|
TEAD3_d1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
TEAD3 |
1 |
16860 |
677 |
15141 |
1367 |
|
TF group |
TEA |
2 |
5256 |
28914 |
1128 |
115 |
|
Polypeptide used |
DBD |
3 |
30189 |
88 |
929 |
57 |
|
Ligand sequence |
TATAAG40NAAG |
4 |
121 |
97 |
153 |
38017 |
|
Batch of SELEX experiment |
AI |
5 |
7276 |
155 |
2750 |
34132 |
|
Seed sequence |
RCATTCCNNRCATTCCN |
6 |
635 |
30279 |
1420 |
843 |
|
Hamming distance of sequences to seed |
2 |
7 |
647 |
27679 |
616 |
9589 |
|
SELEX cycle |
3 |
8 |
11510 |
2131 |
6560 |
13474 |
|
Number of repeats |
dimeric |
9 |
8280 |
9539 |
5952 |
8955 |
|
Comment |
|
10 |
15266 |
916 |
16297 |
6480 |
|
Representative matrix |
no |
11 |
7218 |
27620 |
2711 |
60 |
|
|
|
12 |
30740 |
101 |
1296 |
55 |
|
|
|
13 |
149 |
92 |
130 |
37160 |
|
|
|
14 |
14810 |
185 |
4094 |
28849 |
|
|
|
15 |
1257 |
30131 |
1568 |
1092 |
|
Source: |
|
16 |
722 |
28607 |
331 |
5632 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
17 |
13099 |
2255 |
8297 |
9814 |
|
|
|
|
|
|
|
|
|
|
|
|
TEAD3_m1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
TEAD3 |
1 |
12530 |
66 |
8913 |
1109 |
|
TF group |
TEA |
2 |
2524 |
18920 |
441 |
0 |
|
Polypeptide used |
DBD |
3 |
21444 |
0 |
0 |
0 |
|
Ligand sequence |
TATAAG40NAAG |
4 |
0 |
0 |
0 |
21444 |
|
Batch of SELEX experiment |
AI |
5 |
4566 |
23 |
969 |
16878 |
|
Seed sequence |
RMATWCCA |
6 |
0 |
21444 |
0 |
0 |
|
Hamming distance of sequences to seed |
1 |
7 |
0 |
21444 |
0 |
4 |
|
SELEX cycle |
3 |
8 |
21444 |
1039 |
8654 |
13663 |
|
Number of repeats |
monomeric |
|
|
|
|
|
|
Comment |
|
|
|
|
|
|
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |