|
DLX1_1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
DLX1 |
1 |
2123 |
2825 |
1814 |
1519 |
|
TF group |
homeodomain |
2 |
2584 |
2795 |
1592 |
1311 |
|
Polypeptide used |
DBD |
3 |
2295 |
2753 |
149 |
5528 |
|
Ligand sequence |
TCTTGA20NGA |
4 |
8281 |
861 |
416 |
347 |
|
Batch of SELEX experiment |
AC |
5 |
8281 |
105 |
42 |
535 |
|
Seed sequence |
NNYAATTANN |
6 |
1002 |
41 |
49 |
8281 |
|
Hamming distance of sequences to seed |
1 |
7 |
157 |
359 |
511 |
8281 |
|
SELEX cycle |
4 |
8 |
8281 |
103 |
36 |
1910 |
|
Number of repeats |
monomeric |
9 |
1774 |
1894 |
2077 |
2536 |
|
Comment |
|
10 |
1613 |
3126 |
1893 |
1648 |
|
Representative matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
Dlx1_2 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
Dlx1 |
1 |
2349 |
2754 |
2631 |
1663 |
|
TF group |
homeodomain |
2 |
550 |
5131 |
113 |
4266 |
|
Polypeptide used |
DBD |
3 |
9397 |
788 |
533 |
665 |
|
Ligand sequence |
TGAGAT20NCG |
4 |
9397 |
522 |
105 |
236 |
|
Batch of SELEX experiment |
P |
5 |
1 |
49 |
24 |
9397 |
|
Seed sequence |
NYAATTAN |
6 |
285 |
725 |
278 |
9397 |
|
Hamming distance of sequences to seed |
1 |
7 |
9397 |
144 |
79 |
702 |
|
SELEX cycle |
2 |
8 |
2499 |
2830 |
1758 |
2311 |
|
Number of repeats |
monomeric |
|
|
|
|
|
|
Comment |
|
|
|
|
|
|
|
Representative
matrix |
yes |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |