|
EGR4 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
EGR4 |
1 |
1167 |
1459 |
1004 |
1953 |
|
TF group |
C2H2 |
2 |
1143 |
1664 |
527 |
2131 |
|
Polypeptide used |
DBD |
3 |
2745 |
1924 |
151 |
158 |
|
Ligand sequence |
TAGCGA40NGCT |
4 |
101 |
4466 |
150 |
319 |
|
Batch of SELEX experiment |
AI |
5 |
556 |
475 |
7053 |
707 |
|
Seed sequence |
NNMCGCCCACGCANNN |
6 |
11 |
4447 |
63 |
88 |
|
Hamming distance of sequences to seed |
2 |
7 |
120 |
4448 |
107 |
76 |
|
SELEX cycle |
4 |
8 |
0 |
4403 |
110 |
131 |
|
Number of repeats |
monomeric |
9 |
4500 |
1055 |
348 |
363 |
|
Comment |
|
10 |
44 |
4402 |
114 |
245 |
|
Representative
matrix |
no |
11 |
233 |
1793 |
6862 |
253 |
|
|
|
12 |
10 |
4354 |
183 |
219 |
|
|
|
13 |
4608 |
839 |
829 |
483 |
|
|
|
14 |
1721 |
1399 |
409 |
1778 |
|
Source: |
|
15 |
1483 |
819 |
655 |
2762 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
16 |
1191 |
1118 |
935 |
2422 |
|
|
|