|
TP63 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
TP63 |
1 |
1586 |
26 |
997 |
115 |
|
TF group |
p53l |
2 |
2261 |
1 |
185 |
21 |
|
Polypeptide used |
DBD |
3 |
0 |
2533 |
0 |
0 |
|
Ligand sequence |
TTCCTT20NGA |
4 |
2246 |
0 |
76 |
4 |
|
Batch of SELEX experiment |
R |
5 |
692 |
33 |
0 |
2353 |
|
Seed sequence |
RACATGTYNNRACATGTC |
6 |
0 |
0 |
4021 |
0 |
|
Hamming distance of sequences to seed |
2 |
7 |
14 |
85 |
0 |
3025 |
|
SELEX cycle |
3 |
8 |
97 |
1025 |
26 |
1961 |
|
Number of repeats |
dimeric |
9 |
649 |
478 |
2070 |
13 |
|
Comment |
|
10 |
112 |
681 |
1656 |
829 |
|
Representative
matrix |
no |
11 |
993 |
1 |
2132 |
47 |
|
|
|
12 |
2192 |
0 |
48 |
45 |
|
|
|
13 |
0 |
2788 |
0 |
0 |
|
|
|
14 |
2151 |
0 |
1 |
192 |
|
|
|
15 |
75 |
617 |
8 |
2823 |
|
|
|
16 |
0 |
0 |
3532 |
0 |
|
Source: |
|
17 |
49 |
202 |
1 |
3126 |
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|
18 |
701 |
2099 |
198 |
606 |
|
|
|