|
TFCP2_d1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
TFCP2 |
1 |
339 |
61 |
129 |
47 |
|
TF group |
CP2 |
2 |
575 |
6 |
24 |
32 |
|
Polypeptide used |
full |
3 |
575 |
2 |
8 |
102 |
|
Ligand sequence |
TAGATA20NCG |
4 |
1 |
575 |
2 |
0 |
|
Batch of SELEX experiment |
AD |
5 |
5 |
575 |
1 |
119 |
|
Seed sequence |
NAACCGGTTN |
6 |
129 |
3 |
575 |
7 |
|
Hamming distance of sequences to seed |
1 |
7 |
1 |
9 |
575 |
1 |
|
SELEX cycle |
4 |
8 |
189 |
35 |
0 |
575 |
|
Number of repeats |
dimeric |
9 |
46 |
60 |
20 |
575 |
|
Comment |
|
10 |
96 |
196 |
31 |
252 |
|
Representative matrix |
no |
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
TFCP2_dd1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
TFCP2 |
1 |
418 |
0 |
30 |
172 |
|
TF group |
CP2 |
2 |
0 |
382 |
11 |
0 |
|
Polypeptide used |
full |
3 |
4 |
368 |
2 |
98 |
|
Ligand sequence |
TAGATA20NCG |
4 |
125 |
0 |
859 |
32 |
|
Batch of SELEX experiment |
AD |
5 |
0 |
0 |
905 |
3 |
|
Seed sequence |
NCCGGNNNNNNCCGGN |
6 |
195 |
41 |
4 |
404 |
|
Hamming distance of sequences to seed |
2 |
7 |
160 |
24 |
16 |
486 |
|
SELEX cycle |
4 |
8 |
83 |
154 |
73 |
281 |
|
Number of repeats |
dimer of dimers |
9 |
336 |
68 |
138 |
84 |
|
Comment |
|
10 |
444 |
30 |
86 |
42 |
|
Representative matrix |
yes |
11 |
424 |
16 |
87 |
108 |
|
|
|
12 |
20 |
373 |
47 |
30 |
|
|
|
13 |
41 |
319 |
23 |
223 |
|
|
|
14 |
184 |
27 |
790 |
101 |
|
Source: |
|
15 |
62 |
62 |
892 |
51 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
16 |
173 |
60 |
26 |
379 |
|
|
|