TCF4_1

 

 

 

 

A

C

G

T

 

Name

TCF4

1

4738

8284

2128

5185

 

TF group

bHLH

2

7822

2465

9640

409

 

Polypeptide used

DBD

3

6

20335

0

13

 

Ligand sequence

TGCGAA20NGA

4

20335

0

0

0

 

Batch of SELEX experiment

W

5

0

20335

2315

1334

 

Seed sequence

NNCACCTGNN

6

56

20335

387

0

 

Hamming distance of sequences to seed

1

7

117

0

0

20335

 

SELEX cycle

2

8

27

5

20335

25

 

Number of repeats

dimeric

9

374

7336

6324

6301

 

Comment

 

10

5305

4812

4838

5380

 

Representative matrix

no

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

TCF4_2

 

 

 

 

A

C

G

T

 

Name

TCF4

1

182

211

81

163

 

TF group

bHLH

2

259

122

200

55

 

Polypeptide used

full

3

24

638

41

0

 

Ligand sequence

TTGCCG20NCCT

4

638

37

7

155

 

Batch of SELEX experiment

AE

5

0

638

49

53

 

Seed sequence

NNCACCTGNN

6

79

638

39

64

 

Hamming distance of sequences to seed

1

7

0

57

0

638

 

SELEX cycle

2

8

101

295

638

182

 

Number of repeats

dimeric

9

66

213

158

201

 

Comment

 

10

197

123

144

174

 

Representative matrix

yes

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764