|
|
ZBTB49 |
|
|
|
|||
|
|
A |
C |
G |
T |
|
Name |
ZBTB49 |
|
1 |
0 |
131 |
0 |
2367 |
|
TF group |
C2H2 |
|
2 |
0 |
0 |
0 |
3038 |
|
Polypeptide used |
DBD |
|
3 |
402 |
1179 |
486 |
2525 |
|
Ligand sequence |
TCTAAT20NGA |
|
4 |
4 |
2523 |
14 |
941 |
|
Batch of SELEX experiment |
AC |
|
5 |
41 |
20 |
3253 |
48 |
|
Seed sequence |
TTTCGCNTGGCNNGTCA |
|
6 |
0 |
3283 |
0 |
1 |
|
Hamming distance of sequences to seed |
2 |
|
7 |
9 |
1100 |
286 |
837 |
|
SELEX cycle |
4 |
|
8 |
37 |
14 |
173 |
2641 |
|
Number of repeats |
monomeric |
|
9 |
55 |
2 |
3620 |
16 |
|
Comment |
possibly partial |
|
10 |
1116 |
205 |
3547 |
310 |
|
Representative matrix |
yes |
|
11 |
289 |
3489 |
172 |
218 |
|
|
|
|
12 |
1270 |
907 |
627 |
8 |
|
|
|
|
13 |
0 |
916 |
883 |
364 |
|
|
|
|
14 |
6 |
0 |
3347 |
0 |
|
|
|
|
15 |
0 |
113 |
5 |
2716 |
|
Source: |
|
|
16 |
0 |
3066 |
0 |
0 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
17 |
2320 |
3 |
219 |
410 |
|
|
|