|
|
ZNF435 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ZNF435 |
|
1 |
40 |
9 |
8 |
8 |
|
TF group |
C2H2 |
|
2 |
15 |
4 |
40 |
10 |
|
Polypeptide used |
full |
|
3 |
0 |
3 |
0 |
59 |
|
Ligand sequence |
TATTTA20NTTG |
|
4 |
0 |
0 |
59 |
0 |
|
Batch of SELEX experiment |
W |
|
5 |
0 |
0 |
0 |
59 |
|
Seed sequence |
AGTGTTAACAGARCACCT |
|
6 |
0 |
0 |
0 |
59 |
|
Hamming distance of sequences to seed |
3 |
|
7 |
50 |
0 |
11 |
3 |
|
SELEX cycle |
4 |
|
8 |
60 |
0 |
0 |
4 |
|
Number of repeats |
dimeric |
|
9 |
0 |
59 |
0 |
0 |
|
Comment |
possibly partial; < 100 counts |
|
10 |
52 |
1 |
0 |
16 |
|
Representative matrix |
yes |
|
11 |
1 |
0 |
56 |
0 |
|
|
|
|
12 |
59 |
0 |
0 |
0 |
|
|
|
|
13 |
47 |
0 |
12 |
0 |
|
|
|
|
14 |
0 |
59 |
0 |
0 |
|
|
|
|
15 |
59 |
3 |
0 |
0 |
|
|
|
|
16 |
0 |
59 |
0 |
1 |
|
Source: |
|
|
17 |
0 |
52 |
2 |
5 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
18 |
1 |
14 |
4 |
40 |
|
|
|