.2.2 |
ARID5B, isoform 2 |
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| |
3.7.1.5.2.3 |
ARID5B, isoform 3 |
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| |
3.7.1.6 |
Subfamily: JARID1 |
|
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| |
3.7.1.6.1 |
JARID1A (KDM5A, RBBP2, RBP2) |
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|
F |
|
| |
3.7.1.6.1.1 |
JARID1A, isoform 1 |
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| |
3.7.1.6.1.2 |
JARID1A, isoform 2 |
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| |
3.7.1.6.2 |
JARID1B (KDM5B, PLU1, RBBP2H1) |
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| |
3.7.1.6.2.1 |
JARID1B, isoform 1 |
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| |
3.7.1.6.2.2 |
JARID1B, isoform 2 |
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| |
3.7.1.6.3 |
JARID1C (KDM5C, DXS1272E, SMCX, XE169) |
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| |
3.7.1.6.3.1 |
JARID1C, isoform 1 |
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| |
3.7.1.6.3.2 |
JARID1C, isoform 2 |
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| |
3.7.1.6.3.3 |
JARID1C, isoform 3 |
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| |
3.7.1.6.3.4 |
JARID1C, isoform 4 |
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| |
3.7.1.6.3.5 |
JARID1C, isoform 5 |
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| |
3.7.1.6.4 |
JARID1D (KDM5D, HY, HYA, SMCY) |
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| |
3.7.1.6.4.1 |
JARID1D, isoform 1 |
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| |
3.7.1.6.4.2 |
JARID1D, isoform 2 |
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| |
3.7.1.6.4.3 |
JARID1D, isoform 3 |
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| |
3.7.1.7 |
Subfamily: JARID2 |
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| |
3.7.1.7.1 |
JARID2 (Jumonji, JMJ) |
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|
| |
3.7.1.7.1.1 |
JARID2, isoform 1 |
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| |
3.7.1.7.1.2 |
JARID2, isoform 2 |
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| |
3.7.1.7.1.3 |
JARID2, isoform 3 |
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| 4 |
Superclass: Other all-α-helical DNA-binding domains |
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|
| |
4.1 |
Class: High-mobility group (HMG) domain factors |
|
|
|
| |
4.1.1 |
Family: SOX-related factors |
ACAA |
|
| |
4.1.1.1 |
Subfamily: Group A |
AAACAAA |
|
| |
4.1.1.1.1 |
SRY (TDF) |
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| |
4.1.1.2 |
Subfamily: Group B |
AACAAAG |
|
| |
4.1.1.2.1 |
SOX-1 |
 |
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| |
4.1.1.2.2 |
SOX-2 |
 |
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| |
4.1.1.2.3 |
SOX-3 |
 |
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F |
|
| |
4.1.1.2.4 |
SOX-14 (SOX-28) |
 |
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| |
4.1.1.2.5 |
SOX-21 |
 |
|
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| |
4.1.1.3 |
Subfamily: Group C |
AACAAAGG |
|
| |
4.1.1.3.1 |
SOX-4 (IRE-ABP) |
 |
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| |
4.1.1.3.2 |
SOX-11 |
 |
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| |
4.1.1.3.3 |
SOX-12 (SOX-22) |
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| |
4.1.1.4 |
Subfamily: Group D |
AACAAT |
|
| |
4.1.1.4.1 |
SOX-5 |
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| |
4.1.1.4.1.1 |
SOX-5, isoform 1 (L-SOX-5A) |
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| |
4.1.1.4.1.2 |
SOX-5, isoform 2 (L-SOX-5B) |
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| |
4.1.1.4.1.3 |
SOX-5, isoform 3 |
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| |
4.1.1.4.1.4 |
SOX-5, isoform 4 |
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| |
4.1.1.4.1.5 |
SOX-5, isoform 5 |
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| |
4.1.1.4.2 |
SOX-6 |
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| |
4.1.1.4.2.1 |
SOX-6, isoform 1 |
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| |
4.1.1.4.2.2 |
SOX-6, isoform 2 |
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| |
4.1.1.4.2.3 |
SOX-6, isoform 3 |
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| |
4.1.1.4.2.4 |
SOX-6, isoform 4 |
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| |
4.1.1.4.3 |
SOX-13 |
|
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|
| |
4.1.1.5 |
Subfamily: Group E |
AAACAAAGG |
|
| |
4.1.1.5.1 |
SOX-8 |
 |
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| |
4.1.1.5.2 |
SOX-9 |
 |
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| |
4.1.1.5.3 |
SOX-10 |
 |
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|
| |
4.1.1.5.3.1 |
SOX-10, isoform 1 |
|
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| |
4.1.1.5.3.2 |
SOX-10, isoform 2 |
|
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|
| |
4.1.1.6 |
Subfamily: Group F |
AACAAT |
|
| |
4.1.1.6.1 |
SOX-7 |
 |
|
|
|
|
|
|
| |
4.1.1.6.1.1 |
SOX-7, isoform 1 |
|
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|
| |
4.1.1.6.1.2 |
SOX-7, isoform 2 |
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|
| |
4.1.1.6.2 |
SOX-17 |
 |
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| |
4.1.1.6.3 |
SOX-18 |
 |
|
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|
| |
4.1.1.7 |
Subfamily: Group G |
|
|
| |
4.1.1.7.1 |
SOX-15 |
 |
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|
| |
4.1.1.7.1.1 |
SOX-15, isoform 1 |
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|
| |
4.1.1.7.1.2 |
SOX-15, isoform 2 |
|
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|
|
| |
4.1.1.8 |
Subfamily: Group H |
GGACAATGG |
|
| |
4.1.1.8.1 |
SOX-30 |
|
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|
|
| |
4.1.1.8.1.1 |
SOX-30, isoform 1 |
|
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|
| |
4.1.1.8.1.2 |
SOX-30, isoform 2 |
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|
|
|
|
| |
4.1.1.9 |
Subfamily: Further Sox-related factors |
TTCATTCAA |
|
| |
4.1.1.9.1 |
CIC [1] |
|
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|
| |
4.1.1.9.2 |
HBP-1 [1] |
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|
| |
4.1.1.9.2.1 |
HBP-1, isoform 1 |
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| |
4.1.1.9.2.2 |
HBP-1, isoform 2 |
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|
| |
4.1.1.9.2.3 |
HBP-1, isoform 3 |
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|
| |
4.1.1.9.3 |
BBX (HBP-2) [1] |
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|
| |
4.1.1.9.3.1 |
BBX, isoform 1 |
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| |
4.1.1.9.3.2 |
BBX, isoform 2 |
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|
| |
4.1.1.9.3.3 |
BBX, isoform 3 |
|
|
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|
| |
4.1.2 |
Family: TOX-related factors |
|
|
| |
4.1.2.0.1 |
TOX [1] |
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| |
4.1.2.0.2 |
TOX-2 (GCX-1) [1] |
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|
| |
4.1.2.0.2.1 |
TOX-2, isoform 1 |
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| |
4.1.2.0.2.2 |
TOX-2, isoform 2 |
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| |
4.1.2.0.2.3 |
TOX-2, isoform 3 |
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| |
4.1.2.0.2.4 |
TOX-2, isoform 4 |
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|
| |
4.1.2.0.3 |
TOX-3 (CAGF9) [1] |
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| |
4.1.2.0.3.1 |
TOX-3, isoform 1 |
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| |
4.1.2.0.3.2 |
TOX-3, isoform 2 |
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| |
4.1.2.0.4 |
TOX-4 (LCP-1) [1] |
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| |
4.1.2.0.4.1 |
TOX-4, isoform 1 |
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| |
4.1.2.0.4.2 |
TOX-4, isoform 2 |
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| |
4.1.2.0.4.3 |
TOX-4, isoform 3 |
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| |
4.1.2.0.5 |
SMARCE1 [1] |
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|
| |
4.1.2.0.5.1 |
SMARCE1, isoform 1 (BAF57) |
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| |
4.1.2.0.5.2 |
SMARCE1, isoform 2 (BAF57v) |
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| |
4.1.2.0.5.3 |
SMARCE1, isoform 3 |
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| |
4.1.2.0.5.4 |
SMARCE1, isoform 4 |
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| |
4.1.2.0.5.5 |
SMARCE1, isoform 5 |
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| |
4.1.2.0.5.6 |
SMARCE1, isoform 6 |
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| |
4.1.2.0.6 |
HMG20A (HMGX1) [1] |
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|
| |
4.1.2.0.6.1 |
HMG20A, isoform 1 |
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|
| |
4.1.2.0.6.2 |
HMG20A, isoform 2 |
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|
| |
4.1.2.0.7 |
HMG20B (HMGX2) [1] |
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|
| |
4.1.2.0.7.1 |
HMG20B, isoform 1 |
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|
| |
4.1.2.0.7.2 |
HMG20B, isoform 2 |
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| |
4.1.2.0.7.3 |
HMG20B, isoform 3 |
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|
| |
4.1.2.0.8 |
HMGXB3 (SMF) [1] |
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|
| |
4.1.2.0.8.1 |
HMGXB3, isoform 1 |
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| |
4.1.2.0.8.2 |
HMGXB3, isoform 2 |
|
|
|
|
|
| |
4.1.3 |
Family: TCF-7-related factors |
TTCAAAG |
|
| |
4.1.3.0.1 |
TCF-7 (TCF-1) [1] |
 |
|
|
|
|
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|
| |
4.1.3.0.1.1 |
TCF-7, isoform 1L |
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|
| |
4.1.3.0.1.2 |
TCF-7, isoform 1S |
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|
| |
4.1.3.0.1.3 |
TCF-7, isoform 2L |
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|
| |
4.1.3.0.1.4 |
TCF-7, isoform 2S |
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|
| |
4.1.3.0.1.5 |
TCF-7, isoform 3L |
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|
| |
4.1.3.0.1.6 |
TCF-7, isoform 3S (TCF-1C) |
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|
| |
4.1.3.0.1.7 |
TCF-7, isoform 4L |
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|
| |
4.1.3.0.1.8 |
TCF-7, isoform 4S (TCF-1A) |
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|
| |
4.1.3.0.1.9 |
TCF-7, isoform 5L |
|
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|
| |
4.1.3.0.1.10 |
TCF-7, isoform 5S (TCF-1D) |
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|
| |
4.1.3.0.1.11 |
TCF-7, isoform 6L |
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| |
4.1.3.0.1.12 |
TCF-7, isoform 6S |
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| |
4.1.3.0.1.13 |
TCF-7, isoform 7L |
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| |
4.1.3.0.1.14 |
TCF-7, isoform 7S (TCF-1F) |
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|
| |
4.1.3.0.1.15 |
TCF-7, isoform 8L |
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|
| |
4.1.3.0.1.16 |
TCF-7, isoform 8S |
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| |
4.1.3.0.2 |
TCF-7L1 (TCF-3) [1] |
 |
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| |
4.1.3.0.3 |
TCF-7L2 (TCF-4) [1] |
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|
F |
|
| |
4.1.3.0.3.1 |
TCF-7L2, isoform 1 (TCF-4M) |
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| |
4.1.3.0.3.2 |
TCF-7L2, isoform 2 |
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| |
4.1.3.0.3.3 |
TCF-7L2, isoform 3 |
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| |
4.1.3.0.3.4 |
TCF-7L2, isoform 4 |
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| |
4.1.3.0.3.5 |
TCF-7L2, isoform 5 |
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|
| |
4.1.3.0.3.6 |
TCF-7L2, isoform 6 (TCF-4I) |
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| |
4.1.3.0.3.7 |
TCF-7L2, isoform 7 |
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| |
4.1.3.0.3.8 |
TCF-7L2, isoform 8 |
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|
| |
4.1.3.0.3.9 |
TCF-7L2, isoform 9 (TCF-4G) |
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| |
4.1.3.0.3.10 |
TCF-7L2, isoform 10 |
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| |
4.1.3.0.3.11 |
TCF-7L2, isoform 11 |
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|
| |
4.1.3.0.3.12 |
TCF-7L2, isoform 12 |
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|
| |
4.1.3.0.3.13 |
TCF-7L2, isoform 13 (TCF-4J) |
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|
| |
4.1.3.0.3.14 |
TCF-7L2, isoform 14 (TCF-4B) |
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|
| |
4.1.3.0.3.15 |
TCF-7L2, isoform 15 (TCF-4A) |
|
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|
| |
4.1.3.0.3.16 |
TCF-7L2, isoform 16 (TCF-4K) |
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|
| |
4.1.3.0.3.17 |
TCF-7L2, isoform 17 (TCF-4X2) |
|
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|
| |
4.1.3.0.4 |
LEF-1 (TCF-1α) [1] |
|
|
|
|
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|
| |
4.1.3.0.4.1 |
LEF-1, isoform 1 (LEF-1A) |
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|
| |
4.1.3.0.4.2 |
LEF-1, isoform 2 (LEF-1B) |
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|
| |
4.1.3.0.4.3 |
LEF-1, isoform 3 (LEF-1-DN) |
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|
| |
4.1.3.0.4.4 |
LEF-1, isoform 4 |
|
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|
| |
4.1.3.0.4.5 |
LEF-1, isoform 5 |
|
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|
| |
4.1.3.0.4.6 |
LEF-1, isoform 6 |
|
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|
| |
4.1.3.0.4.7 |
LEF-1, isoform 7 |
|
|
|
|
|
| |
4.1.3.0.5 |
TAF-1 (TAF-2A, TAF(II)250) [1] |
|
|
|
|
|
|
|
| |
4.1.3.0.5.1 |
TAF-1, isoform 1 |
|
|
|
|
|
| |
4.1.3.0.5.2 |
TAF-1, isoform 2 |
|
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|
| |
4.1.3.0.5.3 |
TAF-1, isoform 3 |
|
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|
| |
4.1.3.0.5.4 |
TAF-1, isoform 4 |
|
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|
|
| |
4.1.3.0.5.5 |
TAF-1, isoform 2a |
|
|
|
|
|
| |
4.1.3.0.5.6 |
TAF-1, isoform 2c |
|
|
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|
| |
4.1.3.0.5.7 |
TAF-1, isoform 2d |
|
|
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|
| |
4.1.3.0.5.8 |
TAF-1, isoform 2e (2F) |
|
|
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|
| |
4.1.3.0.5.9 |
TAF-1, isoform 2g |
|
|
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|
| |
4.1.3.0.5.10 |
TAF-1, isoform 2h |
|
|
|
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|
| |
4.1.3.0.5.11 |
TAF-1, isoform 2i |
|
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|
| |
4.1.3.0.5.12 |
N-TAF-1 (TA14-391) |
|
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|
| |
4.1.3.0.5.13 |
TAF-1, isoform TAF250-Δ |
|
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|
| |
4.1.3.0.6 |
TAF-1L (TAF(II)210) [1] |
|
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|
| |
4.1.4 |
Family: PBRM1-related factors |
|
|
| |
4.1.4.0.1 |
PB-1 (PBRM1, BAF180) [1] |
|
|
|
|
|
|
|
| |
4.1.4.0.1.1 |
PB-1, isoform 1 |
|
|
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|
| |
4.1.4.0.1.2 |
PB-1, isoform 2 |
|
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|
|
| |
4.1.4.0.1.3 |
PB-1, isoform 3 |
|
|
|
|
|
| |
4.1.4.0.1.4 |
PB-1, isoform 4 |
|
|
|
|
|
| |
4.1.4.0.1.5 |
PB-1, isoform 5 |
|
|
|
|
|
| |
4.1.4.0.1.6 |
PB-1, isoform 6 |
|
|
|
|
|
| |
4.1.4.0.1.7 |
PB-1, isoform 7 |
|
|
|
|
|
| |
4.1.4.0.1.8 |
PB-1, isoform 8 |
|
|
|
|
|
| |
4.1.4.0.1.9 |
PB-1, isoform 9 |
|
|
|
|
|
| |
4.1.4.0.2 |
HMGXB4 (HMG2L1) [1] |
|
|
|
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|
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|
| |
4.1.5 |
Family: WHSC1-related factors |
GGCATTGGAAA |
|
| |
4.1.5.0.1 |
WHSC1 (TRX-5, NSD2) [1] |
|
|
|
|
|
|
|
| |
4.1.5.0.1.1 |
WHSC1, isoform 1 |
|
|
|
|
|
| |
4.1.5.0.1.2 |
WHSC1, isoform 2 |
|
|
|
|
|
| |
4.1.5.0.1.3 |
WHSC1, isoform 3 |
|
|
|
|
|
| |
4.1.5.0.1.4 |
WHSC1, isoform 4 |
|
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|
|
|
| |
4.1.5.0.1.5 |
WHSC1, isoform 5 |
|
|
|
|
|
| |
4.1.5.0.1.6 |
WHSC1, isoform 6 |
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|
|
|
| |
4.1.5.0.1.7 |
WHSC1, isoform 7 |
|
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|
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|
| |
4.1.5.0.2 |
SSRP1 [1] |
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|
| |
4.1.6 |
Family: UBF-related factors |
|
|
| |
4.1.6.1 |
Subfamily: UBF-related factors |
|
|
| |
4.1.6.1.1 |
UBF [6] |
|
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|
| |
4.1.6.1.1.1 |
UBF1, isoform Long |
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|
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| |
4.1.6.1.1.2 |
UBF2, isoform Short |
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|
| |
4.1.6.2 |
Subfamily: UBF-like proteins |
|
|
| |
4.1.6.2.1 |
UBTFL1 [2] |
|
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| |
4.1.6.2.2 |
UBTFL6 [2] |
|
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|
| |
4.1.7 |
Family: TFAM |
|
|
| |
4.1.7.0.1 |
TFAM (mtTFA, MtTF1, TCF6, TCF6L2) [2] |
|
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|
|
|
|
| |
4.1.7.0.1.1 |
TFAM, isoform 1 |
|
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|
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|
| |
4.1.7.0.1.2 |
TFAM, isoform 2 |
|
|
|
|
|
| |
4.2 |
Class: Heteromeric CCAAT-binding factors |
|
|
| |
4.2.1 |
Family: Heteromeric CCAAT-binding factors |
CCAAT |
|
| |
4.2.1.0.1 |
NF-YA (CP1A, CBF-B) |
|
|
|
|
|
|
|
| |
4.2.1.0.1.1 |
NF-YA, isoform 1 |
|
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|
|
| |
4.2.1.0.1.2 |
NF-YA, isoform 2 |
|
|
|
|
|
| |
4.2.1.0.2 |
NF-YB (CP1B, CBF-A) |
|
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|
|
|
|
| |
4.2.1.0.3 |
NF-YC |
|
|
|
|
|
|
|
| |
4.2.1.0.3.1 |
NF-YC, isoform 1 |
|
|
|
|
|
| |
4.2.1.0.3.2 |
NF-YC, isoform 2 |
|
|
|
|
|
| |
4.2.1.0.3.3 |
NF-YC, isoform 3 |
|
|
|
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|
| |
4.2.1.0.3.4 |
NF-YC, isoform 4 |
|
|
|
|
|
| |
4.2.1.0.3.5 |
NF-YC, isoform 5 |
|
|
|
|
|
| |
4.2.1.0.3.6 |
NF-YC, isoform 6 |
|
|
|
|
|
| |
4.2.1.0.3.7 |
NF-YC, isoform 7 |
|
|
|
|
|
|
| 5 |
Superclass: α-Helices exposed by β-structures |
|
|
| |
5.1 |
Class: MADS box factors |
|
|
|
| |
5.1.1 |
Family: Regulators of differentiation |
CTAAAAATAG |
|
| |
5.1.1.1 |
Subfamily: MEF-2 |
CTAAAAATAG |
|
| |
5.1.1.1.1 |
MEF-2A |
 |
|
|
|
|
|
|
| |
5.1.1.1.1.1 |
MEF-2A, isoform 1 (MEF2) |
|
|
|
|
|
| |
5.1.1.1.1.2 |
MEF-2A, isoform 2 (aMEF2) |
|
|
|
|
|
| |
5.1.1.1.1.3 |
MEF-2A, isoform 3 (RSRFC4) |
|
|
|
|
|
| |
5.1.1.1.1.4 |
MEF-2A, isoform 4 (RSRFC9) |
|
|
|
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|
| |
5.1.1.1.1.5 |
MEF-2A, isoform 5 |
|
|
|
|
|
| |
5.1.1.1.1.6 |
MEF-2A, isoform 6 |
|
|
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|
| |
5.1.1.1.1.7 |
MEF-2A, isoform 7 |
|
|
|
|
|
| |
5.1.1.1.1.8 |
MEF-2A, isoform 8 |
|
|
|
|
|
| |
5.1.1.1.2 |
MEF-2B (RSRFR2, xMEF2) |
 |
|
|
|
|
|
|
| |
5.1.1.1.2.1 |
MEF-2B, isoform 1 |
|
|
|
|
|
| |
5.1.1.1.2.2 |
MEF-2B, isoform 2 |
|
|
|
|
|
| |
5.1.1.1.3 |
MEF-2C |
|
|
|
|
|
|
|
| |
5.1.1.1.3.1 |
MEF-2C, isoform 1 |
|
|
|
|
|
| |
5.1.1.1.3.2 |
MEF-2C, isoform 2 (MEF-2CΔ8) |
|
|
|
|
|
| |
5.1.1.1.3.3 |
MEF-2C, isoform 3 (MEF-2CΔ32) |
|
|
|
|
|
| |
5.1.1.1.3.4 |
MEF-2C, isoform 4 |
|
|
|
|
|
| |
5.1.1.1.3.5 |
MEF-2C, isoform 5 |
|
|
|
|
|
| |
5.1.1.1.3.6 |
MEF-2C, isoform 6 |
|
|
|
|
|
| |
5.1.1.1.3.7 |
MEF-2C, isoform MEF-2CΔ8,32 |
|
|
|
|
|
| |
5.1.1.1.4 |
MEF-2D |
 |
|
|
|
|
|
|
| |
5.1.1.1.4.1 |
MEF-2D, isoform MEF2DAB |
|
|
|
|
|
| |
5.1.1.1.4.2 |
MEF-2D, isoform MEF2DA'B |
|
|
|
|
|
| |
5.1.1.1.4.3 |
MEF-2D, isoform MEF2D0B |
|
|
|
|
|
| |
5.1.1.1.4.4 |
MEF-2D, isoform MEF2DA0 |
|
|
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|
|
| |
5.1.1.1.4.5 |
MEF-2D, isoform MEF2DA'0 |
|
|
|
|
|
| |
5.1.1.1.4.6 |
MEF-2D, isoform MEF2D00 |
|
|
|
|
|
| |
5.1.2 |
Family: Responders to external signals (SRF/RLM1) |
CCATATATGG |
|
| |
5.1.2.0.1 |
SRF |
 |
|
|
|
|
|
|
| |
5.2 |
Class: E2-related factors |
|
| |
5.2.1 |
Family: E2 |
|
|
| |
5.3 |
Class: SAND domain factors |
|
|
|
| |
5.3.1 |
Family: AIRE |
ATTGGTTATATTGGTTA |
|
| |
5.3.1.0.1 |
AIRE |
|
|
|
|
|
|
|
| |
5.3.1.0.1.1 |
AIRE-1, isoform 1 |
|
|
|
|
|
| |
5.3.1.0.1.2 |
AIRE-2, isoform 2 |
|
|
|
|
|
| |
5.3.1.0.1.3 |
AIRE-3, isoform 3 |
|
|
|
|
|
| |
5.3.1.0.1.4 |
AIRE, isoform 4 |
|
|
|
|
|
| |
5.3.2 |
Family: DEAF |
TTTCCG |
|
| |
5.3.2.0.1 |
DEAF1 |
|
|
|
|
|
|
|
| |
5.3.2.0.1.1 |
Hu-DF1, isoform 1 |
|
|
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|
|
| |
5.3.2.0.1.2 |
NUDR8, isoform 2 |
|
|
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|
| |
5.3.2.0.1.3 |
Suppressin, isoform 3 |
|
|
|
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|
| |
5.3.2.0.1.4 |
Hu-DF1-VAR, isoform 4 |
|
|
|
|
|
| |
5.3.3 |
Family: GMEB |
CTTCTGTATGAGCGCCAGTAT |
|
| |
5.3.3.1 |
Subfamily: GMEB |
|
|
| |
5.3.3.1.1 |
GMEB-1 |
|
|
|
|
|
|
|
| |
5.3.3.1.1.1 |
GMEB-1, isoform 1 |
|
|
|
|
|
| |
5.3.3.1.1.2 |
GMEB-1, isoform 2 |
|
|
|
|
|
| |
5.3.3.1.2 |
GMEB-2 |
 |
|
|
|
|
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|
| |
5.3.4 |
Family: Sp110 |
|
|
| |
5.3.4.0.1 |
Sp110 |
|
|
|
|
|
|
|
| |
5.3.4.0.1.1 |
Sp110, isoform 1 |
|
|
|
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|
| |
5.3.4.0.1.2 |
Sp110, isoform 2 (IFI75) |
|
|
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|
| |
5.3.4.0.1.3 |
Sp110, isoform 3 (Sp110b) |
|
|
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|
| |
5.3.4.0.1.4 |
Sp110, isoform 4 (IFI41) |
|
|
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|
| |
5.3.4.0.1.5 |
Sp110, isoform 5 |
|
|
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|
| |
5.3.4.0.1.6 |
Sp110, isoform 6 |
|
|
|
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|
| |
5.3.4.0.1.7 |
Sp110, isoform 7 |
|
|
|
|
|
| |
5.3.5 |
Family: Sp140/Sp100 |
|
|
| |
5.3.5.1 |
Subfamily: Sp140-like factors |
|
|
| |
5.3.5.1.1 |
Sp140 |
|
|
|
|
|
|
|
| |
5.3.5.1.1.1 |
Sp140, isoform LYSp140-A |
|
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|
| |
5.3.5.1.1.2 |
Sp140, isoform LYSp140-B |
|
|
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|
| |
5.3.5.1.1.3 |
Sp140, isoform 3 |
|
|
|
|
|
| |
5.3.5.1.1.4 |
Sp140, isoform 4 |
|
|
|
|
|
| |
5.3.5.1.1.5 |
Sp140, isoform 5 |
|
|
|
|
|
| |
5.3.5.1.1.6 |
Sp140, isoform 6 |
|
|
|
|
|
| |
5.3.5.1.2 |
Sp140L |
|
|
|
|
|
|
|
| |
5.3.5.1.2.1 |
Sp140L, isoform 1 |
|
|
|
|
|
| |
5.3.5.1.2.2 |
Sp140L, isoform 2 |
|
|
|
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|
| |
5.3.5.1.2.3 |
Sp140L, isoform 3 |
|
|
|
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|
| |
5.3.5.1.2.4 |
Sp140L, isoform 4 |
|
|
|
|
|
| |
5.3.5.2 |
Subfamily: Sp100 |
|
|
| |
5.3.5.2.1 |
Sp100 |
|
|
|
|
|
|
|
| |
5.3.5.2.1.1 |
Sp100-HMG |
|
|
|
|
|
| |
5.3.5.2.1.2 |
Sp100-A |
|
|
|
|
|
| |
5.3.5.2.1.3 |
Sp100-B |
|
|
|
|
|
| |
5.3.5.2.1.4 |
Sp100-C |
|
|
|
|
|
| |
5.3.5.2.1.5 |
SpAlt-C |
|
|
|
|
|
| |
5.3.5.2.1.6 |
Sp100, isoform 6 |
|
|
|
|
|
| |
5.3.5.2.1.7 |
Sp100, isoform 7 |
|
|
|
|
|
|
| 6 |
Superclass: Immunoglobulin fold |
|
|
| |
6.1 |
Class: Rel homology region (RHR) factors |
|
|
|
| |
6.1.1 |
Family: NF-kappaB-related factors |
|
|
| |
6.1.1.1 |
Subfamily: NF-kappaB p50 subunit-like factors |
GGGAATTTCC |
|
| |
6.1.1.1.1 |
NF-κB p105 (NFKB1) |
 |
|
|
|
|
|
|
| |
6.1.1.1.1.1 |
NF-κB p105, isoform 1 |
|
|
|
|
|
| |
6.1.1.1.1.2 |
NF-κB p50, isoform 1 |
|
|
|
|
|
| |
6.1.1.1.1.3 |
NF-κB p105, isoform 2 |
|
|
|
|
|
| |
6.1.1.1.1.4 |
NF-κB p50, isoform 2 |
|
|
|
|
|
| |
6.1.1.1.1.5 |
NF-κB p105, isoform 3 |
|
|
|
|
|
| |
6.1.1.1.2 |
NF-κB p100 (NFKB2) |
 |
|
|
|
|
|
|
| |
6.1.1.1.2.1 |
NF-κB p100, isoform 1 |
|
|
|
|
|
| |
6.1.1.1.2.2 |
NF-κB p52, isoform 1 |
|
|
|
|
|
| |
6.1.1.1.2.3 |
NF-κB p49, isoform 3 |
|
|
|
|
|
| |
6.1.1.1.2.4 |
NF-κB p100, isoform 4 |
|
|
|
|
|
| |
6.1.1.2 |
Subfamily: NF-kappaB p65 subunit-like factors |
GAAAATTTCC |
|
| |
6.1.1.2.1 |
NF-κB p65 (RelA) |
|
|
|
|
|
|
|
| |
6.1.1.2.1.1 |
NF-κB p65, isoform 1 |
|
|
|
|
|
| |
6.1.1.2.1.2 |
NF-κB p65Δ, isoform 3 |
|
|
|
|
|
| |
6.1.1.2.1.3 |
NF-κB p65Δ2, isoform 2 |
|
|
|
|
|
| |
6.1.1.2.1.4 |
NF-κB p65, isoform 4 |
|
|
|
|
|
| |
6.1.1.2.2 |
RelB (I-Rel) |
|
|
|
|
|
|
|
| |
6.1.1.2.3 |
c-Rel |
|
|
|
|
|
|
|
| |
6.1.1.2.3.1 |
c-Rel, isoform 1 |
|
|
|
|
|
| |
6.1.1.2.3.2 |
c-Rel, isoform 2 |
|
|
|
|
|
| |
6.1.2 |
Family: Ankyrin domain-only factors |
|
|
| |
6.1.2.1 |
Subfamily: IκB-related factors |
|
|
| |
6.1.2.1.1 |
IκBα |
|
|
|
|
|
|
|
| |
6.1.2.1.2 |
IκBβ |
|
|
|
|
|
|
|
| |
6.1.2.1.2.1 |
IκBβ, isoform 1 |
|
|
|
|
|
| |
6.1.2.1.2.2 |
IκBβ, isoform 2 |
|
|
|
|
|
| |
6.1.2.1.3 |
IκBδ |
|
|
|
|
|
|
|
| |
6.1.2.1.3.1 |
IκBδ, isoform 1 |
|
|
|
|
|
| |
6.1.2.1.3.2 |
IκBδ, isoform 2 |
|
|
|
|
|
| |
6.1.2.1.3.3 |
IκBδ, isoform 3 |
|
|
|
|
|
| |
6.1.2.1.4 |
IκBε |
|
|
|
|
|
|
|
| |
6.1.2.1.5 |
IκBζ (MAIL) |
|
|
|
|
|
|
|
| |
6.1.2.1.5.1 |
MAIL-L, isoform 1 |
|
|
|
|
|
| |
6.1.2.1.5.2 |
MAIL-S, isoform 2 |
|
|
|
|
|
| |
6.1.2.1.5.3 |
IκBζ, isoform 3 |
|
|
|
|
|
| |
6.1.2.1.6 |
IκBR (TONSL) |
|
|
|
|
|
|
|
| |
6.1.2.1.6.1 |
IκBR, isoform 1 |
|
|
|
|
|
| |
6.1.2.1.6.2 |
IκBR, isoform 2 |
|
|
|
|
|
| |
6.1.2.1.7 |
IκBL |
|
|
|
|
|
|
|
| |
6.1.2.1.7.1 |
IκBL, isoform 1 |
|
|
|
|
|
| |
6.1.2.1.7.2 |
IκBL, isoform 2 |
|
|
|
|
|
| |
6.1.2.1.7.3 |
IκBL, isoform 3 |
|
|
|
|
|
| |
6.1.2.1.8 |
BCL-3 |
|
|
|
|
|
|
|
| |
6.1.2.2 |
Subfamily: RelA-associated inhibitor |
|
|
| |
6.1.2.2.1 |
RAI (iASPP) |
|
|
|
|
|
|
|
| |
6.1.3 |
Family: NFAT-related factors |
ATGGAAA |
|
| |
6.1.3.0.1 |
NFATc1 |
 |
|
|
|
|
|
|
| |
6.1.3.0.1.1 |
NFATc1, isoform Aα |
|
|
|
|
|
| |
6.1.3.0.1.2 |
NFATc1, isoform Aα' |
|
|
|
|
|
| |
6.1.3.0.1.3 |
NFATc1, isoform Aβ |
|
|
|
|
|
| |
6.1.3.0.1.4 |
NFATc1, isoform Bα |
|
|
|
|
|
| |
6.1.3.0.1.6 |
NFATc1, isoform Bβ |
|
|
|
|
|
| |
6.1.3.0.1.7 |
NFATc1, isoform Cα |
|
|
|
|
|
| |
6.1.3.0.1.9 |
NFATc1, isoform Cβ |
|
|
|
|
|
| |
6.1.3.0.1.10 |
NFATc1, isoform IAδIX |
|
|
|
|
|
| |
6.1.3.0.1.11 |
NFATc1, isoform IBδIX |
|
|
|
|
|
| |
6.1.3.0.1.12 |
NFATc1, isoform 10 |
|
|
|
|
|
| |
6.1.3.0.2 |
NFATc2 (NFATp, NFAT1) |
|
|
|
|
|
|
|
| |
6.1.3.0.2.1 |
NFATc2, isoform 1 (C; NFATc2_IB_IIL) |
|
|
|
|
|
| |
6.1.3.0.2.2 |
NFATc2, isoform 2 (B) |
|
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|
| |
6.1.3.0.2.3 |
NFATc2, isoform 3 (NFATc2_IA_IIL) |
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|
| |
6.1.3.0.2.4 |
NFATc2, isoform 4 |
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|
| |
6.1.3.0.2.5 |
NFATc2, isoform 5 |
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|
| |
6.1.3.0.3 |
NFATc3 (NFATx) |
|
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|
| |
6.1.3.0.3.1 |
NFATc3, isoform 1 (NFATx1) |
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|
| |
6.1.3.0.3.2 |
NFATc3, isoform 2 (NFATx2) |
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|
| |
6.1.3.0.3.3 |
NFATc3, isoform 3 (NFATx3) |
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|
| |
6.1.3.0.3.4 |
NFATc3, isoform 4 (NFATx4) |
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| |
6.1.3.0.3.5 |
NFATc3, isoform 5 (NFATa) |
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|
| |
6.1.3.0.3.6 |
NFATc3, isoform 6 (NFATb) |
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|
| |
6.1.3.0.4 |
NFATc4 (NFAT3) |
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|
| |
6.1.3.0.4.1 |
NFAT ID-IXL, isoform 1 |
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|
| |
6.1.3.0.4.2 |
NFAT IA-IXL, isoform 2 |
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|
| |
6.1.3.0.4.3 |
NFAT IA-IXi, isoform 3 |
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| |
6.1.3.0.4.4 |
NFAT IC-IXL, isoform 4 |
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|
| |
6.1.3.0.4.5 |
NFAT IC-IXi, isoform 5 |
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| |
6.1.3.0.4.6 |
NFAT IB-IXL, isoform 6 |
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| |
6.1.3.0.4.7 |
NFAT IB-IXi, isoform 7 |
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| |
6.1.3.0.4.8 |
NFAT ID-IXi, isoform 8 |
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| |
6.1.3.0.4.9 |
NFAT IE-IXL, isoform 9 |
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|
| |
6.1.3.0.4.10 |
NFAT IE-IXi, isoform 10 |
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|
| |
6.1.3.0.4.11 |
NFAT IA-IXS, isoform 11 |
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|
| |
6.1.3.0.4.12 |
NFAT IEi-IXL, isoform 12 |
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|
| |
6.1.3.0.4.13 |
NFAT IEi-IXi, isoform 13 |
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|
| |
6.1.3.0.4.14 |
NFAT IC-IXS, isoform 14 |
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| |
6.1.3.0.4.15 |
NFAT IB-IXS, isoform 15 |
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|
| |
6.1.3.0.4.16 |
NFAT ID-IXS, isoform 16 |
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| |
6.1.3.0.4.17 |
NFAT IE-IXS, isoform 17 |
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|
| |
6.1.3.0.4.18 |
NFAT IEi-IXS, isoform 18 |
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|
| |
6.1.3.0.4.19 |
NFAT IV-IXL, isoform 19 |
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|
| |
6.1.3.0.4.20 |
NFAT IV-IXi, isoform 20 |
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|
| |
6.1.3.0.4.21 |
NFAT IV-IXS, isoform 21 |
|
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| |
6.1.3.0.4.22 |
NFAT VI-IXL, isoform 22 |
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|
| |
6.1.3.0.4.23 |
NFAT VI-IXi, isoform 23 |
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| |
6.1.3.0.4.24 |
NFAT VI-IXS, isoform 24 |
|
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|
| |
6.1.3.0.5 |
NFAT5 (TonEBP) |
 |
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|
| |
6.1.3.0.5.1 |
NFAT5, isoform A |
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|
| |
6.1.3.0.5.2 |
NFAT5, isoform B |
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| |
6.1.3.0.5.3 |
NFAT5, isoform C |
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| |
6.1.3.0.5.4 |
NFAT5, isoform D |
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|
| |
6.1.3.0.5.5 |
NFAT5, isoform E |
|
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|
| |
6.1.4 |
Family: CSL-related factors |
CGTGGGAA |
|
| |
6.1.4.1 |
Subfamily: M |
CGTGGGAA |
|
| |
6.1.4.1.1 |
RBP-Jκ |
|
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|
|
F |
|
| |
6.1.4.1.1.1 |
RBP-Jκ, isoform APCR-2 |
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| |
6.1.4.1.1.2 |
RBP-Jκ, isoform APCR-1 |
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| |
6.1.4.1.1.3 |
RBP-Jκ, isoform APCR-3 |
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| |
6.1.4.1.1.4 |
RBP-Jκ, isoform 4 |
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| |
6.1.4.1.1.5 |
RBP-Jκ, isoform 5 |
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| |
6.1.4.1.1.6 |
RBP-Jκ, isoform 6 |
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|
| |
6.1.4.1.1.7 |
RBP-Jκ, isoform 7 |
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|
| |
6.1.4.1.2 |
RBP-JL |
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|
| |
6.1.4.1.2.1 |
RBP-JL, isoform 1 |
|
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| |
6.1.4.1.2.2 |
RBP-JL, isoform 2 |
|
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|
| |
6.1.5 |
Family: Early B-Cell Factor-related factors |
TCCCTAGGGA |
|
| |
6.1.5.0.1 |
EBF1 (COE1) |
 |
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|
| |
6.1.5.0.1.1 |
EBF1, isoform 1 |
|
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|
| |
6.1.5.0.1.2 |
EBF1, isoform 2 |
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|
| |
6.1.5.0.2 |
EBF2 (COE2) |
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|
| |
6.1.5.0.2.1 |
EBF2, isoform 1 |
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|
| |
6.1.5.0.2.2 |
EBF2, isoform 2 |
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|
| |
6.1.5.0.3 |
EBF3 (COE3) |
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|
| |
6.1.5.0.3.1 |
EBF3, isoform long |
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|
| |
6.1.5.0.3.2 |
EBF3, isoform short |
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|
| |
6.1.5.0.4 |
EBF4 (COE4) |
|
|
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|
|
F |
|
| |
6.1.5.0.4.1 |
EBF4, isoform long |
|
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|
| |
6.1.5.0.4.2 |
EBF4, isoform short |
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|
| |
6.2 |
Class: STAT domain factors |
|
|
|
| |
6.2.1 |
Family: STAT factors |
TTCCCGGAA |
|
| |
6.2.1.0.1 |
STAT1 |
|
|
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|
| |
6.2.1.0.1.1 |
p91, isoform α |
|
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|
| |
6.2.1.0.1.2 |
p84, isoform β |
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|
| |
6.2.1.0.2 |
STAT2 |
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|
| |
6.2.1.0.2.1 |
STAT2, isoform 1 |
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|
| |
6.2.1.0.2.2 |
STAT2, isoform 2 |
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|
| |
6.2.1.0.3 |
STAT3 |
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|
| |
6.2.1.0.3.1 |
STAT3, isoform 1 |
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|
| |
6.2.1.0.3.2 |
STAT3, isoform Del-701 |
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|
| |
6.2.1.0.3.3 |
STAT3, isoform 3 |
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|
| |
6.2.1.0.4 |
STAT4 |
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| |
6.2.1.0.5 |
STAT5A |
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|
| |
6.2.1.0.5.1 |
STAT5A, isoform 1 |
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|
| |
6.2.1.0.5.2 |
STAT5A, isoform 2 |
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|
| |
6.2.1.0.6 |
STAT5B |
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|
| |
6.2.1.0.7 |
STAT6 |
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|
| |
6.2.1.0.7.1 |
STAT6, isoform 1 |
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| |
6.2.1.0.7.2 |
STAT6, isoform 2 |
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|
| |
6.2.1.0.7.3 |
STAT6, isoform 3 |
|
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|
| |
6.3 |
Class: p53 domain factors |
|
|
|
| |
6.3.1 |
Family: p53-related factors |
GGACATGCCCGGGCATGTCC |
|
| |
6.3.1.0.1 |
p53 |
 |
|
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|
| |
6.3.1.0.1.1 |
p53, isoform 1 (p53α) |
|
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|
| |
6.3.1.0.1.2 |
p53, isoform 2 (p53β, I9RET) |
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|
| |
6.3.1.0.1.3 |
p53, isoform 3 (p53γ) |
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|
| |
6.3.1.0.1.4 |
p53, isoform 4 (Δ40-p53α) |
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|
| |
6.3.1.0.1.5 |
p53, isoform 5 (Δ40-p53β) |
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|
| |
6.3.1.0.1.6 |
p53, isoform 6 (Δ40-p53γ) |
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|
| |
6.3.1.0.1.7 |
p53, isoform 7 (Δ133-p53α) |
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|
| |
6.3.1.0.1.8 |
p53, isoform 8 (Δ133-p53β) |
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|
| |
6.3.1.0.1.9 |
p53, isoform 9 (Δ133-p53γ) |
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|
| |
6.3.1.0.2 |
p63 |
 |
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|
| |
6.3.1.0.2.1 |
p63, isoform 1 (p63α) |
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|
| |
6.3.1.0.2.2 |
p63, isoform 2 (ΔN-p63α) |
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|
| |
6.3.1.0.2.3 |
p63, isoform 3 (p63β) |
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|
| |
6.3.1.0.2.4 |
p63, isoform 4 (ΔN-p63β) |
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|
| |
6.3.1.0.2.5 |
p63, isoform 5 (p63γ) |
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|
| |
6.3.1.0.2.6 |
p63, isoform 6 (ΔN-p63γ) |
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|
| |
6.3.1.0.2.7 |
p63, isoform 7 (p63δ) |
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|
| |
6.3.1.0.2.8 |
p63, isoform 8 (ΔN-p63δ) |
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|
| |
6.3.1.0.2.9 |
p63, isoform 9 (p63ε) |
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|
| |
6.3.1.0.2.10 |
p63, isoform 10 (ΔN-p63ε) |
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|
| |
6.3.1.0.2.11 |
p63, isoform 11 |
|
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|
| |
6.3.1.0.2.12 |
p63, isoform 12 |
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|
| |
6.3.1.0.3 |
p73 |
 |
|
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|
| |
6.3.1.0.3.1 |
p73, isoform α |
|
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|
| |
6.3.1.0.3.2 |
p73, isoform β |
|
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|
| |
6.3.1.0.3.3 |
p73, isoform γ |
|
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|
| |
6.3.1.0.3.4 |
p73, isoform δ |
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|
| |
6.3.1.0.3.5 |
p73, isoform ε |
|
|
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|
| |
6.3.1.0.3.6 |
p73, isoform ζ |
|
|
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|
|
| |
6.3.1.0.3.7 |
p73, isoform dNα |
|
|
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|
| |
6.3.1.0.3.8 |
p73, isoform dNβ |
|
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|
| |
6.3.1.0.3.9 |
p73, isoform dNγ |
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|
| |
6.3.1.0.3.10 |
p73, isoform 10 |
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|
| |
6.3.1.0.3.11 |
p73, isoform 11 |
|
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|
|
| |
6.3.1.0.3.12 |
p73, isoform 12 |
|
|
|
|
|
| |
6.4 |
Class: Runt domain factors |
|
|
|
| |
6.4.1 |
Family: Runt-related factors |
TGTGGT |
|
| |
6.4.1.0.1 |
Runx2 (PEBP2αA, CBF-α1) |
 |
|
|
|
|
F |
|
| |
6.4.1.0.1.1 |
CBF-α1a, isoform 1 |
|
|
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|
|
| |
6.4.1.0.1.2 |
Runx2, isoform 2 |
|
|
|
|
|
| |
6.4.1.0.1.3 |
CBF-α1b, isoform 3 |
|
|
|
|
|
| |
6.4.1.0.2 |
Runx1 (PEBP2αB, CBF-α2, AML-1) |
|
|
|
|
|
|
|
| |
6.4.1.0.2.1 |
AML-1A |
|
|
|
|
|
| |
6.4.1.0.2.2 |
AML-1B |
|
|
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|
| |
6.4.1.0.2.3 |
AML-1C |
|
|
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|
| |
6.4.1.0.2.4 |
AML-1E |
|
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|
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|
| |
6.4.1.0.2.5 |
AML-1FA |
|
|
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|
|
| |
6.4.1.0.2.6 |
AML-1FB |
|
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|
| |
6.4.1.0.2.7 |
AML-1FC |
|
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|
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|
| |
6.4.1.0.2.8 |
AML-1G |
|
|
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|
|
| |
6.4.1.0.2.9 |
AML-1H |
|
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|
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|
| |
6.4.1.0.2.10 |
AML-1I |
|
|
|
|
|
| |
6.4.1.0.2.11 |
AML-1L |
|
|
|
|
|
| |
6.4.1.0.3 |
Runx3 (PEBP2αC, CBF-α3, AML-2) |
 |
|
|
|
|
|
|
| |
6.4.1.0.3.1 |
Runx3, isoform 1 |
|
|
|
|
|
| |
6.4.1.0.3.2 |
Runx3, isoform 2 |
|
|
|
|
|
| |
6.5 |
Class: T-Box factors |
|
|
|
| |
6.5.1 |
Family: Brachyury-related factors |
TCACACCTAGGTGTGAAATT |
|
| |
6.5.1.0.1 |
T (Brachyury, TBXT) |
 |
|
|
|
|
|
|
| |
6.5.1.0.1.1 |
T, isoform 1 |
|
|
|
|
|
| |
6.5.1.0.1.2 |
T, isoform 2 |
|
|
|
|
|
| |
6.5.1.0.2 |
TBX19 |
 |
|
|
|
|
|
|
| |
6.5.2 |
Family: TBrain-related factors |
AGGTGTGAA |
|
| |
6.5.2.0.1 |
TBR-1 |
 |
|
|
|
|
|
|
| |
6.5.2.0.1.1 |
TBR-1, isoform 1 |
|
|
|
|
|
| |
6.5.2.0.1.2 |
TBR-1, isoform 2 |
|
|
|
|
|
| |
6.5.2.0.2 |
TBR-2 (EOMES) |
 |
|
|
|
|
F |
|
| |
6.5.2.0.2.1 |
TBR-2, isoform 1 |
|
|
|
|
|
| |
6.5.2.0.2.2 |
TBR-2, isoform 2 |
|
|
|
|
|
| |
6.5.2.0.2.3 |
TBR-2, isoform 3 |
|
|
|
|
|
| |
6.5.2.0.2.4 |
TBR-2, isoform 4 |
|
|
|
|
|
| |
6.5.2.0.3 |
TBX21 (T-bet) |
 |
|
|
|
|
|
|
| |
6.5.3 |
Family: TBX1-related factors |
|
|
| |
6.5.3.0.1 |
TBX1 |
 |
|
|
|
|
|
|
| |
6.5.3.0.1.1 |
TBX1, isoform A |
|
|
|
|
|
| |
6.5.3.0.1.2 |
TBX1, isoform B |
|
|
|
|
|
| |
6.5.3.0.1.3 |
TBX1, isoform C |
|
|
|
|
|
| |
6.5.3.0.2 |
TBX10 (TBX7) |
|
|
|
|
|
|
|
| |
6.5.3.0.3 |
TBX15 (TBX14) |
 |
|
|
|
|
|
|
| |
6.5.3.0.3.1 |
TBX15, isoform 1 |
|
|
|
|
|
| |
6.5.3.0.3.2 |
TBX15, isoform 2 |
|
|
|
|
|
| |
6.5.3.0.4 |
TBX18 |
|
|
|
|
|
|
|
| |
6.5.3.0.5 |
TBX20 |
 |
|
|
|
|
|
|
| |
6.5.3.0.6 |
TBX22 |
|
|
|
|
|
|
|
| |
6.5.3.0.6.1 |
TBX22, isoform 1 |
|
|
|
|
|
| |
6.5.3.0.6.2 |
TBX22, isoform 2 |
|
|
|
|
|
| |
6.5.4 |
Family: TBX2-related factors |
AGGTGTGAG |
|
| |
6.5.4.0.1 |
TBX2 |
 |
|
|
|
|
|
|
| |
6.5.4.0.2 |
TBX3 |
|
|
|
|
|
|
|
| |
6.5.4.0.2.1 |
TBX3, isoform I |
|
|
|
|
|
| |
6.5.4.0.2.2 |
TBX3, isoform II |
|
|
|
|
|
| |
6.5.4.0.2.3 |
TBX3, isoform III |
|
|
|
|
|
| |
6.5.4.0.2.4 |
TBX3, isoform IV |
|
|
|
|
|
| |
6.5.4.0.3 |
TBX4 |
 |
|
|
|
|
|
|
| |
6.5.4.0.3.1 |
TBX4, isoform 1 |
|
|
|
|
|
| |
6.5.4.0.3.2 |
TBX4, isoform 2 |
|
|
|
|
|
| |
6.5.4.0.4 |
TBX5 |
 |
|
|
|
|
|
|
| |
6.5.4.0.4.1 |
TBX5, isoform 1 (Long) |
|
|
|
|
|
| |
6.5.4.0.4.2 |
TBX5, isoform 2 (Short) |
|
|
|
|
|
| |
6.5.4.0.4.3 |
TBX5, isoform 3 |
|
|
|
|
|
| |
6.5.5 |
Family: TBX6-related factors |
AATTTCACACCTAGGTGTGAAATT |
|
| |
6.5.5.0.1 |
TBX6 |
|
|
|
|
|
|
|
| |
6.5.5.0.1.1 |
TBX6, isoform 1 |
|
|
|
|
|
| |
6.5.5.0.1.2 |
TBX6, isoform 2 |
|
|
|
|
|
| |
6.5.5.0.2 |
MGA (MAD5) = 1.2.6.8.1 |
 |
|
|
|
|
|
|
| |
6.5.5.0.2.1 |
Mad5, isoform 1 |
|
|
|
|
|
| |
6.5.5.0.2.2 |
Mad5, isoform 2 |
|
|
|
|
|
| |
6.5.5.0.2.3 |
Mad5, isoform 3 |
|
|
|
|
|
| |
6.5.5.0.2.4 |
Mad5, isoform 4 |
|
|
|
|
|
| |
6.6 |
Class: NDT80 domain factors |
|
|
| |
6.6.1 |
Family: Myelin gene regulatory factor-related factors |
|
|
| |
6.6.1.0.1 |
Myelin gene regulatory factor (MYRF, MRF, C11orf9) |
|
|
|
|
|
|
|
| |
6.6.1.0.1.1 |
MYRF, isoform 1 |
|
|
|
|
|
| |
6.6.1.0.1.2 |
MYRF, isoform 2 |
|
|
|
|
|
| |
6.7 |
Class: Grainyhead domain factors |
|
|
| |
6.7.1 |
Family: Grainyhead-related factors |
|
|
| |
6.7.1.1 |
Subfamily: GRH-like proteins |
|
|
| |
6.7.1.1.1 |
GRH-L1 (CP2-L2, LBP-32, MGR) |
 |
|
|
|
|
F |
|
| |
6.7.1.1.1.1 |
p70 MGR, isoform 1 |
|
|
|
|
|
| |
6.7.1.1.1.2 |
p49 MGR, isoform 2 |
|
|
|
|
|
| |
6.7.1.1.1.3 |
GRH-L1, isoform 3 |
|
|
|
|
|
| |
6.7.1.1.2 |
GRH-L2 (CP2-L3) |
|
|
|
|
|
|
|
| |
6.7.1.1.2.1 |
GRH-L2, isoform 1 |
|
|
|
|
|
| |
6.7.1.1.2.2 |
GRH-L2, isoform 2 |
|
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|
|
|
| |
6.7.1.1.3 |
GRH-L3 (CP2-L4) |
|
|
|
|
|
|
|
| |
6.7.1.1.3.1 |
GRH-L3, isoform 1 |
|
|
|
|
|
| |
6.7.1.1.3.2 |
GRH-L3, isoform 2 |
|
|
|
|
|
| |
6.7.1.1.3.3 |
GRH-L3, isoform 3 |
|
|
|
|
|
| |
6.7.1.1.3.4 |
GRH-L3, isoform 4 |
|
|
|
|
|
| |
6.7.1.1.3.5 |
GRH-L3, isoform 5 |
|
|
|
|
|
| |
6.7.2 |
Family: CP2-related factors |
GCACAAACCAG |
|
| |
6.7.2.0.1 |
CP2 (LSF, SEF) |
 |
|
|
|
|
|
|
| |
6.7.2.0.1.1 |
CP2, isoform 1 (LBP-1c) |
|
|
|
|
|
| |
6.7.2.0.1.2 |
CP2, isoform 2 |
|
|
|
|
|
| |
6.7.2.0.1.3 |
CP2, isoform 3 (LBP-1d) |
|
|
|
|
|
| |
6.7.2.0.1.4 |
CP2, isoform 4 |
|
|
|
|
|
| |
6.7.2.0.2 |
CP2-L1 (LBP-9, CRTR-1) |
|
|
|
|
|
|
|
| |
6.7.2.0.3 |
UBP-1 (LBP-1, SEF) |
|
|
|
|
|
|
|
| |
6.7.2.0.3.1 |
LBP-1b, isoform 1 |
|
|
|
|
|
| |
6.7.2.0.3.2 |
LBP-1a, isoform 2 |
|
|
|
|
|
|
| 7 |
Superclass:
β-Hairpin exposed by an α/β-scaffold |
|
|
| |
7.1 |
Class: SMAD/NF-1 DNA-binding domain factors |
|
|
|
| |
7.1.1 |
Family: SMAD factors |
GTCTAGAC |
|
| |
7.1.1.1 |
Subfamily: Regulatory Smads (R-Smad) |
|
|
| |
7.1.1.1.1 |
SMAD1 |
|
|
|
|
|
|
|
| |
7.1.1.1.1.1 |
SMAD1, isoform 1 |
|
|
|
|
|
| |
7.1.1.1.1.2 |
SMAD1, isoform 2 |
|
|
|
|
|
| |
7.1.1.1.2 |
SMAD2 |
|
|
|
|
|
|
|
| |
7.1.1.1.2.1 |
SMAD2, isoform long |
|
|
|
|
|
| |
7.1.1.1.2.2 |
SMAD2, isoform short |
|
|
|
|
|
| |
7.1.1.1.3 |
SMAD3 |
 |
|
|
|
|
|
|
| |
7.1.1.1.3.1 |
SMAD3, isoform 1 |
|
|
|
|
|
| |
7.1.1.1.3.2 |
SMAD3, isoform 2 |
|
|
|
|
|
| |
7.1.1.1.3.3 |
SMAD3, isoform 3 |
|
|
|
|
|
| |
7.1.1.1.3.4 |
SMAD3, isoform 4 |
|
|
|
|
|
| |
7.1.1.1.4 |
SMAD5 |
|
|
|
|
|
|
|
| |
7.1.1.1.5 |
SMAD9 (SMAD8) |
|
|
|
|
|
|
|
| |
7.1.1.1.5.1 |
SMAD9, isoform A |
|
|
|
|
|
| |
7.1.1.1.5.2 |
SMAD9, isoform B |
|
|
|
|
|
| |
7.1.1.2 |
Subfamily: Co-activating Smads (Co-Smad) |
|
|
| |
7.1.1.2.1 |
SMAD4 |
|
|
|
|
|
|
|
| |
7.1.1.3 |
Subfamily: Repressor-Smads (I-Smad) |
|
|
| |
7.1.1.3.1 |
SMAD6 |
|
|
|
|
|
|
|
| |
7.1.1.3.1.1 |
SMAD6, isoform A |
|
|
|
|
|
| |
7.1.1.3.1.2 |
SMAD6S, isoform B |
|
|
|
|
|
| |
7.1.1.3.1.3 |
SMAD6, isoform D |
|
|
|
|
|
| |
7.1.1.3.2 |
SMAD7 |
|
|
|
|
|
|
|
| |
7.1.1.3.2.1 |
SMAD7, isoform 1 |
|
|
|
|
|
| |
7.1.1.3.2.2 |
SMAD7, isoform 2 |
|
|
|
|
|
| |
7.1.1.3.2.3 |
SMAD7, isoform 3 |
|
|
|
|
|
| |
7.1.2 |
Family: Nuclear factor 1 |
TTGGCTATATGCCAA |
|
| |
7.1.2.0.1 |
NF-1A (NF-IA) |
 |
|
|
|
|
|
|
| |
7.1.2.0.1.1 |
NF-1A, isoform 1 |
|
|
|
|
|
| |
7.1.2.0.1.2 |
NF-1A, isoform 2 |
|
|
|
|
|
| |
7.1.2.0.1.3 |
NF-1A, isoform 3 |
|
|
|
|
|
| |
7.1.2.0.1.4 |
NF-1A, isoform 4 |
|
|
|
|
|
| |
7.1.2.0.2 |
NF-1B (NF-IB) |
 |
|
|
|
|
|
|
| |
7.1.2.0.2.1 |
NF-1B2, isoform 1 |
|
|
|
|
|
| |
7.1.2.0.2.2 |
NF-1B, isoform 2 |
|
|
|
|
|
| |
7.1.2.0.2.3 |
NF-1B3, isoform 3 |
|
|
|
|
|
| |
7.1.2.0.2.4 |
NF-1B3, isoform 4 |
|
|
|
|
|
| |
7.1.2.0.2.5 |
NF-1B3, isoform 5 |
|
|
|
|
|
| |
7.1.2.0.2.6 |
NF-1B3, isoform 6 |
|
|
|
|
|
| |
7.1.2.0.3 |
NF-1C (NF-IC) |
|
|
|
|
|
|
|
| |
7.1.2.0.3.1 |
NF-1C, isoform 1 |
|
|
|
|
|
| |
7.1.2.0.3.2 |
NF-1C, isoform 2 (CTF-2) |
|
|
|
|
|
| |
7.1.2.0.3.3 |
NF-1C, isoform 3 (CTF-3) |
|
|
|
|
|
| |
7.1.2.0.3.4 |
NF-1C, isoform 4 (CTF-1) |
|
|
|
|
|
| |
7.1.2.0.3.5 |
NF-1C, isoform 5 (CTF-5) |
|
|
|
|
|
| |
7.1.2.0.3.6 |
NF-1C, isoform 6 |
|
|
|
|
|
| |
7.1.2.0.4 |
NF-1X (NF-IX) |
 |
|
|
|
|
|
|
| |
7.1.2.0.4.1 |
NF-1X, isoform 1 |
|
|
|
|
|
| |
7.1.2.0.4.2 |
NF-1X, isoform 2 |
|
|
|
|
|
| |
7.1.2.0.4.3 |
NF-1X, isoform 3 |
|
|
|
|
|
| |
7.1.2.0.4.4 |
NF-1X, isoform 4 |
|
|
|
|
|
| |
7.1.2.0.4.5 |
NF-1X, isoform 5 |
|
|
|
|
|
| |
7.1.2.0.4.6 |
NF-1X, isoform 6 |
|
|
|
|
|
| |
7.2 |
Class: GCM domain factors |
|
|
| |
7.2.1 |
Family: GCM factors |
|
|
| |
7.2.1.0.1 |
GCMa (GCM1) |
 |
|
|
|
|
|
|
| |
7.2.1.0.2 |
GCMb (GCM2) |
 |
|
|
|
|
|
|
|
| 8 |
Superclass:
β-Sheet binding to DNA |
|
|
| |
8.1 |
Class: TATA-binding proteins |
|
|
|
| |
8.1.1 |
Family: TBP-related factors |
TATAAA) |
|
| |
8.1.1.0.1 |
TBP |
|
|
|
|
|
|
|
| |
8.1.1.0.1.1 |
TBP, isoform 1 |
|
|
|
|
|
| |
8.1.1.0.1.2 |
TBP, isoform 2 |
|
|
|
|
|
| |
8.1.1.0.2 |
TBP-L1 (TRF2) |
|
|
|
|
|
|
|
| |
8.1.1.0.3 |
TBP-L2 (TRF3) |
|
|
|
|
|
|
|
| |
8.2 |
Class: A.T hook factors |
|
|
|
| |
8.2.1 |
Family: HMGA factors |
GGAAATT |
|
| |
8.2.1.0.1 |
HMGA1 (HMGI(Y)) |
|
|
|
|
|
|
|
| |
8.2.1.0.1.1 |
HMGA1a, isoform HMG-I |
|
|
|
|
|
| |
8.2.1.0.1.2 |
HMGA1b, isoform HMG-Y |
|
|
|
|
|
| |
8.2.1.0.1.3 |
HMGA1c, isoform HMG-R |
|
|
|
|
|
| |
8.2.1.0.2 |
HMGA2 (HMGI-C) |
|
|
|
|
|
|
|
| |
8.2.1.0.2.1 |
HMGA2, isoform 1 (HMGA2a) |
|
|
|
|
|
| |
8.2.1.0.2.2 |
HMGA2, isoform 2 (HMGA2f) |
|
|
|
|
|
| |
8.2.1.0.2.3 |
HMGA2, isoform 3 (HMGA2d') |
|
|
|
|
|
| |
8.2.1.0.2.4 |
HMGA2, isoform 4 (HMGA2d) |
|
|
|
|
|
| |
8.2.1.0.2.5 |
HMGA2, isoform 5 (HMGA2c') |
|
|
|
|
|
| |
8.2.1.0.2.6 |
HMGA2, isoform 6 (HMGA2c) |
|
|
|
|
|
|
| 9 |
Superclass: β-Barrel DNA-binding domains |
|
|
| |
9.1 |
Class: Cold-shock domain factors |
|
|
|
| |
9.1.1 |
Family: Dbp factors |
CCAATCAG |
|
| |
9.1.1.1 |
Subfamily: A (DbpA-like) |
|
|
| |
9.1.1.1.1 |
DbpA (YBX3) |
|
|
|
|
|
|
|
| |
9.1.1.1.1.1 |
DbpA, isoform 1 |
|
|
|
|
|
| |
9.1.1.1.1.2 |
DbpA, isoform 2 |
|
|
|
|
|
| |
9.1.1.1.1.3 |
DbpA, isoform 3 |
|
|
|
|
|
| |
9.1.1.2 |
Subfamily: B (DbpB/YB-1-like) |
|
|
| |
9.1.1.2.1 |
YB-1 (DbpB, YBX1) |
|
|
|
|
|
|
|
| |
9.1.1.3 |
Subfamily: C (FRG Y2-like) |
|
|
| |
9.1.1.3.1 |
YBX2 (DbpC, MSY2, FRG Y2) |
|
|
|
|
|
|
|
|
| 0 |
Superclass: Yet undefined DNA-binding domains |
|
|
| |
0.1 |
Class: AXUD/CSRNP domain factors |
|
|
| |
0.1.1 |
Family: CSRNP factors |
AGAGTG |
|
| |
0.1.1.0.1 |
CSRNP-1 (AXUD1, TAIP3) |
|
|
|
|
|
|
|
| |
0.1.1.0.2 |
CSRNP-2 (TAIP12) |
|
|
|
|
|
|
|
| |
0.1.1.0.3 |
CSRNP-3 (TAIP2) |
|
|
|
|
|
F |
|
| |
0.1.1.0.3.1 |
CSRNP-3, isoform 1 |
|
|
|
|
|
| |
0.1.1.0.3.2 |
CSRNP-3, isoform 2 |
|
|
|
|
|
| |
0.2 |
Class: NonO domain factors |
|
|
| |
0.2.1 |
Family: NonO-related factors |
|
|
| |
0.2.1.0.1 |
NONO (NMT55, p54(nrb), NRB54) |
|
|
|
|
|
|
|
| |
0.2.1.0.1.1 |
NONO, isoform 1 |
|
|
|
|
|
| |
0.2.1.0.1.2 |
NONO, isoform 2 |
|
|
|
|
|
| |
0.2.1.0.2 |
SFPQ (PSF) |
|
|
|
|
|
|
|
| |
0.2.1.0.2.1 |
SFPQ, isoform Long (A) |
|
|
|
|
|
| |
0.2.1.0.2.2 |
SFPQ, isoform Short (F) |
|
|
|
|
|
| |
0.2.1.0.3 |
PSPC1 (PSP1, Paraspeckle component 1) |
|
|
|
|
|
|
|
| |
0.2.1.0.3.1 |
PSPC1, isoform 1 (PSP1-α) |
|
|
|
|
|
| |
0.2.1.0.3.2 |
PSPC1, isoform 2 (PSP1-β) |
|
|
|
|
|
| |
0.3 |
Class: Leucine-rich repeat flightless-interacting proteins |
|
|
| |
0.3.1 |
Family: LRRFIP factors |
AGCCCCCGGCG |
|
| |
0.3.1.0.1 |
LRRFIP1 (GCF2, TRIP) |
|
|
|
|
|
|
|
| |
0.3.1.0.1.1 |
LRRFIP1, isoform 1 |
|
|
|
|
|
| |
0.3.1.0.1.2 |
LRRFIP1, isoform 2 |
|
|
|
|
|
| |
0.3.1.0.1.3 |
LRRFIP1, isoform 3 |
|
|
|
|
|
| |
0.3.1.0.1.4 |
LRRFIP1, isoform 4 |
|
|
|
|
|
| |
0.3.1.0.2 |
LRRFIP2 |
|
|
|
|
|
|
|
| |
0.3.1.0.2.1 |
LRRFIP2, isoform 1 |
|
|
|
|
|
| |
0.3.1.0.2.2 |
LRRFIP2, isoform 2 |
|
|
|
|
|
| |
0.3.1.0.2.3 |
LRRFIP2, isoform 3 |
|
|
|
|
|
| |
0.3.1.0.2.4 |
LRRFIP2, isoform 4 |
|
|
|
|
|
| |
0.3.1.0.2.5 |
LRRFIP2, isoform 5 |
|
|
|
|
|
| |
0.4 |
Class: NFX1-type putative zinc finger factors |
|
|
| |
0.4.1 |
Family: NFX1 |
CCTAGCAACAGATG |
|
| |
0.4.1.0.1 |
NFX1 (NFX2) |
|
|
|
|
|
|
|
| |
0.4.1.0.1.1 |
NFX1, isoform 1 (NFX-123) |
|
|
|
|
|
| |
0.4.1.0.1.2 |
NFX1, isoform 2 |
|
|
|
|
|
| |
0.4.1.0.1.3 |
NFX1, isoform 3 (NFX-91) |
|
|
|
|
|
| |
0.4.1.0.2 |
NFXL1 (OZFP) |
|
|
|
|
|
|
|
| |
0.4.1.0.2.1 |
NFXL1, isoform 1 |
|
|
|
|
|
| |
0.4.1.0.2.2 |
NFXL1, isoform 2 |
|
|
|
|
|
| |
0.4.1.0.3 |
ZNFX1 |
|
|
|
|
|
|
|
| |
0.4.1.0.3.1 |
ZNFX1, isoform 1 |
|
|
|
|
|
| |
0.4.1.0.3.2 |
ZNFX1, isoform 2 |
|
|
|
|
|
| |
0.5 |
Class: GTF2I domain factors |
|
|
| |
0.5.1 |
Family: TFII-I-related |
YCAYY |
|
| |
0.5.1.0.1 |
TFII-I (GTF2I) [6] |
|
|
|
|
|
|
|
| |
0.5.1.0.1.1 |
TFII-I, isoform 1 |
|
|
|
|
|
| |
0.5.1.0.1.2 |
TFII-I, isoform 2 |
|
|
|
|
|
| |
0.5.1.0.1.3 |
TFII-I, isoform 3 |
|
|
|
|
|
| |
0.5.1.0.1.4 |
TFII-I, isoform 4 |
|
|
|
|
|
| |
0.5.1.0.1.5 |
TFII-I, isoform 5 |
|
|
|
|
|
| |
0.5.1.0.2 |
GTF3 (GTF2IRD1, MusTRD1/BEN) [5] |
|
|
|
|
|
|
|
| |
0.5.1.0.2.1 |
GTF3, isoform 1 |
|
|
|
|
|
| |
0.5.1.0.2.2 |
GTF3, isoform 2 |
|
|
|
|
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0.5.1.0.2.3 |
GTF3, isoform 3 |
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0.5.1.0.3 |
GTF2IRD2-alpha, (GTF2IRD2, GTF2IRD2A) [2] |
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0.5.1.0.3.1 |
GTF2IRD2-alpha, isoform 1 |
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0.5.1.0.3.2 |
GTF2IRD2-alpha, isoform 2 |
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0.5.1.0.3.3 |
GTF2IRD2-alpha, isoform 3 |
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0.5.1.0.3.4 |
GTF2IRD2-alpha, isoform 4 |
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0.5.1.0.3.5 |
GTF2IRD2-alpha, isoform 5 |
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0.5.1.0.3.6 |
GTF2IRD2-alpha, isoform 6 |
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0.5.1.0.4 |
GTF2IRD2-beta, (GTF2IRD2B) [2] |
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0.5.1.0.4.1 |
GTF2IRD2-beta, isoform 1 |
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0.5.1.0.4.2 |
GTF2IRD2-beta, isoform 2 |
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0.6 |
Class: CG-1 domain factors |
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0.6.1 |
Family: CAMTA factors |
CGCG |
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0.6.1.0.1 |
CAMTA1 |
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0.6.1.0.1.1 |
CAMTA1, isoform 1 |
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0.6.1.0.1.2 |
CAMTA1, isoform 2 |
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0.6.1.0.1.3 |
CAMTA1, isoform 3 |
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0.6.1.0.1.4 |
CAMTA1, isoform 4 |
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0.6.1.0.2 |
CAMTA2 |
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0.6.1.0.2.1 |
CAMTA2, isoform 1 |
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0.6.1.0.2.2 |
CAMTA2, isoform 2 |
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0.6.1.0.2.3 |
CAMTA2, isoform 3 |
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0.6.1.0.2.4 |
CAMTA2, isoform 4 |
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0.6.1.0.2.5 |
CAMTA2, isoform 5 |
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0.6.1.0.2.6 |
CAMTA2, isoform 6 |
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0.0 |
Class: Uncharacterized |
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0.0.1 |
Family: Nuclear localized protein 1 |
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0.0.1.0.1 |
NULP1 (TCF25) |
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0.0.2 |
Family: PHF5 |
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0.0.2.0.1 |
PHF5A (Ini, SF3b14b) |
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0.0.3 |
Family: RFXANK |
CAGTTGCCTAGCAACTA |
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0.0.3.0.1 |
RFXANK (ANKRA1, RFXB, Tvl-1) |
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0.0.3.0.1.1 |
RFXANK, isoform 1 (Long) |
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0.0.3.0.1.2 |
RFXANK, isoform 2 (RFX-B-δ5) |
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0.0.3.0.1.3 |
RFXANK, isoform 3 |
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0.0.4 |
Family: RFXAP |
CAGTTGCCTAGCAACTA |
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0.0.4.0.1 |
RFXAP |
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0.0.5 |
Family: PUR |
TGGCCAGGG |
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0.0.5.0.1 |
Pur-α (PURA, PUR1) |
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0.0.5.0.2 |
Pur-β (PURB) |
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0.0.5.0.3 |
Pur-γ (PURG) |
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0.0.5.0.3.1 |
Pur-γ, isoform 1 (PURG-A) |
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0.0.5.0.3.2 |
Pur-γ, isoform 2 (PURG-B) |
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0.0.6 |
Family: NRF |
CGCATGCGCA |
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0.0.6.0.1 |
NRF-1 (α-pal) |
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0.0.6.0.1.1 |
NRF-1, isoform 1 (Long) |
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0.0.6.0.1.2 |
NRF-1, isoform 2 (Short) |
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0.0.6.0.1.3 |
NRF-1, isoform 3 |
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0.0.6.0.1.4 |
NRF-1, isoform 4 |
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0.0.7 |
Family: SPEN factors |
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0.0.7.0.1 |
Msx2-IP (SPEN) |
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