|
ETV6_d1 |
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|
A |
C |
G |
T |
|
Name |
ETV6 |
1 |
496 |
3347 |
875 |
373 |
|
TF group |
ETS |
2 |
758 |
4186 |
274 |
189 |
|
Polypeptide used |
full |
3 |
39 |
78 |
2663 |
61 |
|
Ligand sequence |
TGAGTG20NGA |
4 |
133 |
121 |
2682 |
43 |
|
Batch of SELEX experiment |
AF |
5 |
3611 |
12 |
22 |
44 |
|
Seed sequence |
CCGGAASCGGAAGTN |
6 |
3599 |
72 |
34 |
18 |
|
Hamming distance of sequences to seed |
2 |
7 |
346 |
1320 |
1640 |
2 |
|
SELEX cycle |
3 |
8 |
110 |
4209 |
11 |
303 |
|
Number of repeats |
dimeric |
9 |
15 |
1 |
2656 |
1 |
|
Comment |
|
10 |
2 |
1 |
2657 |
0 |
|
Representative matrix |
yes |
11 |
3644 |
3 |
69 |
7 |
|
|
|
12 |
3668 |
10 |
6 |
7 |
|
|
|
13 |
300 |
51 |
2565 |
4 |
|
Source: |
|
14 |
15 |
1151 |
56 |
2360 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
15 |
1076 |
360 |
1413 |
245 |
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|
ETV6_m1 |
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|||
|
A |
C |
G |
T |
|
Name |
ETV6 |
1 |
9414 |
6562 |
4684 |
2002 |
|
TF group |
ETS |
2 |
342 |
2394 |
4292 |
441 |
|
Polypeptide used |
full |
3 |
1476 |
6379 |
397 |
308 |
|
Ligand sequence |
TGAGTG20NGA |
4 |
7 |
0 |
6687 |
13 |
|
Batch of SELEX experiment |
AF |
5 |
21 |
0 |
6687 |
22 |
|
Seed sequence |
KSYGGAAGTN |
6 |
6687 |
0 |
7 |
0 |
|
Hamming distance of sequences to seed |
1 |
7 |
6687 |
13 |
32 |
41 |
|
SELEX cycle |
3 |
8 |
768 |
52 |
6687 |
0 |
|
Number of repeats |
monomeric |
9 |
184 |
834 |
233 |
6687 |
|
Comment |
|
10 |
2049 |
342 |
3205 |
1091 |
|
Representative
matrix |
no |
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |