|
|
ZNF232 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ZNF232 |
|
1 |
81 |
27 |
78 |
22 |
|
TF group |
C2H2 |
|
2 |
25 |
23 |
31 |
149 |
|
Polypeptide used |
full |
|
3 |
0 |
0 |
193 |
0 |
|
Ligand sequence |
TATCAT20NACG |
|
4 |
4 |
9 |
0 |
186 |
|
Batch of SELEX experiment |
W |
|
5 |
29 |
34 |
0 |
162 |
|
Seed sequence |
RTGTTAAAYGTAGATTAAG |
|
6 |
146 |
2 |
0 |
0 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
145 |
6 |
0 |
10 |
|
SELEX cycle |
4 |
|
8 |
149 |
4 |
0 |
2 |
|
Number of repeats |
monomeric |
|
9 |
11 |
63 |
11 |
93 |
|
Comment |
possibly partial |
|
10 |
8 |
0 |
191 |
0 |
|
Representative matrix |
yes |
|
11 |
2 |
2 |
0 |
176 |
|
|
|
|
12 |
142 |
0 |
67 |
22 |
|
|
|
|
13 |
10 |
0 |
185 |
0 |
|
|
|
|
14 |
158 |
0 |
0 |
0 |
|
|
|
|
15 |
0 |
36 |
0 |
168 |
|
|
|
|
16 |
2 |
15 |
28 |
175 |
|
|
|
|
17 |
158 |
6 |
5 |
12 |
|
Source: |
|
|
18 |
159 |
0 |
0 |
0 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
19 |
30 |
55 |
165 |
2 |
|
|
|