ZNF740_1

 

 

 

 

A

C

G

T

 

Name

ZNF740

1

589

995

382

185

 

TF group

C2H2

2

196

2151

27

145

 

Polypeptide used

DBD

3

146

2151

7

49

 

Ligand sequence

TGGTCT20NCTT

4

21

2151

8

34

 

Batch of SELEX experiment

Y

5

20

2151

12

33

 

Seed sequence

NCCCCCCCAC

6

8

2151

21

30

 

Hamming distance of sequences to seed

1

7

53

2151

38

23

 

SELEX cycle

4

8

108

2151

23

104

 

Number of repeats

monomeric

9

2151

587

114

310

 

Comment

 

10

433

2151

184

708

 

Representative matrix

no

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

 

ZNF740_2

 

 

 

 

A

C

G

T

 

Name

ZNF740

1

1077

3104

873

384

 

TF group

C2H2

2

130

5438

20

78

 

Polypeptide used

full

3

64

5438

59

93

 

Ligand sequence

TGTGAG20NGA

4

78

5438

61

65

 

Batch of SELEX experiment

AE

5

308

5438

175

185

 

Seed sequence

NCCCCCCCAC

6

34

5438

42

33

 

Hamming distance of sequences to seed

1

7

50

5438

8

65

 

SELEX cycle

4

8

96

5438

71

328

 

Number of repeats

monomeric

9

5438

526

530

991

 

Comment

 

10

603

5438

269

1710

 

Representative matrix

no

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

 

 

 

 

 

 

 

 

Znf740_3

 

 

 

 

A

C

G

T

 

Name

Zfp740

1

806

909

590

354

 

TF group

C2H2

2

699

2659

105

297

 

Polypeptide used

DBD

3

582

2659

23

166

 

Ligand sequence

TCAACC20NCG

4

136

2659

24

74

 

Batch of SELEX experiment

Z

5

110

2659

8

91

 

Seed sequence

NCCCCCCCAC

6

190

2659

41

144

 

Hamming distance of sequences to seed

1

7

235

2659

120

139

 

SELEX cycle

3

8

390

2659

107

280

 

Number of repeats

monomeric

9

2659

416

277

611

 

Comment

 

10

811

2659

352

1162

 

Representative matrix

yes

 

 

 

 

 

 

Source:

 

 

 

 

 

 

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764