|
TFEC |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
TFEC |
1 |
45 |
12 |
29 |
0 |
|
TF group |
bHLH |
2 |
25 |
24 |
34 |
74 |
|
Polypeptide used |
DBD |
3 |
1 |
74 |
0 |
0 |
|
Ligand sequence |
TAGTGG20NGTT |
4 |
74 |
0 |
0 |
1 |
|
Batch of SELEX experiment |
AF |
5 |
1 |
74 |
8 |
13 |
|
Seed sequence |
RTCACGTGAY |
6 |
39 |
2 |
74 |
0 |
|
Hamming distance of sequences to seed |
1 |
7 |
8 |
8 |
4 |
74 |
|
SELEX cycle |
4 |
8 |
0 |
0 |
74 |
0 |
|
Number of repeats |
dimeric |
9 |
74 |
15 |
15 |
3 |
|
Comment |
< 100 counts |
10 |
0 |
37 |
22 |
36 |
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |