|
SCRT1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
SCRT1 |
1 |
472 |
167 |
574 |
111 |
|
TF group |
C2H2 |
2 |
452 |
203 |
89 |
410 |
|
Polypeptide used |
DBD |
3 |
30 |
40 |
1400 |
519 |
|
Ligand sequence |
TCTTAG20NATG |
4 |
7 |
1447 |
3 |
20 |
|
Batch of SELEX experiment |
Y |
5 |
1046 |
35 |
0 |
24 |
|
Seed sequence |
NNGCAACAGGTGGNN |
6 |
1071 |
0 |
0 |
0 |
|
Hamming distance of sequences to seed |
2 |
7 |
1 |
1501 |
0 |
0 |
|
SELEX cycle |
4 |
8 |
1075 |
0 |
0 |
0 |
|
Number of repeats |
monomeric |
9 |
190 |
3 |
1461 |
5 |
|
Comment |
|
10 |
0 |
0 |
1629 |
2 |
|
Representative
matrix |
yes |
11 |
0 |
3 |
2 |
1136 |
|
|
|
12 |
154 |
42 |
1302 |
255 |
|
|
|
13 |
139 |
217 |
1034 |
502 |
|
Source: |
|
14 |
187 |
302 |
298 |
467 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
15 |
269 |
317 |
118 |
524 |
|
|
|