|
PAX7_1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
PAX7 |
1 |
1341 |
374 |
447 |
2694 |
|
TF group |
PAX |
2 |
2694 |
47 |
92 |
22 |
|
Polypeptide used |
DBD |
3 |
2694 |
3 |
0 |
12 |
|
Ligand sequence |
TCCAAC20NAAC |
4 |
32 |
153 |
23 |
2694 |
|
Batch of SELEX experiment |
Y |
5 |
6 |
1688 |
111 |
1005 |
|
Seed sequence |
TAATYRATTA |
6 |
1128 |
93 |
1566 |
4 |
|
Hamming distance of sequences to seed |
1 |
7 |
2694 |
23 |
82 |
4 |
|
SELEX cycle |
2 |
8 |
22 |
9 |
2 |
2694 |
|
Number of repeats |
dimeric |
9 |
26 |
80 |
43 |
2694 |
|
Comment |
|
10 |
2694 |
232 |
265 |
700 |
|
Representative matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
PAX7_2 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
PAX7 |
1 |
679 |
68 |
98 |
3708 |
|
TF group |
PAX |
2 |
3708 |
18 |
16 |
6 |
|
Polypeptide used |
full |
3 |
3708 |
3 |
0 |
0 |
|
Ligand sequence |
TAGGGC20NGGT |
4 |
6 |
21 |
3 |
3708 |
|
Batch of SELEX experiment |
AE |
5 |
10 |
2934 |
24 |
774 |
|
Seed sequence |
TAATYRATTA |
6 |
1135 |
27 |
2573 |
0 |
|
Hamming distance of sequences to seed |
1 |
7 |
3708 |
0 |
10 |
10 |
|
SELEX cycle |
3 |
8 |
12 |
0 |
0 |
3708 |
|
Number of repeats |
dimeric |
9 |
21 |
25 |
9 |
3708 |
|
Comment |
|
10 |
3708 |
72 |
47 |
249 |
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |