|
PHOX2A |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
PHOX2A |
1 |
2164 |
1240 |
497 |
11434 |
|
TF group |
homeodomain |
2 |
11434 |
225 |
1539 |
1001 |
|
Polypeptide used |
DBD |
3 |
11434 |
0 |
34 |
5 |
|
Ligand sequence |
TGACTC20NGA |
4 |
1362 |
4424 |
629 |
11434 |
|
Batch of SELEX experiment |
Y |
5 |
639 |
5304 |
2300 |
6130 |
|
Seed sequence |
TAATYYAATTA |
6 |
1262 |
4580 |
806 |
6855 |
|
Hamming distance of sequences to seed |
1 |
7 |
11434 |
717 |
1896 |
437 |
|
SELEX cycle |
3 |
8 |
11434 |
199 |
309 |
132 |
|
Number of repeats |
dimeric |
9 |
0 |
10 |
2 |
11434 |
|
Comment |
|
10 |
1135 |
778 |
81 |
11434 |
|
Representative
matrix |
no |
11 |
11434 |
229 |
816 |
1657 |
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |