|
ZNF282 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
ZNF282 |
1 |
21 |
196 |
50 |
45 |
|
TF group |
C2H2 |
2 |
39 |
21 |
7 |
378 |
|
Polypeptide used |
DBD |
3 |
16 |
0 |
8 |
387 |
|
Ligand sequence |
TGCCTG20NGA |
4 |
3 |
2 |
3 |
380 |
|
Batch of SELEX experiment |
AC |
5 |
0 |
209 |
2 |
0 |
|
Seed sequence |
CTTTCCCMYAACACKNN |
6 |
0 |
208 |
0 |
1 |
|
Hamming distance of sequences to seed |
2 |
7 |
0 |
205 |
3 |
2 |
|
SELEX cycle |
4 |
8 |
140 |
99 |
0 |
21 |
|
Number of repeats |
monomeric |
9 |
12 |
132 |
2 |
126 |
|
Comment |
possibly partial |
10 |
256 |
3 |
37 |
61 |
|
Representative matrix |
yes |
11 |
277 |
0 |
0 |
2 |
|
|
|
12 |
2 |
210 |
4 |
3 |
|
|
|
13 |
242 |
44 |
2 |
7 |
|
|
|
14 |
1 |
210 |
2 |
2 |
|
|
|
15 |
14 |
0 |
297 |
129 |
|
Source: |
|
16 |
157 |
40 |
60 |
43 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
17 |
44 |
98 |
97 |
51 |
|
|
|