Classification of Human Transcription Factors
- All Levels - |
| October 05, 2018 |
This classification is subject to occasional changes, as new insights to transcription factors and their structures appear. A working version with some recent changes that are subject to discussion may be found here.
A more extended version with a more flexible visualization and covering other mammalian TFs has been made available using Jürgen Dönitz' OBA server (click here). Moreover, it is also accessible in and used by the geneXplain platform. Also available is the classification of the orthologous murine TFs.
Symbols / links:
 : TRANSFAC® class descriptions;  : new class descriptions;  : additional information about the class and its members (see below);
 : Link to UniProt;  ,  : links to Protein Atlas, to items without / with antibody characterization, resp.
 : TRANSFAC accession numbers, mostly linked to TRANSFAC Professional (license required);  provides a link to a HumanPSD entry that has no TRANSFAC accession yet.
 : Reviewed UniProt entry of the corresponding mouse orthologs (Genus level only)
 :Non-reviewed UniProt entry of the corresponding mouse orthologs (Genus level only)
 : Reviewed UniProt entries of the corresponding rat orthologs (Genus level only)
 : Non-reviewed UniProt entries of the corresponding rat orthologs (Genus level only)
 : Link to PDB; preferably to a complex of the corresponding DNA-binding domain (DBD) with DNA, provisionally the DBD alone, referring to the human or a mammalian ortholog; for a few exceptions, illustrative structures of fungal homologs are linked.
Additional information:
The question mark in the Class title line links to the class description, the sequences of the manually adjusted DNA-binding domains of this respective class and their alignments, logo plots and, whenever relevant, further information like dimerization matrices etc.
DNA sequence patterns:
The DNA sequences assigned to many families or subfamilies represent typical or proven individual binding sequences for (some of) the domains in the respective taxon. They should not be taken as a consensus, and they are not suitable for predicting potential TF binding sites.
The logo plots after many TF genera have been derived from the profile library published by the group of J. Taipale at Karolinska Institute (Jolma et al., Cell 152, 327-339 (2013); PubMed 23332764) and were kindly provided by P. Stegmaier (geneXplain GmbH). Each of these plots is linked to an htm file with all matrices for this factor, human and mouse, that were given by Jolma et al., one of them being selected for the logo plot. The individual matrices are given a unique ID, comprising the gene symbol of the factor and an alphanumeric specification of the respective matrix, which may be either a consecutive number, or may have an additional "m" to indicate monomeric factor binding mode, "d" for dimers, or "dd" for dimers of dimers bound to the respective sequence patterns. For further explanation of the information provided with each matrix, kindly refer to the original publication.
Citation:
Wingender, E., Schoeps, T. and Dönitz, J.: TFClass: An expandable hierarchical classification of human transcription factors. Nucleic Acids Res. 41, D165-D170 (2013). doi: 10.1093/nar/gks1123 (Link)
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| Display detail:
All levels |
Superclasses |
Classes |
Families |
Subfamilies |
Genera
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| 1 |
Superclass: Basic domains |
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1.1 |
Class: Basic leucine zipper factors (bZIP) |
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1.1.1 |
Family: Jun-related factors |
TGAGTCA |
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1.1.1.1 |
Subfamily: Jun factors |
TGAGTCA |
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1.1.1.1.1 |
c-Jun |
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1.1.1.1.2 |
JunB |
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1.1.1.1.3 |
JunD |
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1.1.1.2 |
Subfamily: NF-E2-like factors |
GCTGAGTCA |
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1.1.1.2.1 |
NF-E2 p45 |
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1.1.1.2.2 |
NF-E2L1 (NRF1) |
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1.1.1.2.2.1 |
NF-E2L1, isoform 1 |
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1.1.1.2.2.2 |
NF-E2L1, isoform 2 |
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1.1.1.2.3 |
NF-E2L2 (NRF2) |
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1.1.1.2.3.1 |
NF-E2L2, isoform 1 |
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1.1.1.2.3.2 |
NF-E2L2, isoform 2 |
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1.1.1.2.3.3 |
NF-E2L2, isoform 3 |
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1.1.1.2.4 |
NF-E2L3 (NRF3) |
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1.1.1.2.5 |
BACH1 |
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1.1.1.2.6 |
BACH2 |
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1.1.1.3 |
Subfamily: ATF-2-like factors |
TGACGTCA |
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1.1.1.3.1 |
ATF-2 |
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1.1.1.3.1.1 |
ATF-2, isoform 1 |
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1.1.1.3.1.2 |
ATF-2, isoform 2 |
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1.1.1.3.1.3 |
ATF-2, isoform 3 |
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1.1.1.3.1.4 |
ATF-2, isoform 4 |
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1.1.1.3.1.5 |
ATF-2, isoform 5 |
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1.1.1.3.1.6 |
ATF-2, isoform 6 |
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1.1.1.3.1.7 |
ATF-2, isoform 7 |
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1.1.1.3.1.8 |
ATF-2, isoform 8 (ATF2-small) |
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1.1.1.3.2 |
ATF-7 |
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1.1.1.3.2.1 |
ATF-A, isoform 1 |
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1.1.1.3.2.2 |
ATF-Aδ, isoform 2 |
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1.1.1.3.2.3 |
ATF-A1, isoform 3 |
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1.1.1.3.2.4 |
ATF-7A0, isoform 4 |
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1.1.1.3.2.5 |
ATF-7 (ATF-4), isoform 5 |
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1.1.1.3.2.6 |
ATF-7, isoform 6 |
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1.1.1.3.3 |
CREB-5 (CRE-BPa) |
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1.1.1.3.3.1 |
CREB-5α, isoform 1 |
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1.1.1.3.3.2 |
CREB-5β, isoform 2 |
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1.1.1.3.3.3 |
CREB-5γ, isoform 3 |
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1.1.1.3.3.4 |
CREB-5δ, isoform 4 |
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1.1.2 |
Family: Fos-related factors |
(TGAGTCA) |
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1.1.2.1 |
Subfamily: Fos factors |
(TGAGTCA) |
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1.1.2.1.1 |
c-Fos |
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1.1.2.1.1.1 |
c-Fos, isoform 1 |
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1.1.2.1.1.2 |
c-Fos, isoform 2 |
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1.1.2.1.1.3 |
c-Fos, isoform 3 |
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1.1.2.1.2 |
FosB |
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1.1.2.1.2.1 |
FosB, isoform 1 |
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1.1.2.1.2.2 |
FosB, isoform 2 |
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1.1.2.1.2.3 |
FosB, isoform 3 |
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1.1.2.1.2.4 |
FosB, isoform 4 |
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1.1.2.1.2.5 |
FosB, isoform 5 |
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1.1.2.1.2.6 |
FosB, isoform 6 |
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1.1.2.1.2.7 |
FosB, isoform 7 |
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1.1.2.1.2.8 |
FosB, isoform 8 |
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1.1.2.1.2.9 |
FosB, isoform 9 |
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1.1.2.1.2.10 |
FosB, isoform 10 |
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1.1.2.1.3 |
Fra-1 (FosL1) |
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1.1.2.1.3.1 |
Fra-1, isoform 1 |
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1.1.2.1.3.2 |
Fra-1, isoform 2 |
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1.1.2.1.4 |
Fra-2 (FosL2) |
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1.1.2.1.4.1 |
Fra-2, isoform 1 |
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1.1.2.1.4.2 |
Fra-2, isoform 2 |
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1.1.2.1.4.3 |
Fra-2, isoform 3 |
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1.1.2.2 |
Subfamily: ATF-3-like factors |
TGACGTCA |
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1.1.2.2.1 |
ATF-3 |
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1.1.2.2.1.1 |
ATF-3, isoform 1 |
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1.1.2.2.1.2 |
ATF-3ΔZIP, isoform 2 |
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1.1.2.2.1.3 |
ATF-3ΔZIP2a / ATF-3ΔZIP2b, isoform 3 |
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1.1.2.2.1.4 |
ATF-3ΔZIP2c, isoform 4 |
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1.1.2.2.1.5 |
ATF-3, isoform 5 |
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1.1.2.2.2 |
JDP-2 |
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1.1.2.2.2.1 |
JDP-2, isoform 1 |
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1.1.2.2.2.2 |
JDP-2, isoform 2 |
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1.1.3 |
Family: Maf-related factors |
TGCTGACTCAGCA |
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1.1.3.1 |
Subfamily: Large Maf factors |
TGCTGACTCAGCA |
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1.1.3.1.1 |
c-Maf |
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1.1.3.1.1.1 |
c-Maf, isoform 1 |
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1.1.3.1.1.2 |
c-Maf, isoform 2 |
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1.1.3.1.2 |
MafA |
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1.1.3.1.3 |
MafB |
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1.1.3.1.4 |
Nrl |
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1.1.3.1.4.1 |
Nrl, isoform 1 |
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1.1.3.1.4.2 |
Nrl, isoform 2 |
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1.1.3.2 |
Subfamily: Small Maf factors |
TGCTGACTCAGCA |
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1.1.3.2.1 |
MafF |
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1.1.3.2.1.1 |
MafF, isoform 1 |
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1.1.3.2.1.2 |
MafF, isoform 2 |
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1.1.3.2.2 |
MafG |
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1.1.3.2.3 |
MafK |
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1.1.4 |
Family: B-ATF-related factors |
TGAGTCA |
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1.1.4.0.1 |
B-ATF |
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1.1.4.0.2 |
B-ATF-2 |
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1.1.4.0.2.1 |
B-ATF-2, isoform 1 |
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1.1.4.0.2.2 |
B-ATF-2, isoform 2 |
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1.1.4.0.3 |
B-ATF-3 |
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1.1.5 |
Family: XBP-1-related factors |
GGATGACGTGTACA |
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1.1.5.0.1 |
XBP-1 |
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1.1.5.0.1.1 |
XBP-1U |
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1.1.5.0.1.2 |
XBP-1S |
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1.1.6 |
Family: ATF-4-related factors |
TGACGTCA |
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1.1.6.0.1 |
ATF-4 |
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1.1.6.0.2 |
ATF-5 |
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1.1.7 |
Family: CREB-related factors |
TGACGTCA |
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1.1.7.1 |
Subfamily: CREB-like factors |
TGACGTCA |
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1.1.7.1.1 |
CREB (CREB1) |
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1.1.7.1.1.1 |
CREB-A |
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1.1.7.1.1.2 |
CREB-B |
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1.1.7.1.1.3 |
htCREB, isoform 3 |
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1.1.7.1.2 |
ATF-1 |
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1.1.7.1.2.1 |
ATF-1, isoform 1 |
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1.1.7.1.2.2 |
ATF-1, isoform 2 |
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1.1.7.1.3 |
CREM |
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1.1.7.1.3.1 |
CREM, isoform 1 (CREM-BCEFGγHIβ |
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1.1.7.1.3.2 |
CREM-β, isoform 2 (CREM-BCEFGHIβ) |
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1.1.7.1.3.3 |
CREM-τ, isoform 3 (CREM-BCEFGIα) |
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1.1.7.1.3.4 |
CREM-γ, isoform 4 (CREM-BEFHIb) |
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1.1.7.1.3.5 |
CREM-ϑ2τ-γ, isoform 5 (CREM-ϑ2EFGHIb) |
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1.1.7.1.3.6 |
ICER-I, isoform 6 (IcerγHIα) |
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1.1.7.1.3.7 |
ICER-Iγ, isoform 7 (IcerHIα) |
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1.1.7.1.3.8 |
ICER-II, isoform 8 (IcerγHIβ) |
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1.1.7.1.3.9 |
ICER-IIγ, isoform 9 (IcerHIβ) |
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1.1.7.1.3.10 |
CREM-ϑ1τ2β, isoform 10 (CREM-ϑ1EFGHIβ) |
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1.1.7.1.3.11 |
CREM-ϑ1β, isoform 11 (CREM-ϑ1EFHIβ) |
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1.1.7.1.3.12 |
CREM-ϑ2β, isoform 12 (CREM-ϑ2EFHIb) |
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1.1.7.1.3.13 |
CREM, isoform 13 (CREM-BEFGγHIβ) |
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1.1.7.1.3.14 |
CREM-τ2γ, isoform 14 (CREM-BEFGHIβ) |
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1.1.7.1.3.15 |
CREM, isoform 15 (CREM-BGHIβ) |
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1.1.7.1.3.16 |
CREM-ΔC-G, isoform 16 (CREM-BγHIβ) |
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1.1.7.1.3.17 |
CREM, isoform 17 (CREM-BHIβ) |
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1.1.7.1.3.18 |
CREM, isoform 18 (CREM-BHIα) |
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1.1.7.1.3.19 |
CREM-ϑ1τ2γ, isoform 19 (CREM-ϑ1EFGγHIβ) |
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1.1.7.1.3.20 |
CREM, isoform 20 |
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1.1.7.1.3.21 |
CREM, isoform 21 |
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1.1.7.1.3.22 |
CREM, isoform 22 |
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1.1.7.1.3.23 |
CREM, isoform 23 |
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1.1.7.1.3.24 |
CREM, isoform 24 |
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1.1.7.1.3.25 |
CREM, isoform 25 |
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1.1.7.1.3.26 |
CREM, isoform 26 |
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1.1.7.1.3.27 |
CREM, isoform 27 |
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1.1.7.1.3.28 |
CREM, isoform 28 |
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1.1.7.1.3.29 |
CREM, isoform 29 |
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1.1.7.2 |
Subfamily: CREB-3-like factors |
TGACGTCA |
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1.1.7.2.1 |
CREB-3 (Luman) |
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F |
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1.1.7.2.1.1 |
CREB-3, isoform 1 |
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1.1.7.2.1.2 |
LZIP, isoform 2 (UP: isof. 1) |
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1.1.7.2.1.3 |
sLZIP, isoform 3 (UP: isof. 2) |
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1.1.7.2.2 |
CREB-3L1 (OASIS) |
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1.1.7.2.2.1 |
CREB-3L1, isoform 1 |
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1.1.7.2.2.2 |
CREB-3L1, isoform 2 |
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1.1.7.2.3 |
CREB-3L2 |
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1.1.7.2.3.1 |
CREB-3L2, isoform 1 |
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1.1.7.2.3.2 |
CREB-3L2, isoform 2 |
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1.1.7.2.3.3 |
CREB-3L2, isoform 3 |
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1.1.7.2.4 |
CREB-3L3 (CREB-H) |
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1.1.7.2.4.1 |
CREB-3L3, isoform 1 |
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1.1.7.2.4.2 |
CREB-3L3, isoform 2 |
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1.1.7.2.4.3 |
CREB-3L3, isoform 3 |
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1.1.7.2.4.4 |
CREB-3L3, isoform 4 |
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1.1.7.2.5 |
CREB-3L4 |
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1.1.7.2.5.1 |
CREB-3L4, isoform 1 |
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1.1.7.2.5.2 |
CREB-3L4, isoform 2 |
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1.1.7.3 |
Subfamily: ATF-6 factors |
TGACGTGG |
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1.1.7.3.1 |
ATF-6α |
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1.1.7.3.2 |
ATF-6β |
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1.1.7.3.2.1 |
ATF-6β, isoform 1 |
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1.1.7.3.2.2 |
ATF-6β, isoform 2 |
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|
|
| |
1.1.7.4 |
Subfamily: CREBZF-like factors |
TGACGTCA |
|
| |
1.1.7.4.1 |
CREBZF (Zhangfei, ZF) |
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|
| |
1.1.7.5 |
Subfamily: CREBL2-like factors |
TGACGTCA |
|
| |
1.1.7.5.1 |
CREBL2 |
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|
| |
1.1.8 |
Family: C/EBP-related |
ATTGCGCAAT |
|
| |
1.1.8.1 |
Subfamily: C/EBP |
ATTGCGCAAT |
|
| |
1.1.8.1.1 |
C/EBPα |
|
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|
|
|
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|
| |
1.1.8.1.1.1 |
C/EBPα, isoform 1 |
|
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|
| |
1.1.8.1.1.2 |
C/EBPα, isoform 2 |
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| |
1.1.8.1.1.3 |
C/EBPα, isoform 3 |
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|
| |
1.1.8.1.1.4 |
C/EBPα, isoform 4 |
|
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| |
1.1.8.1.2 |
C/EBPβ (NF-IL6-1) |
 |
|
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|
| |
1.1.8.1.2.1 |
C/EBPβ, isoform 1 (C/EBPβ-FL) |
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|
| |
1.1.8.1.2.2 |
C/EBPβ, isoform 2 (C/EBPβ-LAP) |
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|
| |
1.1.8.1.2.3 |
C/EBPβ, isoform 3 (C/EBPβ-LIP) |
|
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|
| |
1.1.8.1.3 |
C/EBPγ |
 |
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| |
1.1.8.1.4 |
C/EBPδ |
 |
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| |
1.1.8.1.5 |
C/EBPε |
 |
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| |
1.1.8.1.6 |
DDIT3 (CHOP-10) |
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| |
1.1.8.1.6.1 |
DDIT3, isoform 1 |
|
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| |
1.1.8.1.6.2 |
DDIT3, isoform 2 |
|
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|
| |
1.1.8.2 |
Subfamily: PAR factors |
TTATGCAA |
|
| |
1.1.8.2.1 |
DBP |
 |
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|
| |
1.1.8.2.2 |
HLF |
 |
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|
| |
1.1.8.2.2.1 |
HLF, isoform 1 |
|
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|
| |
1.1.8.2.2.2 |
HLF, isoform 2 |
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|
| |
1.1.8.2.3 |
TEF |
 |
|
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|
| |
1.1.8.2.3.1 |
TEF, isoform 1 |
|
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|
|
| |
1.1.8.2.3.2 |
TEF, isoform 2 |
|
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|
|
| |
1.1.8.2.4 |
NF-IL3 (E4BP4) |
 |
|
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|
| |
1.1.8.3 |
Subfamily: CREBRF-like factors |
|
|
| |
1.1.8.3.1 |
CREBRF |
|
|
|
|
|
|
|
| |
1.1.8.3.1.1 |
CREBRF, isoform 1 |
|
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|
| |
1.1.8.3.1.2 |
CREBRF, isoform 1 |
|
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|
|
| |
1.1.8.3.1.3 |
CREBRF, isoform 1 |
|
|
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|
| |
1.1.0 |
Family: ZIP only |
|
|
| |
1.1.0.1 |
Subfamily: TSC22 |
|
|
| |
1.1.0.1.1 |
TSC22D1 (TSC-22, Cerebral protein 2) |
|
|
|
|
|
|
|
| |
1.1.0.1.1.1 |
TSC22D1, isoform 1 |
|
|
|
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|
| |
1.1.0.1.1.2 |
TSC22D1, isoform 2 |
|
|
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|
| |
1.1.0.1.1.3 |
TSC22D1, isoform 3 |
|
|
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|
| |
1.1.0.1.1.4 |
TSC22D1, isoform 4 |
|
|
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|
| |
1.1.0.1.2 |
TSC22D2 (TILZ4) |
|
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|
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|
| |
1.1.0.1.2.1 |
TSC22D2, isoform 1 (TILZ4a, TILZ4c) |
|
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|
| |
1.1.0.1.2.2 |
TSC22D2, isoform 2 (TILZ4b) |
|
|
|
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|
| |
1.1.0.1.3 |
TSC22D3 (DSIPI, GILZ) |
|
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|
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|
| |
1.1.0.1.3.1 |
TSC22D3, isoform 1 |
|
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|
| |
1.1.0.1.3.2 |
TSC22D3, isoform 2 |
|
|
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|
| |
1.1.0.1.3.3 |
TSC22D3, isoform 3 |
|
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|
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|
| |
1.1.0.1.4 |
TSC22D4 (TILZ2) |
|
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|
| |
1.1.0.1.4.1 |
TSC22D4, isoform 1 |
|
|
|
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|
| |
1.1.0.1.4.2 |
TSC22D4, isoform 2 |
|
|
|
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|
| |
1.1.0.2 |
Subfamily: UTF |
|
|
| |
1.1.0.2.1 |
UTF1 |
|
|
|
|
|
|
|
| |
1.2 |
Class: Basic helix-loop-helix factors (bHLH) |
|
|
|
| |
1.2.1 |
Family: E2A-related factors |
CAGGTG |
|
| |
1.2.1.0.1 |
E2A (TCF-3, ITF-1) |
 |
|
|
|
|
|
|
| |
1.2.1.0.1.1 |
E12 (PAN-2) |
|
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|
| |
1.2.1.0.1.2 |
E47 (PAN-1) |
|
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|
| |
1.2.1.0.1.3 |
ITF-1 |
|
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|
| |
1.2.1.0.2 |
SEF2 (E2-2, TCF-4, ITF-2) |
 |
|
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|
| |
1.2.1.0.2.1 |
SEF2-1B (B−) |
|
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|
| |
1.2.1.0.2.2 |
SEF2-1A (A+) |
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|
| |
1.2.1.0.2.3 |
SEF2-1D (B+) |
|
|
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|
| |
1.2.1.0.2.4 |
SEF2, isoform B+δ |
|
|
|
|
|
| |
1.2.1.0.2.5 |
SEF2, isoform B−δ |
|
|
|
|
|
| |
1.2.1.0.2.6 |
SEF2, isoform A− |
|
|
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|
| |
1.2.1.0.2.7 |
SEF2, isoform G− |
|
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|
| |
1.2.1.0.2.8 |
SEF2, isoform H− |
|
|
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|
| |
1.2.1.0.2.9 |
SEF2, isoform D− |
|
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|
| |
1.2.1.0.2.10 |
SEF2, isoform F− |
|
|
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|
| |
1.2.1.0.2.11 |
SEF2, isoform 11 |
|
|
|
|
|
| |
1.2.1.0.2.12 |
SEF2, isoform E− |
|
|
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|
|
| |
1.2.1.0.2.13 |
SEF2, isoform 13 |
|
|
|
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|
| |
1.2.1.0.2.14 |
SEF2, isoform C− |
|
|
|
|
|
| |
1.2.1.0.2.15 |
SEF2, isoform C−δ |
|
|
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|
| |
1.2.1.0.2.16 |
SEF2, isoform I− |
|
|
|
|
|
| |
1.2.1.0.3 |
HTF-4 (TCF-12, HEB) |
|
|
|
|
|
|
|
| |
1.2.1.0.3.1 |
HTF-4a, isoform 1 |
|
|
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|
| |
1.2.1.0.3.2 |
HTF-4b, isoform 2 |
|
|
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|
| |
1.2.1.0.3.3 |
HTF-4c, isoform 3 |
|
|
|
|
|
| |
1.2.1.0.3.4 |
HTF-4c, isoform 4 |
|
|
|
|
|
| |
1.2.2 |
Family: MyoD / ASC-related factors |
CAGGTG |
|
| |
1.2.2.1 |
Subfamily: Myogenic transcription factors |
|
|
| |
1.2.2.1.1 |
MyoD |
|
|
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|
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|
| |
1.2.2.1.2 |
Myogenin (Myf-4) |
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|
| |
1.2.2.1.3 |
Myf-5 |
|
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|
| |
1.2.2.1.4 |
Myf-6 (MRF4) |
 |
|
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|
| |
1.2.2.2 |
Subfamily: Achaete-Scute-like factors |
|
|
| |
1.2.2.2.1 |
ASH-1 (ASCL1) |
|
|
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|
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|
| |
1.2.2.2.2 |
ASH-2 (ASCL2) |
 |
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|
| |
1.2.2.2.3 |
ASH-3 (ASCL3) |
|
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|
| |
1.2.2.2.4 |
ASH-4 (ASCL4) |
|
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|
| |
1.2.2.2.5 |
ASH-5 (ASCL5) |
|
|
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|
|
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|
| |
1.2.3 |
Family: Tal-related factors |
CAGCTG |
|
| |
1.2.3.1 |
Subfamily: Tal / HEN-like factors |
CAGCTG |
|
| |
1.2.3.1.1 |
Tal-1 (SCL, TCL-5) |
|
|
|
|
|
|
|
| |
1.2.3.1.1.1 |
PP42-Tal-1 |
|
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|
| |
1.2.3.1.1.2 |
PP39-Tal-1 |
|
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|
| |
1.2.3.1.1.3 |
PP22-Tal-1 |
|
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|
| |
1.2.3.1.2 |
Tal-2 |
|
|
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|
| |
1.2.3.1.3 |
Lyl-1 |
|
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|
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|
| |
1.2.3.1.4 |
HEN1 (NSCL-1, NHLH1) |
 |
|
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|
| |
1.2.3.1.5 |
HEN2 (NSCL-2, NHLH2) |
|
|
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|
| |
1.2.3.2 |
Subfamily: Twist-like factors |
CGTCTG |
|
| |
1.2.3.2.1 |
Twist-1 (H-Twist, M-Twist) |
|
|
|
|
|
|
|
| |
1.2.3.2.2 |
Twist-2 (Dermo-1) |
|
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|
| |
1.2.3.2.3 |
HAND-1 (eHAND, Th1) |
|
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|
| |
1.2.3.2.4 |
HAND-2 (dHAND) |
|
|
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|
|
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|
| |
1.2.3.2.4.1 |
HAND-2, isoform 1 |
|
|
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|
| |
1.2.3.2.4.2 |
HAND-2, isoform 2 |
|
|
|
|
|
| |
1.2.3.2.5 |
bHLH-EC2 (TCF-15) |
|
|
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|
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|
| |
1.2.3.2.6 |
Scx |
|
|
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|
| |
1.2.3.2.7 |
PTF-1a |
|
|
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|
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|
| |
1.2.3.2.8 |
FIGα |
 |
|
|
|
|
|
|
| |
1.2.3.3 |
Subfamily: Mesp-like factors |
|
|
| |
1.2.3.3.1 |
Mesp-1 |
 |
|
|
|
|
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|
| |
1.2.3.3.2 |
Mesp-2 |
|
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|
| |
1.2.3.3.3 |
TCF-23 |
|
|
|
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|
| |
1.2.3.3.4 |
ABF-1 (Musculin, MyoR, MSC) |
 |
|
|
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|
| |
1.2.3.3.5 |
Pod-1 (TCF-21) |
 |
|
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|
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|
| |
1.2.3.3.6 |
Mesogenin-1 (MSGN1) |
|
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|
| |
1.2.3.3.7 |
TCF-24 |
|
|
|
|
|
|
|
| |
1.2.3.4 |
Subfamily: Neurogenin / Atonal-like factors |
CAGCTG |
|
| |
1.2.3.4.1 |
NeuroD1 |
|
|
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|
|
|
|
| |
1.2.3.4.2 |
NeuroD2 |
 |
|
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|
| |
1.2.3.4.3 |
NeuroD4 (ATH-3) |
|
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|
| |
1.2.3.4.4 |
NeuroD6 (ATH-2) |
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|
| |
1.2.3.4.5 |
NGN-1 (NeuroD3) |
|
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|
| |
1.2.3.4.6 |
NGN-2 (Atoh4, NeuroG2) |
 |
|
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|
| |
1.2.3.4.7 |
NGN-3 (Atoh5, NeuroG3) |
|
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|
| |
1.2.3.4.8 |
ATH-1 (ATOH-1) |
 |
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|
| |
1.2.3.4.9 |
ATH-5 (ATOH-7) |
|
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|
| |
1.2.3.4.10 |
ATH-6 (ATOH-8) |
|
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|
|
|
|
| |
1.2.3.4.10.1 |
ATH-6, isoform 1 |
|
|
|
|
|
| |
1.2.3.4.10.2 |
ATH-6, isoform 2 |
|
|
|
|
|
| |
1.2.3.4.11 |
bHLHe22 (Beta3) |
 |
|
|
|
|
|
|
| |
1.2.3.4.12 |
bHLHe23 |
 |
|
|
|
|
|
|
| |
1.2.3.4.13 |
OLIGO1 |
 |
|
|
|
|
|
|
| |
1.2.3.4.14 |
OLIGO2 |
 |
|
|
|
|
|
|
| |
1.2.3.4.15 |
OLIGO3 |
 |
|
|
|
|
|
|
| |
1.2.3.4.16 |
MIST1 (bHLHa15) |
 |
|
|
|
|
|
|
| |
1.2.3.4.17 |
Fer3L (Ferd3L) |
|
|
|
|
|
|
|
| |
1.2.3.5 |
Subfamily: bHLHa9-like factors |
|
|
| |
1.2.3.5.1 |
bHLHa9 |
|
|
|
|
|
|
|
| |
1.2.4 |
Family: Hairy-related factors |
CACGAG |
|
| |
1.2.4.1 |
Subfamily: Hairy-like factors |
CACGAG |
|
| |
1.2.4.1.1 |
HES-1 |
|
|
|
|
|
|
|
| |
1.2.4.1.2 |
HES-2 |
|
|
|
|
|
|
|
| |
1.2.4.1.2.1 |
HES-2, isoform 1 |
|
|
|
|
|
| |
1.2.4.1.2.2 |
HES-2, isoform 2 |
|
|
|
|
|
| |
1.2.4.1.3 |
HES-3 |
|
|
|
|
|
|
|
| |
1.2.4.1.4 |
HES-4 |
|
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|
| |
1.2.4.1.5 |
HES-5 |
 |
|
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|
| |
1.2.4.1.6 |
HES-6 |
|
|
|
|
|
|
|
| |
1.2.4.1.6.1 |
HES-6, isoform 1 |
|
|
|
|
|
| |
1.2.4.1.6.2 |
HES-6, isoform 2 |
|
|
|
|
|
| |
1.2.4.1.6.3 |
HES-6, isoform 3 |
|
|
|
|
|
| |
1.2.4.1.6.4 |
HES-6, isoform 4 |
|
|
|
|
|
| |
1.2.4.1.7 |
HES-7 |
|
|
|
|
|
|
|
| |
1.2.4.1.7.1 |
HES-7, isoform 1 |
|
|
|
|
|
| |
1.2.4.1.7.2 |
HES-7, isoform 2 |
|
|
|
|
|
| |
1.2.4.1.8 |
HEY-1 |
 |
|
|
|
|
|
|
| |
1.2.4.1.8.1 |
HEY-1, isoform 1 |
|
|
|
|
|
| |
1.2.4.1.8.2 |
HEY-1, isoform 2 |
|
|
|
|
|
| |
1.2.4.1.9 |
HEY-2 |
 |
|
|
|
|
|
|
| |
1.2.4.1.10 |
HEYL |
|
|
|
|
|
|
|
| |
1.2.4.1.11 |
HELT |
|
|
|
|
|
|
|
| |
1.2.4.1.11.1 |
HELT, isoform 1 |
|
|
|
|
|
| |
1.2.4.1.11.2 |
HELT, isoform 2 |
|
|
|
|
|
| |
1.2.4.1.12 |
DEC1 (STRA-13, bHLHb2, bHLHe40) |
 |
|
|
|
|
|
|
| |
1.2.4.1.13 |
DEC2 (bHLHb3, bHLHe41) |
 |
|
|
|
|
|
|
| |
1.2.5 |
Family: PAS domain factors |
CACGC |
|
| |
1.2.5.1 |
Subfamily: Ahr-like factors |
CACGC |
|
| |
1.2.5.1.1 |
AhR |
|
|
|
|
|
|
|
| |
1.2.5.1.2 |
AhRR |
|
|
|
|
|
|
|
| |
1.2.5.1.2.1 |
AhRR, isoform 1 |
|
|
|
|
|
| |
1.2.5.1.2.2 |
AhRR, isoform 2 |
|
|
|
|
|
| |
1.2.5.1.2.3 |
AhRR, isoform 3 |
|
|
|
|
|
| |
1.2.5.1.3 |
SIM1 |
|
|
|
|
|
|
|
| |
1.2.5.1.4 |
SIM2 |
|
|
|
|
|
|
|
| |
1.2.5.1.4.1 |
SIM2, isoform 1 |
|
|
|
|
|
| |
1.2.5.1.4.2 |
SIM2, isoform 2 |
|
|
|
|
|
| |
1.2.5.1.5 |
HIF-1α |
|
|
|
|
|
|
|
| |
1.2.5.1.5.1 |
HIF-1α, isoform 1 |
|
|
|
|
|
| |
1.2.5.1.5.2 |
HIF-1α, isoform 2 |
|
|
|
|
|
| |
1.2.5.1.5.3 |
HIF-1α, isoform 3 (I.3) |
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| |
1.2.5.1.6 |
HIF-3α |
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|
| |
1.2.5.1.6.1 |
HIF-3α, isoform 1 |
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| |
1.2.5.1.6.2 |
HIF-3α, isoform 2 |
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| |
1.2.5.1.6.3 |
HIF-3α, isoform 3 |
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| |
1.2.5.1.6.4 |
HIF-3α, isoform 4 |
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| |
1.2.5.1.6.5 |
HIF-3α, isoform 5 |
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| |
1.2.5.1.6.6 |
HIF-3α, isoform 6 |
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| |
1.2.5.1.6.7 |
HIF-3α, isoform 7 |
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| |
1.2.5.1.7 |
EPAS-1 |
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| |
1.2.5.1.8 |
NPAS-1 |
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|
| |
1.2.5.1.8.1 |
NPAS-1, isoform 1 |
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| |
1.2.5.1.8.2 |
NPAS-1, isoform 2 |
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| |
1.2.5.1.9 |
NPAS-3 |
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F |
|
| |
1.2.5.1.9.1 |
NPAS-3, isoform 1 (long form) |
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| |
1.2.5.1.9.2 |
NPAS-3, isoform 2 |
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| |
1.2.5.1.9.3 |
NPAS-3, isoform 3 (NPAS3v) |
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| |
1.2.5.1.9.4 |
NPAS-3, isoform 4 |
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1.2.5.1.9.5 |
NPAS-3, isoform 5 |
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| |
1.2.5.1.9.6 |
NPAS-3, isoform 6 |
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| |
1.2.5.2 |
Subfamily: Arnt-like factors |
CACGTG |
|
| |
1.2.5.2.1 |
Arnt (HIF-1β) |
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| |
1.2.5.2.1.1 |
Arnt long, isoform 1 |
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| |
1.2.5.2.1.2 |
Arnt short, isoform 2 |
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| |
1.2.5.2.1.3 |
Arnt, isoform 3 |
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| |
1.2.5.2.1.4 |
Arnt, isoform 4 |
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| |
1.2.5.2.2 |
Arnt-2 |
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| |
1.2.5.2.2.1 |
Arnt-2, isoform 1 |
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| |
1.2.5.2.2.2 |
Arnt-2, isoform 2 |
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|
| |
1.2.5.2.3 |
ArntL (BMAL1) |
 |
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| |
1.2.5.2.3.1 |
BMAL1A |
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| |
1.2.5.2.3.2 |
BMAL1B |
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| |
1.2.5.2.3.3 |
BMAL1C |
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| |
1.2.5.2.3.4 |
BMAL1D |
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| |
1.2.5.2.3.5 |
BMAL1E |
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| |
1.2.5.2.3.6 |
BMAL1F |
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| |
1.2.5.2.3.7 |
MOP3 |
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| |
1.2.5.2.3.8 |
BMAL1 / ArntL isoform 8 |
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| |
1.2.5.2.3.9 |
BMAL1 / ArntL isoform 9 |
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|
| |
1.2.5.2.4 |
ArntL2 (BMAL2) |
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| |
1.2.5.2.4.1 |
BMAL2a |
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| |
1.2.5.2.4.2 |
BMAL2b |
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| |
1.2.5.2.4.3 |
BMAL2c |
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| |
1.2.5.2.4.4 |
BMAL2d |
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| |
1.2.5.2.4.5 |
CLIF, isoform 5 |
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| |
1.2.5.2.4.6 |
BMAL2, isoform 6 |
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| |
1.2.5.2.4.7 |
MOP9 long form, isoform 7 |
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| |
1.2.5.2.4.8 |
MOP9 short form, isoform 8 |
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| |
1.2.5.2.4.9 |
MOP9 short form, isoform 9 |
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| |
1.2.5.2.5 |
CLOCK |
 |
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| |
1.2.5.2.6 |
NPAS-2 |
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|
| |
1.2.5.3 |
Subfamily: NCoA factors |
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|
| |
1.2.5.3.1 |
NCoA-1 (SRC-1) |
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|
| |
1.2.5.3.1.1 |
SRC-1A |
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| |
1.2.5.3.1.2 |
SRC-1E |
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| |
1.2.5.3.1.3 |
SRC-1Q |
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| |
1.2.5.3.2 |
NCoA-2 |
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|
| |
1.2.5.3.3 |
NCoA-3 |
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|
| |
1.2.5.3.3.1 |
NCoA-3, isoform 1 |
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| |
1.2.5.3.3.2 |
NCoA-3, isoform 2 |
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| |
1.2.5.3.3.3 |
NCoA-3, isoform 3 |
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| |
1.2.5.3.3.4 |
NCoA-3, isoform 4 |
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| |
1.2.5.3.3.5 |
NCoA-3, isoform 5 |
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| |
1.2.5.4 |
Subfamily: NPAS-4 |
CACGA |
|
| |
1.2.5.4.1 |
NPAS-4 |
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|
| |
1.2.5.4.1.1 |
NPAS-4, isoform 1 |
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| |
1.2.5.4.1.2 |
NPAS-4, isoform 2 |
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|
| |
1.2.5.5 |
Subfamily: SOHLH-like factors |
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|
| |
1.2.5.5.1 |
SOHLH1 (TEB2) |
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|
| |
1.2.5.5.1.1 |
SOHLH1, isoform 1 |
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| |
1.2.5.5.1.2 |
SOHLH1, isoform 2 |
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|
| |
1.2.5.5.2 |
SOHLH2 (TEB1) |
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|
| |
1.2.5.5.2.1 |
SOHLH2, isoform 1 |
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| |
1.2.5.5.2.2 |
SOHLH2, isoform 2 |
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| |
1.2.5.5.2.3 |
SOHLH2, isoform 3 |
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|
| |
1.2.5.5.3 |
TCFL5 (Cha, E2BP-1) |
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|
F |
|
| |
1.2.5.5.3.1 |
TCFL5, isoform 1 |
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| |
1.2.5.5.3.2 |
TCFL5, isoform 2 |
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| |
1.2.5.5.3.3 |
TCFL5, isoform 3 |
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|
| |
1.2.6 |
Family: bHLH-ZIP factors |
CACATG |
|
| |
1.2.6.1 |
Subfamily: TFE3-like factors |
CACATG |
|
| |
1.2.6.1.1 |
TFE3 |
 |
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|
| |
1.2.6.1.1.1 |
TFE3, isoform 1 |
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| |
1.2.6.1.1.2 |
TFE3, isoform 2 |
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| |
1.2.6.1.2 |
TFEB |
 |
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| |
1.2.6.1.2.1 |
TFEB, isoform 1 |
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| |
1.2.6.1.2.2 |
TFEB, isoform 2 |
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| |
1.2.6.1.3 |
TFEC |
 |
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| |
1.2.6.1.3.1 |
TFEC, isoform 1 |
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| |
1.2.6.1.3.2 |
TFEC, isoform 2 |
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| |
1.2.6.1.3.3 |
TFEC, isoform 3 |
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| |
1.2.6.1.3.4 |
TFEC, isoform 4 |
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| |
1.2.6.1.4 |
MiTF |
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|
| |
1.2.6.1.4.1 |
MiTF, isoform A1 |
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| |
1.2.6.1.4.2 |
MiTF, isoform A2 |
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|
| |
1.2.6.1.4.3 |
MiTF, isoform B1 |
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| |
1.2.6.1.4.4 |
MiTF, isoform B2 |
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| |
1.2.6.1.4.5 |
MiTF, isoform C1 |
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| |
1.2.6.1.4.6 |
MiTF, isoform C2 |
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| |
1.2.6.1.4.7 |
MiTF, isoform H1 |
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| |
1.2.6.1.4.8 |
MiTF, isoform H2 |
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|
| |
1.2.6.1.4.9 |
MiTF, isoform M1 |
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| |
1.2.6.1.4.10 |
MiTF, isoform M2 |
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| |
1.2.6.1.4.11 |
MiTF, isoform Mdel |
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| |
1.2.6.1.4.12 |
MiTF, isoform 12 |
|
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|
| |
1.2.6.2 |
Subfamily: USF factors |
CACGTG |
|
| |
1.2.6.2.1 |
USF-1 |
 |
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|
| |
1.2.6.2.1.1 |
USF-1, isoform 1 |
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|
| |
1.2.6.2.1.2 |
USF-1, isoform 2 (usf1-bd) |
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|
| |
1.2.6.2.2 |
USF-2 |
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| |
1.2.6.2.2.1 |
USF-2A |
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| |
1.2.6.2.2.2 |
USF-2AΔH |
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| |
1.2.6.2.2.3 |
USF-2B |
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| |
1.2.6.2.2.4 |
USF-2C |
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| |
1.2.6.2.3 |
USF-3 |
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|
| |
1.2.6.2.3.1 |
USF-3, isoform 1 |
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| |
1.2.6.2.3.2 |
USF-3, isoform 2 |
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|
| |
1.2.6.3 |
Subfamily: SREBP factors |
ATCACCCCAC |
|
| |
1.2.6.3.1 |
SREBP-1 (SREBF1) |
 |
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|
| |
1.2.6.3.1.1 |
SREBP-1A |
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| |
1.2.6.3.1.2 |
SREBP-1B |
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| |
1.2.6.3.1.3 |
SREBP-1C |
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|
| |
1.2.6.3.1.4 |
SREBP-1, isoform 4 |
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| |
1.2.6.3.1.5 |
SREBP-1, isoform 5 (SREBP-1aΔ) |
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| |
1.2.6.3.1.6 |
SREBP-1, isoform 6 (SREBP-1cΔ) |
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| |
1.2.6.3.2 |
SREBP-2 (SREBF2) |
 |
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|
| |
1.2.6.3.2.1 |
SREBP-2, isoform 1 |
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| |
1.2.6.3.2.2 |
SREBP-2, isoform 2 |
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| |
1.2.6.4 |
Subfamily: AP-4 |
CAGCTG |
|
| |
1.2.6.4.1 |
AP-4 |
 |
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|
| |
1.2.6.5 |
Subfamily: Myc / Max factors |
CACGTG |
|
| |
1.2.6.5.1 |
c-Myc |
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|
| |
1.2.6.5.1.1 |
c-Myc, isoform 1 |
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| |
1.2.6.5.1.2 |
c-Myc, isoform 2 |
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| |
1.2.6.5.2 |
N-Myc |
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| |
1.2.6.5.3 |
L-Myc-1 |
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|
| |
1.2.6.5.3.1 |
L-Myc-1, isoform 1 |
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| |
1.2.6.5.3.2 |
L-Myc-1, isoform 2 (Short) |
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| |
1.2.6.5.3.3 |
L-Myc-1, isoform 3 |
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| |
1.2.6.5.4 |
L-Myc-2 (MYCLP1) |
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| |
1.2.6.5.5 |
Max |
 |
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| |
1.2.6.5.5.1 |
Max Long, isoform 1 |
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| |
1.2.6.5.5.2 |
Max Short, isoform 2 |
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| |
1.2.6.5.5.3 |
ΔMax, isoform 3 |
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| |
1.2.6.5.5.4 |
Max, isoform 4 |
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| |
1.2.6.5.5.5 |
Max, isoform 5 |
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| |
1.2.6.5.5.6 |
Max, isoform 6 |
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|
| |
1.2.6.6 |
Subfamily: Mondo-like factors |
CACGTG |
|
| |
1.2.6.6.1 |
Mlx |
 |
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| |
1.2.6.6.1.1 |
Mlxα |
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| |
1.2.6.6.1.2 |
Mlxβ |
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| |
1.2.6.6.1.3 |
Mlxγ |
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|
| |
1.2.6.6.2 |
MondoA (Mlx-IP) |
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|
| |
1.2.6.6.2.1 |
Mlx-IP, isoform 1 |
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| |
1.2.6.6.2.2 |
Mlx-IP, isoform 2 |
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| |
1.2.6.6.2.3 |
Mlx-IP, isoform 3 |
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| |
1.2.6.6.2.4 |
Mlx-IP, isoform 4 |
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| |
1.2.6.6.2.5 |
Mlx-IP, isoform 5 |
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| |
1.2.6.6.3 |
MondoB (Mlx-IPL, WS-bHLH) |
 |
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|
| |
1.2.6.6.3.1 |
WS-bHLHα, isoform 1 |
|
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|
| |
1.2.6.6.3.2 |
WS-bHLHβ, isoform 2 |
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| |
1.2.6.6.3.3 |
WS-bHLHγ, isoform 3 |
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| |
1.2.6.6.3.4 |
WS-bHLHδ, isoform 4 |
|
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|
| |
1.2.6.6.3.5 |
WS-bHLHε, isoform 5 |
|
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|
| |
1.2.6.6.3.6 |
WS-bHLH, isoform 6 |
|
|
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|
| |
1.2.6.7 |
Subfamily: Mad1-like factors |
CACGTG |
|
| |
1.2.6.7.1 |
Mad1 (MXD1) |
|
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|
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|
| |
1.2.6.7.1.1 |
Mad1, isoform 1 |
|
|
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|
| |
1.2.6.7.1.2 |
Mad1, isoform 2 |
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|
| |
1.2.6.7.2 |
Mad3 (MXD3) |
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|
| |
1.2.6.7.2.1 |
Mad3, isoform 1 |
|
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|
| |
1.2.6.7.2.2 |
Mad3, isoform 2 |
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|
| |
1.2.6.7.2.3 |
Mad3, isoform 3 |
|
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|
| |
1.2.6.7.3 |
Mad4 (MXD4) |
|
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|
| |
1.2.6.7.5 |
Mxi-1 |
|
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|
| |
1.2.6.7.5.1 |
Mxi-1, isoform 1 |
|
|
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|
| |
1.2.6.7.5.2 |
Mxi-1, isoform 2 |
|
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|
| |
1.2.6.7.5.3 |
Mxi-1, isoform 3 |
|
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|
| |
1.2.6.7.5.4 |
Mxi-1, isoform 4 |
|
|
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|
| |
1.2.6.7.6 |
Mnt |
 |
|
|
|
|
F |
|
| |
1.2.6.8 |
Subfamily: Mad5-like factors |
CACGTG |
|
| |
1.2.6.8.1 |
Mad5 (MGA) = 6.5.5.0.2 |
|
|
|
|
|
|
|
| |
1.2.6.8.1.1 |
Mad5, isoform 1 |
|
|
|
|
|
| |
1.2.6.8.1.2 |
Mad5, isoform 2 |
|
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|
| |
1.2.6.8.1.3 |
Mad5, isoform 3 |
|
|
|
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|
| |
1.2.6.8.1.4 |
Mad5, isoform 4 |
|
|
|
|
|
| |
1.2.8 |
Family: HLH domain only |
|
|
| |
1.2.8.0.1 |
Id1 |
|
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|
|
|
|
|
| |
1.2.8.0.1.1 |
Id1a |
|
|
|
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|
| |
1.2.8.0.1.2 |
Id1b |
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|
| |
1.2.8.0.2 |
Id2 |
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|
| |
1.2.8.0.3 |
Id3 |
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|
| |
1.2.8.0.4 |
Id4 |
 |
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1.3 |
Class: Basic helix-span-helix factors (bHSH) |
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| |
1.3.1 |
Family: AP-2 |
GCCTGAGGC |
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| |
1.3.1.0.1 |
AP-2α |
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| |
1.3.1.0.1.1 |
AP-2αA, isoform 1 |
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1.3.1.0.1.2 |
AP-2α, isoform 2 |
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1.3.1.0.1.4 |
AP-2αB, isoform 4 |
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1.3.1.0.1.5 |
AP-2α, isoform 5 |
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1.3.1.0.2 |
AP-2β |
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1.3.1.0.2.1 |
AP-2β, isoform 1 |
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1.3.1.0.2.2 |
AP-2β, isoform 2 |
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1.3.1.0.3 |
AP-2γ |
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| |
1.3.1.0.3.1 |
AP-2γ, isoform 1 |
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1.3.1.0.3.2 |
AP-2γ, isoform 2 |
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1.3.1.0.4 |
AP-2δ |
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1.3.1.0.5 |
AP-2ε |
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| 2 |
Superclass: Zinc-coordinating DNA-binding domains |
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2.1 |
Class: Nuclear receptors with C4 zinc fingers |
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| |
2.1.1 |
Family: Steroid hormone receptors (NR3) |
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| |
2.1.1.1 |
Subfamily: GR-like receptors (NR3C) |
AGAACATGATGTTCT |
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| |
2.1.1.1.1 |
Glucocorticoid receptor (GR) (NR3C1) |
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2.1.1.1.1.1 |
GRα, isoform α |
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2.1.1.1.1.2 |
GRβ, isoform β |
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2.1.1.1.1.3 |
GRα2, isoform α2 |
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2.1.1.1.1.4 |
GRβ2, isoform β2 |
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2.1.1.1.1.5 |
GR-Aα |
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2.1.1.1.1.6 |
GR-Aβ |
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2.1.1.1.1.7 |
GR-P |
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2.1.1.1.1.8 |
GRαB, isoform αB |
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2.1.1.1.1.9 |
GRβB, isoform βB |
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2.1.1.1.1.10 |
GRΔ313-338, isoform 10 |
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2.1.1.1.1.11 |
GRαC1, isoform αC1 |
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2.1.1.1.1.12 |
GRαC2, isoform αC2 |
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2.1.1.1.1.13 |
GRαC3, isoform αC3 |
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2.1.1.1.1.14 |
GRαD1, isoform αD1 |
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2.1.1.1.1.15 |
GRαD2, isoform αD2 |
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| |
2.1.1.1.1.16 |
GRαD3, isoform αD3 |
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| |
2.1.1.1.2 |
Mineralocorticoid receptor (MR) (NR3C2) |
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| |
2.1.1.1.2.1 |
MR, isoform 1 |
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| |
2.1.1.1.2.2 |
MR, isoform 2 |
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2.1.1.1.2.3 |
MR, isoform 3 |
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2.1.1.1.2.4 |
MR-δ, isoform 4 |
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| |
2.1.1.1.3 |
Progesterone receptor (PR) (NR3C3) |
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| |
2.1.1.1.3.1 |
PR, isoform A |
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| |
2.1.1.1.3.2 |
PR, isoform B |
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2.1.1.1.3.3 |
PR, isoform 3 |
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| |
2.1.1.1.3.4 |
PR, isoform 4 (PR-M) |
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2.1.1.1.3.5 |
PR, isoform 5 (δ4) |
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| |
2.1.1.1.4 |
Androgen receptor (AR) (NR3C4) |
 |
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| |
2.1.1.1.4.1 |
AR-A, isoform 2 |
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| |
2.1.1.1.4.2 |
AR-B, isoform 1 |
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| |
2.1.1.1.4.3 |
AR3, isoform 3 |
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| |
2.1.1.1.4.4 |
AR4, isoform 4 |
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| |
2.1.1.2 |
Subfamily: ER-like receptors (NR3A&B) |
AGGTCACAGTGACCT |
|
| |
2.1.1.2.1 |
Estrogen receptor α (ERα) (ESR1, NR3A1) |
 |
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| |
2.1.1.2.1.1 |
ERα long, isoform 1 |
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| |
2.1.1.2.1.2 |
ERα short, isoform 2 |
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2.1.1.2.1.3 |
ERα46, isoform 3 |
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| |
2.1.1.2.1.4 |
ERα36, isoform 4 |
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| |
2.1.1.2.2 |
Estrogen receptor β (ERβ) (NR3A2) |
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| |
2.1.1.2.2.1 |
ERβ1, isoform 1 |
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| |
2.1.1.2.2.2 |
ERβ2, isoform 2 |
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| |
2.1.1.2.2.3 |
ERβ2A, isoform 3 |
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| |
2.1.1.2.2.4 |
ERβ3, isoform 4 |
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| |
2.1.1.2.2.5 |
ERβ4, isoform 5 |
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| |
2.1.1.2.2.6 |
ERβ5, isoform 6 |
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| |
2.1.1.2.2.7 |
ERβ5A, isoform 7 |
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| |
2.1.1.2.2.8 |
ERβ6, isoform 8 |
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| |
2.1.1.2.2.9 |
ERβ, isoform 9 |
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| |
2.1.1.2.3 |
ERR1 (ERRα, ESRRA) (NR3B1) |
 |
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| |
2.1.1.2.3.1 |
ERR1, isoform 1 |
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| |
2.1.1.2.3.2 |
ERR1, isoform 2 |
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| |
2.1.1.2.4 |
ERR2 (ERRβ, ESRRB) (NR3B2) |
 |
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| |
2.1.1.2.4.1 |
ERRβ2δ10, isoform 1 |
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| |
2.1.1.2.4.2 |
ERRβ, isoform 2 |
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| |
2.1.1.2.4.3 |
ERRβshort, isoform 3 |
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| |
2.1.1.2.5 |
ERR3 (ERRγ, ESRRG) (NR3B3) |
 |
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| |
2.1.1.2.5.1 |
ERR3, isoform 1 |
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| |
2.1.1.2.5.2 |
ERR3, isoform 2 |
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| |
2.1.1.2.5.3 |
ERR3, isoform 3 |
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| |
2.1.1.2.5.4 |
ERR3, isoform 4 |
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| |
2.1.1.2.5.5 |
ERR3, isoform 5 |
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| |
2.1.2 |
Family: Thyroid hormone receptor-related factors (NR1) |
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|
| |
2.1.2.1 |
Subfamily: Retinoic acid receptors (NR1B) |
TGACCTTTGACCT |
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| |
2.1.2.1.1 |
RAR-α (NR1B1) |
 |
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| |
2.1.2.1.1.1 |
RAR-α1 |
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2.1.2.1.1.2 |
RAR-α2 |
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| |
2.1.2.1.1.3 |
RAR-α1-ΔBC |
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| |
2.1.2.1.2 |
RAR-β (NR1B2) |
 |
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| |
2.1.2.1.2.1 |
RAR-β1 |
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| |
2.1.2.1.2.2 |
RAR-β2 |
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| |
2.1.2.1.2.3 |
RAR-β3 |
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| |
2.1.2.1.2.4 |
RAR-β4 |
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| |
2.1.2.1.3 |
RAR-γ (NR1B3) |
 |
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| |
2.1.2.1.3.1 |
RAR-γ, isoform 1 |
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| |
2.1.2.1.3.2 |
RAR-γ, isoform 2 |
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| |
2.1.2.1.3.3 |
RAR-γ, isoform 3 |
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| |
2.1.2.1.3.4 |
RAR-γ, isoform 4 |
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| |
2.1.2.2 |
Subfamily: Thyroid hormone receptors (NR1A) |
TGACCTGAAATGACCT |
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| |
2.1.2.2.1 |
T3R-α (THRA) (NR1A1) |
 |
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| |
2.1.2.2.1.1 |
T3R-α1 |
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2.1.2.2.1.2 |
T3R-α2 |
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| |
2.1.2.2.1.3 |
T3R-α3 |
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| |
2.1.2.2.1.4 |
T3R-α4 |
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| |
2.1.2.2.2 |
T3R-β (NR1A2) |
 |
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| |
2.1.2.2.2.1 |
T3R-β1 |
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| |
2.1.2.2.2.2 |
T3R-β2 |
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| |
2.1.2.3 |
Subfamily: Rev-ErbA (NR1D) |
TGACCTAGTGACCT |
|
| |
2.1.2.3.1 |
Rev-ErbAα (NR1D1) |
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| |
2.1.2.3.2 |
Rev-ErbAβ (NR1D2) |
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| |
2.1.2.4 |
Subfamily: Vitamin D receptor (NR1I) |
TGACCTTCGTGACCT |
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| |
2.1.2.4.1 |
VDR (NR1I1) |
 |
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| |
2.1.2.4.1.1 |
VDR, isoform 1 |
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2.1.2.4.1.2 |
VDR, isoform 2 |
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2.1.2.4.2 |
PXR (NR1I2) |
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| |
2.1.2.4.2.1 |
PRR1-A |
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2.1.2.4.2.2 |
PRR1-B |
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2.1.2.4.2.3 |
PRR1-C |
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2.1.2.4.2.4 |
PRR2-A |
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2.1.2.4.2.5 |
PRR2-B |
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2.1.2.4.2.6 |
PRR2-C |
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2.1.2.4.2.7 |
PRR3 |
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| |
2.1.2.4.3 |
CAR (NR1I3) |
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| |
2.1.2.4.3.1 |
CAR, isoform 1 |
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| |
2.1.2.4.3.2 |
CAR, isoform 2 |
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2.1.2.4.3.3 |
CAR, isoform 3 |
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2.1.2.4.3.4 |
CAR, isoform 4 |
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2.1.2.4.3.5 |
CAR, isoform 5 |
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2.1.2.4.3.6 |
CAR, isoform 6 |
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2.1.2.4.3.7 |
CAR, isoform 7 |
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| |
2.1.2.4.3.8 |
CAR, isoform 8 |
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| |
2.1.2.4.3.9 |
CAR, isoform 9 |
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| |
2.1.2.4.3.10 |
CAR, isoform 10 |
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| |
2.1.2.4.3.11 |
CAR, isoform 11 |
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| |
2.1.2.4.3.12 |
CAR, isoform 12 |
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2.1.2.4.3.13 |
CAR, isoform 13 |
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2.1.2.4.3.14 |
CAR, isoform 14 |
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2.1.2.4.3.15 |
CAR, isoform 15 |
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| |
2.1.2.5 |
Subfamily: PPAR (NR1C) |
TGACCTTTGACCT |
|
| |
2.1.2.5.1 |
PPARα (NR1C1) |
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| |
2.1.2.5.1.1 |
PPARα, isoform 1 |
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| |
2.1.2.5.1.2 |
PPARα, isoform 2 |
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| |
2.1.2.5.2 |
PPARβ (PPARδ) (NR1C2) |
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| |
2.1.2.5.2.1 |
PPARβ, isoform 1 |
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| |
2.1.2.5.2.2 |
PPARβ, isoform 2 |
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| |
2.1.2.5.2.3 |
PPARβ, isoform 3 |
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| |
2.1.2.5.2.4 |
PPARβ, isoform 4 |
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| |
2.1.2.5.3 |
PPARγ (NR1C3) |
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| |
2.1.2.5.3.1 |
PPARγ1(wt), isoform 1 |
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| |
2.1.2.5.3.2 |
PPARγ2, isoform 2 |
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| |
2.1.2.5.3.3 |
PPARγ1(tr), isoform 3 |
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| |
2.1.2.6 |
Subfamily: ROR (NR1F) |
TGACCTACTTAT |
|
| |
2.1.2.6.1 |
RORα (NR1F1) |
 |
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|
F |
|
| |
2.1.2.6.1.1 |
RORα1 |
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| |
2.1.2.6.1.2 |
RORα2 |
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| |
2.1.2.6.1.3 |
RORα3 |
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| |
2.1.2.6.1.4 |
RORα4 |
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| |
2.1.2.6.2 |
RORβ (NR1F2) |
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| |
2.1.2.6.2.1 |
RORβ, isoform 1 |
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| |
2.1.2.6.2.2 |
RORβ, isoform 2 |
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| |
2.1.2.6.3 |
RORγ (NR1F3) |
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| |
2.1.2.6.3.1 |
RORγ, isoform 1 |
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| |
2.1.2.6.3.2 |
RORγ, isoform 2 |
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| |
2.1.2.7 |
Subfamily: LXR (NR1H) |
TGACCTCTACTGACCT |
|
| |
2.1.2.7.1 |
LXRα (NR1H3) |
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| |
2.1.2.7.1.1 |
LXRα, isoform 1 |
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| |
2.1.2.7.1.2 |
LXRα, isoform 2 |
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| |
2.1.2.7.1.3 |
LXRα, isoform 3 |
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|
| |
2.1.2.7.2 |
LXRβ (NR1H2) |
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| |
2.1.2.7.2.1 |
LXRβ, isoform 1 |
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| |
| |
2.1.2.7.2.2 |
LXRβ, isoform 2 |
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| |
| |
2.1.2.7.3 |
FXR (NR1H4) |
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| |
2.1.2.7.3.1 |
FXR, isoform 1 |
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| |
2.1.2.7.3.2 |
FXR, isoform 2 |
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| |
2.1.2.7.3.3 |
FXR, isoform 3 |
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| |
2.1.2.7.3.4 |
FXR, isoform 4 |
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| |
2.1.2.7.3.5 |
FXR, isoform 5 |
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| |
2.1.3 |
Family: RXR-related receptors (NR2) |
(TGACCT) |
|
| |
2.1.3.1 |
Subfamily: Retinoid X receptors (NR2B) |
(TGACCT) |
|
| |
2.1.3.1.1 |
RXRα (NR2B1) |
 |
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|
| |
2.1.3.1.1.1 |
RXRα, isoform 1 |
|
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| |
2.1.3.1.1.2 |
RXRα, isoform 2 |
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|
| |
2.1.3.1.2 |
RXRβ (NR2B2) |
 |
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|
F |
|
| |
2.1.3.1.2.1 |
RXRβ, isoform 1 |
|
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|
| |
2.1.3.1.2.2 |
RXRβ, isoform 2 |
|
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| |
2.1.3.1.3 |
RXRγ (NR2B3) |
 |
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|
| |
2.1.3.2 |
Subfamily: HNF-4 (NR2A) |
AGTCCAAAGTTCA |
|
| |
2.1.3.2.1 |
HNF-4α (NR2A1) |
 |
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|
| |
2.1.3.2.1.1 |
HNF-4α1 |
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| |
2.1.3.2.1.2 |
HNF-4α2 |
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|
| |
2.1.3.2.1.3 |
HNF-4α3 |
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2.1.3.2.1.4 |
HNF-4α4 |
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| |
2.1.3.2.1.5 |
HNF-4α7 |
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| |
2.1.3.2.1.6 |
HNF-4α8 |
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2.1.3.2.1.7 |
HNF-4α9 |
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| |
2.1.3.2.2 |
HNF-4γ (NR2A2) |
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| |
2.1.3.2.2.1 |
HNF-4γ, isoform 1 |
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| |
2.1.3.2.2.2 |
HNF-4γ, isoform 2 |
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| |
2.1.3.3 |
Subfamily: Tailless-like receptors (NR2E) |
TGACCTTTGACCT |
|
| |
2.1.3.3.1 |
Tlx (NR2E1) |
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| |
2.1.3.3.1.1 |
Tlx, isoform 1 |
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| |
2.1.3.3.1.2 |
Tlx, isoform 2 |
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| |
2.1.3.3.2 |
PNR (NR2E3) |
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| |
2.1.3.3.2.1 |
PNR, isoform long |
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| |
2.1.3.3.2.2 |
PNR, isoform short |
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| |
2.1.3.4 |
Subfamily: Testicular receptors (NR2C) |
TGACCTCTGACCT |
|
| |
2.1.3.4.1 |
TR2 (NR2C1) |
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2.1.3.4.1.1 |
TR2-11, isoform 1 |
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2.1.3.4.1.2 |
TR2-9, isoform 2 |
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2.1.3.4.1.3 |
TR2-7, isoform 3 |
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2.1.3.4.2 |
TR4 (NR2C2) |
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2.1.3.4.2.1 |
TR4, isoform 1 |
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2.1.3.4.2.2 |
TR4, isoform 2 |
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2.1.3.5 |
Subfamily: COUP-like receptors (NR2F) |
TGACCTTTGACCT |
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| |
2.1.3.5.1 |
COUP-TFI (NR2F1) |
 |
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| |
2.1.3.5.2 |
COUP-TFII (NR2F2) |
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| |
2.1.3.5.2.1 |
COUP-TFII, isoform 1 |
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2.1.3.5.2.2 |
COUP-TFII, isoform 2 |
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| |
2.1.3.5.2.3 |
COUP-TFII, isoform 3 |
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2.1.3.5.3 |
EAR2 (NR2F6) |
 |
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| |
2.1.4 |
Family: NGFI-B-related receptors (NR4) |
TGACCTTT |
|
| |
2.1.4.0.1 |
NGFI-B (NR4A1) |
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| |
2.1.4.0.1.1 |
NGFI-B, isoform 1 |
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| |
2.1.4.0.1.2 |
NGFI-B, isoform 2 |
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2.1.4.0.1.3 |
NGFI-B, isoform 3 |
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| |
2.1.4.0.2 |
NURR1 (NR4A2) |
 |
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| |
2.1.4.0.2.1 |
NURR1, isoform 1 |
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| |
2.1.4.0.2.2 |
NURR1, isoform 2 |
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| |
2.1.4.0.3 |
NOR1 (NR4A3) |
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| |
2.1.4.0.3.1 |
NOR1, isoform α |
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| |
2.1.4.0.3.2 |
NOR1, isoform β |
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| |
2.1.4.0.3.3 |
NOR1, isoform 3 |
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|
| |
2.1.5 |
Family: FTZ-F1-related receptors (NR5) |
TGACCTTG |
|
| |
2.1.5.0.1 |
FTZ-F1 (SF-1) (NR5A1) |
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| |
2.1.5.0.2 |
LRH-1 (NR5A2) |
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| |
2.1.5.0.2.1 |
LRH-1, isoform 1 |
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| |
2.1.5.0.2.2 |
LRH-1, isoform 2 |
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| |
2.1.5.0.2.3 |
LRH-1, isoform 3 |
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| |
2.1.5.0.2.4 |
LRH-1, isoform 4 |
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| |
2.1.6 |
Family: GCNF-related receptors (NR6) |
TGAACTTGACTTGA |
|
| |
2.1.6.0.1 |
GCNF (NR6A1) |
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F |
|
| |
2.1.6.0.1.1 |
GCNF-2, isoform 1 |
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| |
2.1.6.0.1.2 |
GCNF-1, isoform 2 |
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| |
2.1.6.0.1.3 |
GCNF, isoform 3 |
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| |
2.1.6.0.1.4 |
GCNF, isoform 4 |
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| |
2.1.6.0.1.5 |
GCNF, isoform 5 |
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|
| |
2.1.7 |
Family: DAX-related receptors (NR0) |
TGACCTT |
|
| |
2.1.7.0.1 |
DAX1 (NR0B1) |
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|
| |
2.1.7.0.1.1 |
DAX1, isoform 1 |
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| |
2.1.7.0.1.2 |
DAX1, isoform 2 |
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| |
2.1.7.0.2 |
SHP (NR0B2) |
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|
| |
2.2 |
Class: Other C4 zinc finger-type factors |
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|
| |
2.2.1 |
Family: GATA-type zinc fingers |
|
|
| |
2.2.1.1 |
Subfamily: Two zinc-finger GATA factors |
AGATAA |
|
| |
2.2.1.1.1 |
GATA-1 (GF-1, EryF1, NF-E1) |
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|
| |
2.2.1.1.1.1 |
GATA-1, isoform 1 |
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|
| |
2.2.1.1.1.2 |
GATA-1, isoform 2 |
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|
| |
2.2.1.1.1.3 |
GATA-1s, isoform 3 |
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| |
2.2.1.1.2 |
GATA-2 |
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|
| |
2.2.1.1.2.1 |
GATA-2, isoform 1 |
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| |
2.2.1.1.2.2 |
GATA-2, isoform 2 |
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| |
2.2.1.1.3 |
GATA-3 |
 |
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|
| |
2.2.1.1.3.1 |
GATA-3, isoform 1 |
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| |
2.2.1.1.3.2 |
GATA-3, isoform 2 |
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|
| |
2.2.1.1.4 |
GATA-4 |
 |
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|
| |
2.2.1.1.4.1 |
GATA-4, isoform 1 |
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| |
2.2.1.1.4.2 |
GATA-4, isoform 2 |
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| |
2.2.1.1.5 |
GATA-5 |
 |
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| |
2.2.1.1.6 |
GATA-6 |
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|
| |
2.2.1.1.6.1 |
GATA-6, isoform 1 |
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| |
2.2.1.1.6.2 |
GATA-6, isoform 2 |
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|
| |
2.2.1.2 |
Subfamily: Single GATA-type zinc-finger |
AGATAA |
|
| |
2.2.1.2.1 |
GATAD1 (ODAG) |
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| |
2.2.1.2.2 |
p66-α (GATAD2A) |
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| |
2.2.1.2.2.1 |
p66-α, isoform 1 |
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| |
2.2.1.2.2.2 |
p66-α, isoform 2 |
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| |
2.2.1.2.2.3 |
p66-α, isoform 3 |
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| |
2.2.1.2.3 |
p66-β (GATAD2B) |
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| |
2.2.1.2.4 |
RERE (ARG, ARP, ATN1L) = 3.5.1.3.7 |
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| |
2.2.1.2.4.1 |
RERE, isoform 1 |
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| |
2.2.1.2.4.2 |
RERE, isoform 2 |
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| |
2.2.1.2.5 |
MTA1 = 3.5.1.3.4 |
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| |
2.2.1.2.5.1 |
MTA1, isoform 1 (MTA1l) |
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| |
2.2.1.2.5.2 |
MTA1, isoform 2 (MTA1s) |
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| |
2.2.1.2.5.3 |
MTA1, isoform 3 |
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| |
2.2.1.2.6 |
MTA2 (MTA1L1, PID) = 3.5.1.3.5 |
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| |
2.2.1.2.6.1 |
MTA2, isoform 1 |
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| |
2.2.1.2.6.2 |
MTA2, isoform 2 |
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| |
2.2.1.2.7 |
MTA3 = 3.5.1.3.6 |
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F |
|
| |
2.2.1.2.7.1 |
MTA3, isoform 1 |
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| |
2.2.1.2.7.2 |
MTA3, isoform 2 |
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| |
2.2.1.2.8 |
ZGLP1 (GLP-1) |
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|
| |
2.2.1.2.9 |
DNMT3A |
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| |
2.2.1.2.9.1 |
DNMT3A, isoform 1 |
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| |
2.2.1.2.9.2 |
DNMT3A, isoform 2 |
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| |
2.2.1.2.9.3 |
DNMT3A, isoform 3 |
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| |
2.2.1.2.10 |
DNMT3B |
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|
| |
2.2.1.2.10.1 |
DNMT3B, isoform 1 |
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| |
2.2.1.2.10.2 |
DNMT3B, isoform 2 |
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| |
2.2.1.2.10.3 |
DNMT3B, isoform 3 |
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| |
2.2.1.2.10.4 |
DNMT3B, isoform 4 |
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| |
2.2.1.2.10.5 |
DNMT3B, isoform 5 |
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| |
2.2.1.2.10.6 |
DNMT3B, isoform 6 |
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| |
2.2.1.2.10.7 |
DNMT3B, isoform 7 |
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| |
2.2.1.2.10.8 |
DNMT3B, isoform 8 |
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| |
2.2.1.2.11 |
DNMT3L |
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|
| |
2.2.1.2.11.1 |
DNMT3L, isoform 1 |
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| |
2.2.1.2.11.2 |
DNMT3L, isoform 2 |
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|
| |
2.2.1.2.12 |
ATRX (RAD54L, XH2) |
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|
| |
2.2.1.2.12.1 |
ATRX, isoform 1 |
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| |
2.2.1.2.12.2 |
ATRX, isoform 2 |
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| |
2.2.1.2.12.3 |
ATRX, isoform 3 |
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| |
2.2.1.2.12.4 |
ATRX, isoform 4 |
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| |
2.2.1.2.12.5 |
ATRX, isoform 5 |
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| |
2.2.1.2.12.6 |
ATRX, isoform 6 |
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|
| |
2.2.1.2.13 |
TRPS1 (GC79) = 2.3.4.0.20 |
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|
| |
2.2.1.2.13.1 |
TRPS1, isoform 1 |
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| |
2.2.1.2.13.2 |
TRPS1, isoform 2 |
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|
| |
2.2.1.2.13.3 |
TRPS1, isoform 3 |
|
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|
| |
2.3 |
Class: C2H2 zinc finger factors |
|
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|
| |
2.3.1 |
Family: Three-zinc finger Krüppel-related factors |
|
|
| |
2.3.1.1 |
Subfamily: Sp1-like factors |
GGGGCGGGG |
|
| |
2.3.1.1.1 |
Sp1 |
 |
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|
| |
2.3.1.1.1.1 |
Sp1, isoform 1 (Sp1a) |
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| |
2.3.1.1.1.2 |
Sp1, isoform 2 (Sp1b) |
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| |
2.3.1.1.1.3 |
Sp1, isoform 3 (Sp1c) |
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|
| |
2.3.1.1.2 |
Sp2 |
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|
| |
2.3.1.1.2.1 |
Sp2, isoform 1 |
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| |
2.3.1.1.2.2 |
Sp2, isoform 2 |
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|
| |
2.3.1.1.3 |
Sp3 |
 |
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|
F |
|
| |
2.3.1.1.3.1 |
Sp3, isoform 1 (L-Sp3) |
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| |
2.3.1.1.3.2 |
Sp3, isoform 2 |
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|
| |
2.3.1.1.3.3 |
Sp3, isoform 3 (M1-Sp3) |
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| |
2.3.1.1.3.4 |
Sp3, isoform 4 (M2-Sp3) |
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| |
2.3.1.1.3.5 |
Sp3, isoform 5 |
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|
| |
2.3.1.1.3.6 |
Sp3, isoform 6 |
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| |
2.3.1.1.4 |
Sp4 |
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| |
2.3.1.1.5 |
Sp5 |
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| |
2.3.1.1.6 |
Sp6 |
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|
| |
2.3.1.1.7 |
Sp7 (OSX) |
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|
| |
2.3.1.1.7.1 |
Sp7, isoform 1 (Sp7α, long) |
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|
| |
2.3.1.1.7.2 |
Sp7, isoform 2 (Sp7β, short) |
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|
| |
2.3.1.1.8 |
Sp8 |
 |
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|
| |
2.3.1.1.8.1 |
Sp8, isoform 1 |
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|
| |
2.3.1.1.8.2 |
Sp8, isoform 2 |
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|
| |
2.3.1.1.8.3 |
Sp8, isoform 3 |
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| |
2.3.1.1.8.4 |
Sp8, isoform 4 |
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|
| |
2.3.1.1.9 |
Sp9 |
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|
| |
2.3.1.2 |
Subfamily: Krüppel-like factors |
CCACACCCT |
|
| |
2.3.1.2.1 |
KLF1 (EKLF) |
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| |
2.3.1.2.2 |
KLF2 (LKLF) |
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|
| |
2.3.1.2.3 |
KLF3 (BKLF) |
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|
| |
2.3.1.2.3.1 |
KLF3, isoform 1 |
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|
| |
2.3.1.2.3.2 |
KLF3, isoform 2 |
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|
| |
2.3.1.2.4 |
KLF4 (GKLF) |
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|
| |
2.3.1.2.4.1 |
KLF4, isoform 1 |
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|
| |
2.3.1.2.4.2 |
KLF4, isoform 2 |
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| |
2.3.1.2.4.3 |
KLF4, isoform 3 |
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|
| |
2.3.1.2.4.4 |
KLF4, isoform 4 |
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|
| |
2.3.1.2.4.5 |
KLF4, isoform 5 |
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|
| |
2.3.1.2.5 |
KLF5 (CKLF, IKLF, BTEB2) |
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|
| |
2.3.1.2.5.1 |
KLF5, isoform 1 |
|
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|
| |
2.3.1.2.5.2 |
KLF5, isoform 2 |
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| |
2.3.1.2.5.3 |
KLF5, isoform 3 |
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|
| |
2.3.1.2.5.4 |
KLF5, isoform 4 |
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|
| |
2.3.1.2.6 |
KLF6 (CPBP, BCD1) |
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|
| |
2.3.1.2.6.1 |
KLF6, isoform 1 |
|
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|
| |
2.3.1.2.6.2 |
KLF6, isoform 2 |
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| |
2.3.1.2.6.3 |
KLF6, isoform 3 |
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|
| |
2.3.1.2.7 |
KLF7 (UKLF) |
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|
F |
|
| |
2.3.1.2.7.1 |
KLF7, isoform 1 |
|
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|
| |
2.3.1.2.7.2 |
KLF7, isoform 2 |
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| |
2.3.1.2.7.3 |
KLF7, isoform 3 |
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|
| |
2.3.1.2.7.4 |
KLF7, isoform 4 |
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|
| |
2.3.1.2.7.5 |
KLF7, isoform 5 |
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|
| |
2.3.1.2.7.6 |
KLF7, isoform 6 |
|
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|
| |
2.3.1.2.8 |
KLF8 (BKLF) |
|
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|
| |
2.3.1.2.8.1 |
KLF8, isoform 1 |
|
|
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| |
2.3.1.2.8.2 |
KLF8, isoform 2 |
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| |
2.3.1.2.8.3 |
KLF8, isoform 3 |
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| |
2.3.1.2.8.4 |
KLF8, isoform 4 |
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| |
2.3.1.2.9 |
KLF9 (BTEB1) |
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| |
2.3.1.2.10 |
KLF10 (TIEG1) |
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| |
2.3.1.2.10.1 |
KLF10, isoform 1 |
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| |
2.3.1.2.10.2 |
KLF10, isoform 2 |
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| |
2.3.1.2.10.3 |
KLF10, isoform 3 |
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| |
2.3.1.2.10.4 |
KLF10, isoform 4 |
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| |
2.3.1.2.11 |
KLF11 (FKLF, TIEG2) |
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| |
2.3.1.2.11.1 |
KLF11, isoform 1 |
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| |
2.3.1.2.11.2 |
KLF11, isoform 2 |
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| |
2.3.1.2.12 |
KLF12 (AP-2rep) |
 |
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| |
2.3.1.2.12.1 |
KLF12, isoform 1 |
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| |
2.3.1.2.12.2 |
KLF12, isoform 2 |
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| |
2.3.1.2.12.3 |
KLF12, isoform 3 |
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| |
2.3.1.2.13 |
KLF13 (BTEB3, NSLP1) |
 |
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| |
2.3.1.2.14 |
KLF14 (BTEB5) |
 |
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| |
2.3.1.2.15 |
KLF15 (KKLF) |
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2.3.1.2.16 |
KLF16 (BTEB4, NSLP2) |
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2.3.1.2.17 |
KLF17 |
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| |
2.3.1.3 |
Subfamily: EGR factors |
GCGTGGGCG |
|
| |
2.3.1.3.1 |
EGR1 (Krox-24, Zif268) |
 |
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| |
2.3.1.3.2 |
EGR2 (Krox-20) |
 |
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| |
2.3.1.3.2.1 |
EGR2, isoform long |
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| |
2.3.1.3.2.2 |
EGR2, isoform short |
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| |
2.3.1.3.3 |
EGR3 (PILOT) |
 |
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| |
2.3.1.3.3.1 |
EGR3, isoform 1 |
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| |
2.3.1.3.3.2 |
EGR3, isoform 2 |
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| |
2.3.1.3.4 |
EGR4 |
 |
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| |
2.3.2 |
Family: Other factors with up to three adjacent zinc fingers |
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| |
2.3.2.1 |
Subfamily: Factors with 2-3 adjacent zinc fingers
and a BTB/POZ domain |
TCCTGCTA |
|
| |
2.3.2.1.1 |
ZBTB5 [2] |
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| |
2.3.2.1.2 |
ZBTB8B [2] |
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| |
2.3.2.1.2.1 |
ZBTB8B, isoform 1 |
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| |
2.3.2.1.2.2 |
ZBTB8B, isoform 2 |
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| |
2.3.2.1.6 |
ZBTB22 (ZNF297, BING1) [3] |
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| |
2.3.2.1.7 |
ZBTB32 (ZNF538, FAZF) [3] |
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| |
2.3.2.1.8 |
ZBTB34 [3] |
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| |
2.3.2.1.9 |
ZBTB37 [3] |
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| |
2.3.2.1.9.1 |
ZBTB37, isoform 1 |
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| |
2.3.2.1.9.2 |
ZBTB37, isoform 2 |
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| |
2.3.2.1.9.3 |
ZBTB37, isoform 3 |
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| |
2.3.2.1.10 |
ZBTB43 (ZBTB22B, ZNF297B) [3] |
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| |
2.3.2.1.11 |
ZBTB46 (BTBD4, ZNF340) [2] |
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| |
2.3.2.1.12 |
ZBTB33 (KAISO, ZNF348) [3] |
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|
| |
2.3.2.2 |
Subfamily: Factors with 2-3 adjacent zinc fingers
and a KRAB domain |
|
|
| |
2.3.2.2.1 |
ZNF487 [3] |
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| |
2.3.2.2.1.1 |
ZNF487, isoform 1 |
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| |
2.3.2.2.1.2 |
ZNF487, isoform 2 |
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| |
2.3.2.2.2 |
ZNF542 (ZNF542P) [2] |
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|
| |
2.3.2.2.2.1 |
ZNF542, isoform 1 |
|
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|
| |
2.3.2.2.2.2 |
ZNF542, isoform 2 |
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|
| |
2.3.2.2.3 |
ZNF705A [3] |
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|
| |
2.3.2.3 |
Subfamily: Factors with 2-3 adjacent zinc fingers
and a SCAN domain |
|
|
| |
2.3.2.3.1 |
ZSCAN1 [3] |
|
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|
| |
2.3.2.3.1.1 |
ZSCAN1, isoform 1 |
|
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|
| |
2.3.2.3.1.2 |
ZSCAN1, isoform 2 |
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|
| |
2.3.2.3.2 |
ZNF174 (AW-1, ZSCAN8) [3] |
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|
| |
2.3.2.3.2.1 |
ZNF174, isoform 1 |
|
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|
| |
2.3.2.3.2.2 |
ZNF174, isoform 2 |
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|
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|
| |
2.3.2.3.3 |
ZNF396 (ZSCAN14) [3] |
|
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|
| |
2.3.2.3.3.1 |
ZNF396, isoform 1 |
|
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|
| |
2.3.2.3.3.2 |
ZNF396, isoform 2 |
|
|
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|
| |
2.3.2.3.3.3 |
ZNF396, isoform 3 |
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|
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|
| |
2.3.2.3.4 |
ZNF446 (ZKSCAN20) [3] |
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|
| |
2.3.2.3.4.1 |
ZNF446, isoform 1 |
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|
| |
2.3.2.3.4.2 |
ZNF446, isoform 2 |
|
|
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|
| |
2.3.2.4 |
Subfamily: Other three adjacent zinc finger factors |
|
|
| |
2.3.2.4.1 |
ZNF414 [3] |
|
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|
| |
2.3.2.4.1.1 |
ZNF414, isoform 1 |
|
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|
| |
2.3.2.4.1.2 |
ZNF414, isoform 2 |
|
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|
| |
2.3.2.4.2 |
ZNF511 [3] |
|
|
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|
| |
2.3.2.4.2.1 |
ZNF511, isoform 1 |
|
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|
| |
2.3.2.4.2.2 |
ZNF511, isoform 2 |
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|
| |
2.3.2.4.3 |
ZNF580 [3] |
|
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|
| |
2.3.2.4.4 |
ZNF702P [3] |
|
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|
| |
2.3.2.4.5 |
ZNF740 (ZFP740) [3] |
 |
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|
| |
2.3.2.4.6 |
ZFPM2 (ZNF89B, FOG2) = 2.7.2.0.2 [3] |
|
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|
|
F |
|
| |
2.3.2.4.6.1 |
ZFPM2, isoform 1 |
|
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|
| |
2.3.2.4.6.2 |
ZFPM2, isoform 2 |
|
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|
| |
2.3.2.4.7 |
OSR1 (ODD) [3] |
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|
| |
2.3.2.4.8 |
OVOL3 (OVL2L) [4] |
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|
F, ? |
|
| |
2.3.2.4.9 |
AEBP2 [2] |
|
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|
| |
2.3.2.4.9.1 |
AEBP2, isoform 1 |
|
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|
| |
2.3.2.4.9.2 |
AEBP2, isoform 2 |
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|
| |
2.3.2.4.9.3 |
AEBP2, isoform 3 |
|
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|
| |
2.3.3 |
Family: More than 3 adjacent zinc finger factors |
|
|
| |
2.3.3.1 |
Subfamily: GLI-like factors |
TGGGTGGTC |
|
| |
2.3.3.1.1 |
GLI1 [5] |
|
|
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|
| |
2.3.3.1.1.1 |
GLI1, isoform 1 |
|
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|
| |
2.3.3.1.1.2 |
GLI1, isoform 2 |
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|
| |
2.3.3.1.1.3 |
GLI1, isoform 3 |
|
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|
| |
2.3.3.1.2 |
GLI2 [5] |
 |
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|
| |
2.3.3.1.2.1 |
GLI2, isoform α |
|
|
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|
| |
2.3.3.1.2.2 |
GLI2, isoform β |
|
|
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|
| |
2.3.3.1.2.3 |
GLI2, isoform γ |
|
|
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|
| |
2.3.3.1.2.4 |
GLI2, isoform δ |
|
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|
| |
2.3.3.1.2.5 |
GLI2, isoform 5 |
|
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|
| |
2.3.3.1.3 |
GLI3 [5] |
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|
| |
2.3.3.1.4 |
GLIS1 [5] |
 |
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|
| |
2.3.3.1.5 |
GLIS2 (NKL) [5] |
 |
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|
| |
2.3.3.1.6 |
GLIS3 (ZNF515) [5] |
 |
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|
| |
2.3.3.1.6.1 |
GLIS3, isoform 1 |
|
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|
| |
2.3.3.1.6.2 |
GLIS3, isoform 2 |
|
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|
| |
2.3.3.1.7 |
ZIC1 (ZNF201) [5] |
 |
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|
| |
2.3.3.1.8 |
ZIC2 [5] |
|
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|
| |
2.3.3.1.9 |
ZIC3 (ZNF203) [5] |
 |
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|
| |
2.3.3.1.9.1 |
ZIC3A, isoform 1 |
|
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|
| |
2.3.3.1.9.2 |
ZIC3B, isoform 2 |
|
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|
| |
2.3.3.1.10 |
ZIC4 [5] |
 |
|
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|
|
F |
|
| |
2.3.3.1.10.1 |
ZIC4, isoform 1 |
|
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|
| |
2.3.3.1.10.2 |
ZIC4, isoform 2 |
|
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|
| |
2.3.3.1.10.3 |
ZIC4, isoform 3 |
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|
| |
2.3.3.1.10.4 |
ZIC4, isoform 4 |
|
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|
| |
2.3.3.1.10.5 |
ZIC4, isoform 5 |
|
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|
| |
2.3.3.1.11 |
ZIC5 [4] |
|
|
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|
| |
2.3.3.2 |
Subfamily: Snail-like factors |
CACCTG |
|
| |
2.3.3.2.1 |
SNAI1 [4] |
|
|
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|
| |
2.3.3.2.2 |
SNAI2 (SLUG) [5] |
 |
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|
| |
2.3.3.2.3 |
SNAI3 (ZNF293) [5] |
|
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|
| |
2.3.3.2.4 |
SCRT1 [5] |
 |
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|
| |
2.3.3.2.5 |
SCRT2 [5] |
 |
|
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|
| |
2.3.3.3 |
Subfamily: ZFP91-like factors |
|
|
| |
2.3.3.3.1 |
ZFP91 (ZNF757) [5] |
|
|
|
|
|
|
|
| |
2.3.3.3.1.1 |
ZFP91, isoform 1 |
|
|
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|
| |
2.3.3.3.1.2 |
ZFP91, isoform 2 |
|
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|
| |
2.3.3.3.2 |
ZNF692 [5] |
|
|
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|
|
|
|
| |
2.3.3.3.2.1 |
ZNF692, isoform 1 |
|
|
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|
| |
2.3.3.3.2.2 |
ZNF692, isoform 2 |
|
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|
| |
2.3.3.3.2.3 |
ZNF692, isoform 3 |
|
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|
| |
2.3.3.3.2.4 |
ZNF692, isoform 4 |
|
|
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|
| |
2.3.3.3.2.5 |
ZNF692, isoform 5 |
|
|
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|
|
| |
2.3.3.3.3 |
ZNF276 (ZFP276, ZNF477) [5] |
|
|
|
|
|
|
|
| |
2.3.3.3.3.1 |
ZNF276, isoform 1 |
|
|
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|
| |
2.3.3.3.3.2 |
ZNF276, isoform 2 |
|
|
|
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|
| |
2.3.3.3.4 |
ZNF653 (ZIP67) [5] |
|
|
|
|
|
|
|
| |
2.3.3.4 |
Subfamily: ZNF280-like zinc finger factors |
|
|
| |
2.3.3.4.1 |
ZNF280A (SUHW1, ZNF280, ZNF636) [4] |
|
|
|
|
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|
| |
2.3.3.4.2 |
ZNF280B (SUHW2, ZNF279, ZNF632, Zfp280b, Zfp653) [4] |
|
|
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|
| |
2.3.3.4.3 |
ZNF280C (SUHW3, ZNF633, Zfp280c) [5] |
|
|
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|
| |
2.3.3.4.4 |
ZNF280D (SUHW4, ZNF634, Zfp280d) [5] |
|
|
|
|
|
|
|
| |
2.3.3.4.4.1 |
ZNF280D, isoform 1 |
|
|
|
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|
| |
2.3.3.4.4.2 |
ZNF280D, isoform 2 |
|
|
|
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|
| |
2.3.3.4.4.3 |
ZNF280D, isoform 3 |
|
|
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|
| |
2.3.3.4.4.4 |
ZNF280D, isoform 4 |
|
|
|
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|
| |
2.3.3.4.4.5 |
ZNF280D, isoform 5 |
|
|
|
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|
| |
2.3.3.4.4.6 |
ZNF280D, isoform 6 |
|
|
|
|
|
| |
2.3.3.4.5 |
POGZ (SUHW5, ZNF280E, ZNF635) [9] |
|
|
|
|
|
|
|
| |
2.3.3.4.5.1 |
POGZ, isoform 1 |
|
|
|
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|
| |
2.3.3.4.5.2 |
POGZ, isoform 2 |
|
|
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|
| |
2.3.3.4.5.3 |
POGZ, isoform 3 |
|
|
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|
| |
2.3.3.4.5.4 |
POGZ, isoform 4 |
|
|
|
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|
| |
2.3.3.4.5.5 |
POGZ, isoform 5 (CRA_e) |
|
|
|
|
|
| |
2.3.3.4.5.6 |
POGZ, isoform 6 |
|
|
|
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|
| |
2.3.3.4.5.7 |
POGZ, isoform 7 |
|
|
|
|
|
| |
2.3.3.5 |
Subfamily: ZSCAN5-like zinc finger factors |
|
|
| |
2.3.3.5.1 |
ZSCAN5A (ZNF495) [5] |
|
|
|
|
|
|
|
| |
2.3.3.5.1.1 |
ZSCAN5A, isoform 1 |
|
|
|
|
|
| |
2.3.3.5.1.2 |
ZSCAN5A, isoform 2 |
|
|
|
|
|
| |
2.3.3.5.2 |
ZSCAN5B [5] |
|
|
|
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|
| |
2.3.3.5.3 |
ZSCAN5C [5] |
|
|
|
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|
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|
| |
2.3.3.5.4 |
ZSCAN5D (ZSCAN5DP) [5] |
|
|
|
|
|
|
|
| |
2.3.3.5.5 |
ZSCAN4 (ZNF494) [4] |
 |
|
|
|
|
|
|
| |
2.3.3.6 |
Subfamily: ZNF75-like zinc finger factors |
|
|
| |
2.3.3.6.1 |
ZNF75A [5] |
 |
|
|
|
|
|
|
| |
2.3.3.6.2 |
ZNF75C (ZNF75CP) [5] |
|
|
|
|
|
|
|
| |
2.3.3.6.3 |
ZNF75D (ZNF82) [5] |
|
|
|
|
|
|
|
| |
2.3.3.6.3.1 |
ZNF75D, isoform 1 |
|
|
|
|
|
| |
2.3.3.6.3.2 |
ZNF75D, isoform 2 |
|
|
|
|
|
| |
2.3.3.6.4 |
ZNF213 (ZKSCAN21) [5] |
|
|
|
|
|
|
|
| |
2.3.3.6.4.1 |
ZNF213, isoform 1 |
|
|
|
|
|
| |
2.3.3.6.4.2 |
ZNF213, isoform 2 |
|
|
|
|
|
| |
2.3.3.7 |
Subfamily: ZNF705 factors |
|
|
| |
2.3.3.7.1 |
ZNF705D [3] |
|
|
|
|
|
|
|
| |
2.3.3.7.2 |
ZNF705F [3] |
|
|
|
|
|
|
|
| |
2.3.3.7.3 |
ZNF705G [2] |
|
|
|
|
|
|
|
| |
2.3.3.7.4 |
ZNF705E [2] |
|
|
|
|
|
|
|
| |
2.3.3.8 |
Subfamily: ZBTB7 factors |
GACCCC |
|
| |
2.3.3.8.1 |
ZBTB7A [4] |
 |
|
|
|
|
|
|
| |
2.3.3.8.2 |
ZBTB7B [4] |
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2.3.3.8.2.1 |
ZBTB7B, isoform 1 |
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2.3.3.8.2.2 |
ZBTB7B, isoform 2 |
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2.3.3.8.3 |
ZBTB7C [4] |
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2.3.3.9 |
Subfamily: YY1-like factors |
GCCATCTTG |
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2.3.3.9.1 |
YY1 [4] |
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2.3.3.9.2 |
YY2 (ZNF631) [4] |
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2.3.3.9.3 |
ZFP42 (REX1, ZNF754) [4] |
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2.3.3.10 |
Subfamily: ZNF24-like factors |
TCAT |
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2.3.3.10.1 |
ZNF24 (KOX17, ZNF191, ZSCAN3) [4] |
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2.3.3.10.1.1 |
ZNF24, isoform 1 |
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2.3.3.10.1.2 |
ZNF24, isoform 2 |
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2.3.3.10.2 |
ZNF193 (ZSCAN9) [5] |
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2.3.3.10.2.1 |
ZNF193, isoform 1 |
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2.3.3.10.2.2 |
ZNF193, isoform 2 |
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2.3.3.10.3 |
ZSCAN23 (ZNF390, ZNF453) [5] |
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2.3.3.10.4 |
GLI4 (HKR4) [7] |
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2.3.3.10.5 |
ZNF232 (ZSCAN1) [5] |
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2.3.3.10.5.1 |
ZNF232, isoform long |
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2.3.3.10.5.2 |
ZNF232, isoform short |
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2.3.3.10.6 |
ZKSCAN1 (KOX18, ZNF139, ZNF36) [6] |
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2.3.3.10.7 |
ZNF323 (ZNF310P, ZSCAN31) [6] |
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2.3.3.10.7.1 |
ZNF323, isoform 1 |
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2.3.3.10.7.2 |
ZNF323, isoform 2 |
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2.3.3.11 |
Subfamily: ZBTB6-like factors |
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2.3.3.11.1 |
ZBTB6 (ZID, ZNF482) [4] |
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2.3.3.11.2 |
ZBTB26 (ZNF481) [4] |
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2.3.3.11.3 |
ZBTB12 (NG35) [4] |
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2.3.3.12 |
Subfamily: PRDM1-like factors |
AAGTGAAAGT |
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2.3.3.12.1 |
PRDM1 (BLIMP1) [4] |
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2.3.3.12.1.1 |
PRDM1, isoform 1 |
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2.3.3.12.1.2 |
PRDM1, isoform 2 |
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2.3.3.12.1.3 |
PRDM1, isoform 3 |
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2.3.3.12.2 |
ZNF683 [4] |
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2.3.3.12.2.1 |
ZNF683, isoform 1 |
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2.3.3.12.2.2 |
ZNF683, isoform 2 |
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2.3.3.13 |
Subfamily: ZNF148-like factors |
CACCC |
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2.3.3.13.1 |
ZNF148 (ZBP89) [4] |
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2.3.3.13.1.1 |
ZNF148, isoform 1 |
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2.3.3.13.1.2 |
ZNF148, isoform 2 |
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2.3.3.13.2 |
ZNF281 (GZP1, ZBP99) [4] |
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2.3.3.13.2.1 |
ZNF281, isoform 1 |
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2.3.3.13.2.2 |
ZNF281, isoform 2 |
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2.3.3.14 |
Subfamily: ZBTB20-like factors |
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2.3.3.14.1 |
ZBTB20 (DPZF, ZNF288) [5] |
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2.3.3.14.1.1 |
ZBTB20, isoform 1 |
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2.3.3.14.1.2 |
ZBTB20, isoform 2 |
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2.3.3.14.2 |
ZBTB45 (ZNF499) [4] |
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2.3.3.15 |
Subfamily: ZNF524-like factors |
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2.3.3.15.1 |
ZNF524 [4] |
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2.3.3.15.2 |
ZNF581 [4] |
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2.3.3.16 |
Subfamily: ZNF238-like factors |
AACATCTGGA |
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2.3.3.16.1 |
ZNF238 (RP58, TAZ1, ZBTB18) [4] |
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2.3.3.16.1.1 |
ZNF238, isoform 1 |
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2.3.3.16.1.2 |
ZNF238, isoform 2 |
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2.3.3.16.2 |
ZBTB42 [4] |
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2.3.3.17 |
Subfamily: OVOL-factors |
GCGGGGG |
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2.3.3.17.1 |
OVOL1 [4] |
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2.3.3.17.2 |
OVOL2 (ZNF339) [4] |
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2.3.3.17.2.1 |
OVOL2, isoform 1 |
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2.3.3.17.2.2 |
OVOL2, isoform 2 |
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2.3.3.18 |
Subfamily: ZNF56-like factors |
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2.3.3.18.1 |
ZNF56 (ZNF742) [3] |
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2.3.3.18.2 |
ZNF876P [4] |
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2.3.3.18.3 |
ZNF138 [6] |
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2.3.3.18.3.1 |
ZNF138, isoform 1 |
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2.3.3.18.3.2 |
ZNF138, isoform 2 |
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2.3.3.18.3.3 |
ZNF138, isoform 3 |
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2.3.3.19 |
Subfamily: ZNF500-like factors |
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2.3.3.19.1 |
ZNF500 (ZKSCAN18) [5] |
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2.3.3.19.1.1 |
ZNF500, isoform 1 |
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2.3.3.19.1.2 |
ZNF500, isoform 2 |
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2.3.3.19.2 |
ZNF853 [5] |
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2.3.3.19.3 |
ZKSCAN2 (ZNF694) [6] |
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2.3.3.19.3.1 |
ZKSCAN2, isoform 1 |
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2.3.3.19.3.2 |
ZKSCAN2, isoform 2 |
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2.3.3.19.4 |
ZSCAN29 (ZNF690) [6] |
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2.3.3.19.4.1 |
ZSCAN29, isoform 1 |
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2.3.3.19.4.2 |
ZSCAN29, isoform 2 |
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2.3.3.19.4.3 |
ZSCAN29, isoform 3 |
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2.3.3.19.4.4 |
ZSCAN29, isoform 4 |
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2.3.3.19.5 |
ZNF434 (ZSCAN32) [6] |
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2.3.3.19.5.1 |
ZNF434, isoform 1 |
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2.3.3.19.5.2 |
ZNF434, isoform 2 |
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2.3.3.19.5.3 |
ZNF434, isoform 3 |
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2.3.3.20 |
Subfamily: FEZF factors |
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2.3.3.20.1 |
FEZF1 (ZNF312B) [6] |
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2.3.3.20.1.1 |
FEZF1, isoform 1 |
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2.3.3.20.1.2 |
FEZF1, isoform 2 |
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2.3.3.20.1.3 |
FEZF1, isoform 3 |
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2.3.3.20.2 |
FEZF2 (FEZL, ZNF312) [6] |
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2.3.3.20.2.1 |
FEZF2, isoform 1 |
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2.3.3.20.2.2 |
FEZF2, isoform 2 |
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2.3.3.21 |
Subfamily: GFI1 factors |
AAATCACAGC |
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2.3.3.21.1 |
GFI1 (ZNF163) [6] |
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2.3.3.21.2 |
GFI1B [6] |
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2.3.3.21.2.1 |
GFI1B, isoform 1 |
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2.3.3.21.2.2 |
GFI1B, isoform 2 |
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2.3.3.22 |
Subfamily: BCL6 factors |
CTTTCTAGGAAT |
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2.3.3.22.1 |
BCL6B (BAZF, ZNF62) [5] |
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2.3.3.22.2 |
BCL6 (LAZ3, ZBTB27, ZNF51) [6] |
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2.3.3.22.2.1 |
BCL6, isoform 1 |
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2.3.3.22.2.2 |
BCL6, isoform 2 |
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2.3.3.23 |
Subfamily: ZNF212-like factors |
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2.3.3.23.1 |
ZNF212 (ZNFC150) [4] |
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2.3.3.23.2 |
ZNF777 [6] |
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2.3.3.23.2.1 |
ZNF777, isoform 1 |
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2.3.3.23.2.2 |
ZNF777, isoform 2 |
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2.3.3.23.2.3 |
ZNF777, isoform 3 |
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2.3.3.24 |
Subfamily: MTF1-like factors |
TGCACAC |
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2.3.3.24.1 |
MTF1 [6] |
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2.3.3.24.2 |
ZNF410 (APA1) [5] |
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2.3.3.24.2.1 |
ZNF410, isoform 1 |
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2.3.3.24.2.2 |
ZNF410, isoform 2 |
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2.3.3.24.2.3 |
ZNF410, isoform 3 |
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2.3.3.24.2.4 |
ZNF410, isoform 4 |
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2.3.3.24.2.5 |
ZNF410, isoform 5 |
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2.3.3.25 |
Subfamily: PLAG factors |
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2.3.3.25.1 |
PLAGL2 [6] |
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2.3.3.25.2 |
PLAG1 [7] |
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2.3.3.25.2.1 |
PLAG1, isoform 1 |
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2.3.3.25.2.2 |
PLAG1, isoform 2 |
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2.3.3.25.3 |
PLAGL1 (LOT1, ZAC) [7] |
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2.3.3.25.3.1 |
PLAGL1, isoform 1 |
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2.3.3.25.3.2 |
PLAGL1, isoform 2 (ZACδ2) |
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2.3.3.26 |
Subfamily: ZKSCAN3-like factors |
TGAGGGG |
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2.3.3.26.1 |
ZKSCAN3 (ZFP47, ZNF306, ZNF309, ZSCAN13) [7] |
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2.3.3.26.1.1 |
ZKSCAN3, isoform 1 |
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2.3.3.26.1.2 |
ZKSCAN3, isoform 2 |
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2.3.3.26.2 |
ZKSCAN4 (ZNF307, ZNF427) [7] |
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F |
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2.3.3.27 |
Subfamily: ZNF525-like factors |
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2.3.3.27.1 |
ZNF525 [7] |
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2.3.3.27.2 |
ZNF701 [7] |
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2.3.3.27.2.1 |
ZNF701, isoform 1 |
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2.3.3.27.2.2 |
ZNF701, isoform 2 |
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2.3.3.27.3 |
ZNF765 [11] |
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2.3.3.27.3.1 |
ZNF765, isoform 1 |
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2.3.3.27.3.2 |
ZNF765, isoform 2 |
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2.3.3.27.3.3 |
ZNF765, isoform 3 |
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2.3.3.27.4 |
ZNF468 [11] |
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2.3.3.27.4.1 |
ZNF468, isoform 1 |
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2.3.3.27.4.2 |
ZNF468, isoform 2 |
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2.3.3.28 |
Subfamily: ZNF76-like factors |
CCCATCATGCCTTGC |
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2.3.3.28.1 |
ZNF76 (ZNF523) [7] |
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2.3.3.28.1.1 |
ZNF76, isoform 1 |
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2.3.3.28.1.2 |
ZNF76, isoform 2 |
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2.3.3.28.2 |
ZNF143 (SBF, STAF) [7] |
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2.3.3.28.2.1 |
ZNF143, isoform 1 |
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2.3.3.28.2.2 |
ZNF143, isoform 2 |
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2.3.3.28.2.3 |
ZNF143, isoform 3 |
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2.3.3.29 |
Subfamily: ZNF652-like factors |
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2.3.3.29.1 |
ZNF652 (ZFP652) [9] |
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2.3.3.29.2 |
ZBTB47 (ZNF651) [9] |
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F |
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2.3.3.29.2.1 |
ZBTB47, isoform 1 |
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2.3.3.29.2.2 |
ZBTB47, isoform 2 |
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2.3.3.30 |
Subfamily: ZNF350-like factors |
TGGgttCAGactTTG |
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| |
2.3.3.30.1 |
ZNF350 (ZBRK1) [8] |
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2.3.3.30.2 |
ZNF577 [8] |
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2.3.3.30.2.1 |
ZNF577, isoform 1 |
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2.3.3.30.2.2 |
ZNF577, isoform 2 |
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2.3.3.30.3 |
ZNF649 [10] |
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2.3.3.30.4 |
ZNF613 [12] |
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2.3.3.30.4.1 |
ZNF613, isoform 1 |
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2.3.3.30.4.2 |
ZNF613, isoform 2 |
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2.3.3.30.5 |
ZNF614 [12] |
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2.3.3.30.5.1 |
ZNF614, isoform 1 |
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2.3.3.30.5.2 |
ZNF614, isoform 2 |
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2.3.3.31 |
Subfamily: ZNF642-like factors |
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| |
2.3.3.31.1 |
ZNF642 (ZFP69) [9] |
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2.3.3.31.2 |
ZNF643 (ZFP69B) [9] |
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2.3.3.31.2.1 |
ZNF643, isoform 1 |
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2.3.3.31.2.2 |
ZNF643, isoform 2 |
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2.3.3.31.3 |
ZNF570 [11] |
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2.3.3.31.3.1 |
ZNF570, isoform 1 |
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2.3.3.31.3.2 |
ZNF570, isoform 2 |
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2.3.3.31.4 |
ZNF583 [12] |
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2.3.3.32 |
Subfamily: ZNF679-like factors |
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| |
2.3.3.32.1 |
ZNF679 [9] |
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2.3.3.32.2 |
ZNF735 [9] |
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2.3.3.33 |
Subfamily: ZNF763-like factors |
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| |
2.3.3.33.1 |
ZNF763 [8] |
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| |
2.3.3.33.1.1 |
ZNF763, isoform 1 |
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2.3.3.33.1.2 |
ZNF763, isoform 2 |
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2.3.3.33.1.3 |
ZNF763, isoform 3 |
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2.3.3.33.2 |
ZNF844 [9] |
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2.3.3.33.3 |
ZNF625 [9] |
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2.3.3.33.3.1 |
ZNF625, isoform 1 |
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2.3.3.33.3.2 |
ZNF625, isoform 2 |
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2.3.3.33.4 |
ZNF669 [9] |
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2.3.3.33.4.1 |
ZNF669, isoform 1 |
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2.3.3.33.4.2 |
ZNF669, isoform 2 |
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2.3.3.33.5 |
ZNF670 [9] |
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2.3.3.33.6 |
ZNF124 (HZF-16) [8] |
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2.3.3.33.6.1 |
ZNF124, isoform 1 |
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2.3.3.33.6.2 |
ZNF124, isoform 2 |
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2.3.3.33.6.3 |
ZNF124, isoform 3 (HZF-16.2) |
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2.3.3.33.6.4 |
ZNF124, isoform 4 (HZF-16.1) |
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2.3.3.33.6.5 |
ZNF124, isoform 5 (HZF-16.1) |
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2.3.3.33.7 |
ZNF627 [11] |
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2.3.3.33.8 |
ZNF439 [11] |
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2.3.3.33.9 |
ZNF440 [12] |
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2.3.3.33.10 |
ZNF77 [12] |
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2.3.3.33.11 |
ZNF490 [13] |
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2.3.3.33.12 |
ZNF563 [12] |
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2.3.3.33.12.1 |
ZNF563, isoform 1 |
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2.3.3.33.12.2 |
ZNF563, isoform 2 |
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2.3.3.33.13 |
ZNF57 (ZNF424) [13] |
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2.3.3.33.14 |
ZNF69 [14] |
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2.3.3.33.14.1 |
ZNF69, isoform 1 |
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2.3.3.33.14.2 |
ZNF69, isoform 2 |
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2.3.3.33.15 |
ZNF136 [14] |
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2.3.3.33.16 |
ZNF564 [15] |
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2.3.3.33.17 |
ZNF20 (KOX13) [15] |
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2.3.3.33.18 |
ZNF878 [15] |
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2.3.3.33.19 |
ZNF555 [15] |
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2.3.3.33.19.1 |
ZNF555, isoform 1 |
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2.3.3.33.19.2 |
ZNF555, isoform 2 |
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2.3.3.33.19.3 |
ZNF555, isoform 3 |
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2.3.3.34 |
Subfamily: ZNF3-like factors |
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2.3.3.34.1 |
ZNF3 (KOX25) [8] |
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2.3.3.34.1.1 |
ZNF3, isoform 1 |
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2.3.3.34.1.2 |
ZNF3, isoform 2 |
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2.3.3.34.2 |
ZNF397 (ZSCAN15) [9] |
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2.3.3.34.2.1 |
ZNF397, isoform 1 (ZNF397-fu) |
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2.3.3.34.2.2 |
ZNF397, isoform 2 |
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2.3.3.34.2.3 |
ZNF397, isoform 3 (ZNF397-nf) |
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2.3.3.35 |
Subfamily: ZNF620-like factors |
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2.3.3.35.1 |
ZNF620 [8] |
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2.3.3.35.1.1 |
ZNF620, isoform 1 |
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2.3.3.35.1.2 |
ZNF620, isoform 2 |
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2.3.3.35.2 |
ZNF621 [7] |
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2.3.3.35.2.1 |
ZNF621, isoform 1 |
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2.3.3.35.2.2 |
ZNF621, isoform 2 |
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2.3.3.35.3 |
ZNF566 [8] |
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2.3.3.35.3.1 |
ZNF566, isoform 1 |
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2.3.3.35.3.2 |
ZNF566, isoform 2 |
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2.3.3.35.4 |
ZNF619 [10] |
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2.3.3.35.4.1 |
ZNF619, isoform 1 |
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2.3.3.35.4.2 |
ZNF619, isoform 2 |
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2.3.3.35.4.3 |
ZNF619, isoform 3 |
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2.3.3.35.4.4 |
ZNF619, isoform 4 |
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2.3.3.35.5 |
ZNF383 [11] |
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2.3.3.35.6 |
ZNF829 [10] |
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2.3.3.35.6.1 |
ZNF829, isoform 1 |
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2.3.3.35.6.2 |
ZNF829, isoform 2 |
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2.3.3.35.6.3 |
ZNF829, isoform 3 |
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2.3.3.35.7 |
ZNF582 [10] |
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2.3.3.36 |
Subfamily: ZNF324 factors |
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2.3.3.36.1 |
ZNF324A [9] |
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2.3.3.36.2 |
ZNF324B [9] |
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2.3.3.36.2.1 |
ZNF324B, isoform 1 |
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2.3.3.36.2.2 |
ZNF324B, isoform 2 |
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2.3.3.37 |
Subfamily: ZNF362-like factors |
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2.3.3.37.1 |
ZNF362 [6] |
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2.3.3.37.2 |
ZNF384 (CAGH1, CIZ, NMP4, TNRC1) [8] |
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2.3.3.37.2.1 |
ZNF384, isoform 1 |
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2.3.3.37.2.2 |
ZNF384, isoform 2 |
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2.3.3.37.2.3 |
ZNF384, isoform 3 |
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2.3.3.38 |
Subfamily: ZNF282-like factors |
TCCACCCC |
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2.3.3.38.1 |
ZNF282 (HUB1) [5] |
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2.3.3.38.1.1 |
ZNF282, isoform 1 |
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2.3.3.38.1.2 |
ZNF282, isoform 2 |
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2.3.3.38.2 |
ZNF398 (ZER6) [9] |
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2.3.3.38.2.1 |
ZNF398, isoform 1 (p71) |
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2.3.3.38.2.2 |
ZNF398, isoform 2 (p52) |
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2.3.3.39 |
Subfamily: ZNF764-like factors |
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2.3.3.39.1 |
ZNF764 [7] |
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2.3.3.39.1.1 |
ZNF764, isoform 1 |
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2.3.3.39.1.2 |
ZNF764, isoform 2 |
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2.3.3.39.2 |
ZNF785 [7] |
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2.3.3.39.2.1 |
ZNF785, isoform 1 |
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2.3.3.39.2.2 |
ZNF785, isoform 2 |
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2.3.3.39.3 |
ZNF771 [8] |
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2.3.3.40 |
Subfamily: ZNF177-like factors |
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2.3.3.40.1 |
ZNF177 [7] |
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2.3.3.40.1.1 |
ZNF177, isoform 1 |
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2.3.3.40.1.2 |
ZNF177, isoform 2 |
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2.3.3.40.1.3 |
ZNF177, isoform 3 |
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2.3.3.40.2 |
ZNF891 [8] |
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2.3.3.40.3 |
ZNF333 [10] |
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2.3.3.40.3.1 |
ZNF333, isoform 1 |
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2.3.3.40.3.2 |
ZNF333, isoform 2 |
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2.3.3.40.3.3 |
ZNF333, isoform 3 |
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2.3.3.41 |
Subfamily: ZNF32-like factors |
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2.3.3.41.1 |
ZNF32 (KOX30, Zfp637) [7] |
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2.3.3.41.2 |
ZIK1 (ZNF762) [9] |
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2.3.3.41.2.1 |
ZIK1, isoform 1 |
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2.3.3.41.2.2 |
ZIK1, isoform 2 |
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2.3.3.41.2.3 |
ZIK1, isoform 3 |
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2.3.3.42 |
Subfamily: ZNF773-like factors |
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2.3.3.42.1 |
ZNF773 (ZNF419B) [9] |
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2.3.3.42.1.1 |
ZNF773, isoform 1 |
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2.3.3.42.1.2 |
ZNF773, isoform 2 |
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2.3.3.42.2 |
ZNF419 (ZNF419A) [11] |
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2.3.3.42.2.1 |
ZNF419, isoform 1 |
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2.3.3.42.2.2 |
ZNF419, isoform 2 |
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2.3.3.42.2.3 |
ZNF419, isoform 3 |
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2.3.3.42.2.4 |
ZNF419, isoform 4 |
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2.3.3.42.2.5 |
ZNF419, isoform 5 |
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2.3.3.42.2.6 |
ZNF419, isoform 6 |
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2.3.3.43 |
Subfamily: ZNF558-like factors |
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2.3.3.43.1 |
ZNF558 [9] |
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2.3.3.43.1.1 |
ZNF558, isoform 1 |
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2.3.3.43.1.2 |
ZNF558, isoform 2 |
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2.3.3.43.2 |
ZNF557 [10] |
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2.3.3.43.2.1 |
ZNF557, isoform 1 |
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2.3.3.43.2.2 |
ZNF557, isoform 2 |
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2.3.3.44 |
Subfamily: ZNF302-like factors |
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2.3.3.44.1 |
ZNF302 (ZNF135L, ZNF140L, ZNF327) [7] |
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2.3.3.44.1.1 |
ZNF302, isoform 1 |
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2.3.3.44.1.2 |
ZNF302, isoform 2 |
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2.3.3.44.2 |
ZNF2 (ZNF661) [9] |
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2.3.3.44.2.1 |
ZNF2, isoform 1 |
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2.3.3.44.2.2 |
ZNF2, isoform 2 |
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2.3.3.44.2.3 |
ZNF2, isoform 3 |
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2.3.3.44.2.4 |
ZNF2, isoform 4 |
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2.3.3.44.3 |
ZNF181 [11] |
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2.3.3.44.3.1 |
ZNF181, isoform 1 |
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2.3.3.44.3.2 |
ZNF181, isoform 2 |
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2.3.3.44.3.3 |
ZNF181, isoform 3 |
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2.3.3.44.4 |
ZNF140 [10] |
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2.3.3.44.4.1 |
ZNF140, isoform 1 |
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2.3.3.44.4.2 |
ZNF140, isoform 2 |
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2.3.3.45 |
Subfamily: ZNF562-like factors |
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2.3.3.45.1 |
ZNF562 [8] |
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2.3.3.45.1.1 |
ZNF562, isoform 1 |
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2.3.3.45.1.2 |
ZNF562, isoform 2 |
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2.3.3.45.3 |
ZNF561 [12] |
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2.3.3.45.3.1 |
ZNF561, isoform 1 |
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2.3.3.45.3.2 |
ZNF561, isoform 2 |
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2.3.3.45.4 |
ZNF559 [13] |
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2.3.3.45.4.1 |
ZNF559, isoform 1 |
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2.3.3.45.4.2 |
ZNF559, isoform 2 |
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2.3.3.45.5 |
ZNF846 [14] |
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2.3.3.45.5.1 |
ZNF846, isoform 1 |
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2.3.3.45.5.2 |
ZNF846, isoform 2 |
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2.3.3.46 |
Subfamily: ZXD-factors |
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2.3.3.46.1 |
ZXDA [10] |
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