|
NKX3-2 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
NKX3-2 |
1 |
2202 |
1032 |
1611 |
867 |
|
TF group |
homeodomain |
2 |
1715 |
5712 |
2832 |
615 |
|
Polypeptide used |
DBD |
3 |
21 |
5712 |
18 |
488 |
|
Ligand sequence |
TCCAGT20NGAC |
4 |
5712 |
105 |
49 |
272 |
|
Batch of SELEX experiment |
Y |
5 |
170 |
5712 |
26 |
27 |
|
Seed sequence |
NCCACTTAA |
6 |
5 |
36 |
25 |
5712 |
|
Hamming distance of sequences to seed |
1 |
7 |
26 |
197 |
0 |
5712 |
|
SELEX cycle |
3 |
8 |
5712 |
357 |
173 |
761 |
|
Number of repeats |
monomeric |
9 |
5712 |
1339 |
2456 |
1876 |
|
Comment |
|
|
|
|
|
|
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
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|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |