|
TBX15_d1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
TBX15 |
1 |
3013 |
1 |
150 |
158 |
|
TF group |
TBX |
2 |
49 |
112 |
4299 |
158 |
|
Polypeptide used |
DBD |
3 |
0 |
7 |
4230 |
6 |
|
Ligand sequence |
TACGTC40NTGC |
4 |
14 |
117 |
58 |
3788 |
|
Batch of SELEX experiment |
AI |
5 |
1 |
0 |
4633 |
0 |
|
Seed sequence |
AGGTGTGAANTTCACACCT |
6 |
210 |
142 |
18 |
3887 |
|
Hamming distance of sequences to seed |
2 |
7 |
49 |
217 |
4195 |
628 |
|
SELEX cycle |
4 |
8 |
3033 |
0 |
6 |
0 |
|
Number of repeats |
dimeric |
9 |
2868 |
62 |
5 |
453 |
|
Comment |
|
10 |
2412 |
5 |
464 |
378 |
|
Representative matrix |
yes |
11 |
139 |
15 |
185 |
3896 |
|
|
|
12 |
1 |
0 |
5 |
3919 |
|
|
|
13 |
146 |
2496 |
141 |
110 |
|
|
|
14 |
2951 |
18 |
92 |
5 |
|
|
|
15 |
1 |
2593 |
2 |
0 |
|
|
|
16 |
2996 |
6 |
4 |
0 |
|
|
|
17 |
7 |
2524 |
0 |
0 |
|
Source: |
|
18 |
4 |
2523 |
0 |
20 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
19 |
99 |
158 |
8 |
3900 |
|
|
|
|
|
|
|
|
|
|
|
|
TBX15_m1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
TBX15 |
1 |
10502 |
74 |
664 |
112 |
|
TF group |
TBX |
2 |
458 |
101 |
10502 |
103 |
|
Polypeptide used |
DBD |
3 |
19 |
7 |
10502 |
0 |
|
Ligand sequence |
TACGTC40NTGC |
4 |
61 |
175 |
245 |
10502 |
|
Batch of SELEX experiment |
AI |
5 |
0 |
8 |
10502 |
0 |
|
Seed sequence |
AGGTGTGA |
6 |
140 |
435 |
324 |
10502 |
|
Hamming distance of sequences to seed |
1 |
7 |
44 |
454 |
10502 |
937 |
|
SELEX cycle |
4 |
8 |
10502 |
71 |
306 |
96 |
|
Number of repeats |
monomeric |
|
|
|
|
|
|
Comment |
|
|
|
|
|
|
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |