|
SP8 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
SP8 |
1 |
52 |
27 |
78 |
10 |
|
TF group |
C2H2 |
2 |
54 |
113 |
0 |
4 |
|
Polypeptide used |
DBD |
3 |
25 |
167 |
0 |
13 |
|
Ligand sequence |
TGCTCG20NCTC |
4 |
133 |
33 |
1 |
2 |
|
Batch of SELEX experiment |
Y |
5 |
7 |
167 |
1 |
5 |
|
Seed sequence |
NMCMCGCCCMCN |
6 |
25 |
37 |
167 |
39 |
|
Hamming distance of sequences to seed |
1 |
7 |
5 |
167 |
6 |
2 |
|
SELEX cycle |
4 |
8 |
2 |
167 |
3 |
0 |
|
Number of repeats |
monomeric |
9 |
0 |
167 |
4 |
15 |
|
Comment |
|
10 |
90 |
77 |
6 |
3 |
|
Representative
matrix |
no |
11 |
13 |
167 |
21 |
39 |
|
Source: |
|
12 |
31 |
52 |
1 |
82 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |