|
TCF4_1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
TCF4 |
1 |
4738 |
8284 |
2128 |
5185 |
|
TF group |
bHLH |
2 |
7822 |
2465 |
9640 |
409 |
|
Polypeptide used |
DBD |
3 |
6 |
20335 |
0 |
13 |
|
Ligand sequence |
TGCGAA20NGA |
4 |
20335 |
0 |
0 |
0 |
|
Batch of SELEX experiment |
W |
5 |
0 |
20335 |
2315 |
1334 |
|
Seed sequence |
NNCACCTGNN |
6 |
56 |
20335 |
387 |
0 |
|
Hamming distance of sequences to seed |
1 |
7 |
117 |
0 |
0 |
20335 |
|
SELEX cycle |
2 |
8 |
27 |
5 |
20335 |
25 |
|
Number of repeats |
dimeric |
9 |
374 |
7336 |
6324 |
6301 |
|
Comment |
|
10 |
5305 |
4812 |
4838 |
5380 |
|
Representative matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
TCF4_2 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
TCF4 |
1 |
182 |
211 |
81 |
163 |
|
TF group |
bHLH |
2 |
259 |
122 |
200 |
55 |
|
Polypeptide used |
full |
3 |
24 |
638 |
41 |
0 |
|
Ligand sequence |
TTGCCG20NCCT |
4 |
638 |
37 |
7 |
155 |
|
Batch of SELEX experiment |
AE |
5 |
0 |
638 |
49 |
53 |
|
Seed sequence |
NNCACCTGNN |
6 |
79 |
638 |
39 |
64 |
|
Hamming distance of sequences to seed |
1 |
7 |
0 |
57 |
0 |
638 |
|
SELEX cycle |
2 |
8 |
101 |
295 |
638 |
182 |
|
Number of repeats |
dimeric |
9 |
66 |
213 |
158 |
201 |
|
Comment |
|
10 |
197 |
123 |
144 |
174 |
|
Representative matrix |
yes |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |