GLI2_1

 

 

 

 

A

C

G

T

 

Name

GLI2

1

493

514

8874

1138

 

TF group

C2H2

2

8874

2471

1540

16

 

Polypeptide used

DBD

3

366

8874

16

79

 

Ligand sequence

TAAGTA40NTGA

4

20

8874

25

26

 

Batch of SELEX experiment

AI

5

8874

1040

642

1034

 

Seed sequence

GACCACMCACNNNG

6

27

8874

17

2

 

Hamming distance of sequences to seed

1

7

2879

5995

41

13

 

SELEX cycle

3

8

951

8874

177

1193

 

Number of repeats

monomeric

9

8874

201

1575

267

 

Comment

 

10

3084

8874

2189

2103

 

Representative matrix

yes

11

2751

1627

3679

818

 

 

 

12

3073

1286

2058

2457

 

Source:

 

13

2434

3219

1040

2181

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764

14

1913

3195

8874

2154

 

 

 

 

 

 

 

 

 

 

 

 

GLI2_2

 

 

 

 

A

C

G

T

 

Name

GLI2

1

348

184

1437

203

 

TF group

C2H2

2

128

1437

116

83

 

Polypeptide used

DBD

3

16

10

1437

36

 

Ligand sequence

TAAGTA40NTGA

4

1437

148

29

15

 

Batch of SELEX experiment

AI

5

6

1437

6

8

 

Seed sequence

GCGACCACNCTG

6

0

1437

8

4

 

Hamming distance of sequences to seed

1

7

1437

21

6

14

 

SELEX cycle

3

8

5

1437

9

5

 

Number of repeats

monomeric

9

709

386

233

109

 

Comment

 

10

314

1437

92

137

 

Representative matrix

yes

11

671

117

215

1437

 

Source:

 

12

843

221

1437

308

 

Jolma et al., Cell 152:327-339 (2013); PubMed 23332764