|
TBR1_1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
TBR1 |
1 |
34509 |
359 |
3329 |
1433 |
|
TF group |
TBX |
2 |
6880 |
3255 |
34509 |
4480 |
|
Polypeptide used |
DBD |
3 |
70 |
254 |
34509 |
213 |
|
Ligand sequence |
TCACAC20NACA |
4 |
39 |
1759 |
88 |
34509 |
|
Batch of SELEX experiment |
Z |
5 |
0 |
6 |
34509 |
4 |
|
Seed sequence |
AGGTGTGANN |
6 |
2386 |
4742 |
157 |
34509 |
|
Hamming distance of sequences to seed |
1 |
7 |
1175 |
2551 |
34509 |
7001 |
|
SELEX cycle |
3 |
8 |
34509 |
90 |
584 |
205 |
|
Number of repeats |
monomeric |
9 |
25869 |
2575 |
1488 |
4576 |
|
Comment |
|
10 |
18507 |
5619 |
4537 |
5846 |
|
Representative matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
TBR1_2 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
TBR1 |
1 |
1957 |
202 |
790 |
434 |
|
TF group |
TBX |
2 |
3383 |
3 |
127 |
54 |
|
Polypeptide used |
full |
3 |
208 |
22 |
3383 |
100 |
|
Ligand sequence |
TTGCAC20NACT |
4 |
0 |
3 |
3383 |
0 |
|
Batch of SELEX experiment |
AE |
5 |
0 |
46 |
24 |
3383 |
|
Seed sequence |
NAGGTGTGAAN |
6 |
0 |
0 |
3383 |
0 |
|
Hamming distance of sequences to seed |
1 |
7 |
37 |
158 |
17 |
3383 |
|
SELEX cycle |
4 |
8 |
64 |
99 |
3383 |
142 |
|
Number of repeats |
monomeric |
9 |
3383 |
0 |
23 |
20 |
|
Comment |
|
10 |
3383 |
100 |
28 |
506 |
|
Representative
matrix |
no |
11 |
2164 |
547 |
163 |
510 |
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |