|
POU2F2_m1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
POU2F2 |
1 |
3616 |
946 |
1853 |
2908 |
|
TF group |
POU |
2 |
984 |
1941 |
642 |
9324 |
|
Polypeptide used |
DBD |
3 |
9324 |
23 |
78 |
97 |
|
Ligand sequence |
TGACAG20NGA |
4 |
242 |
525 |
246 |
9324 |
|
Batch of SELEX experiment |
AC |
5 |
225 |
107 |
9324 |
1366 |
|
Seed sequence |
NTATGCWAATN |
6 |
361 |
9324 |
1433 |
3215 |
|
Hamming distance of sequences to seed |
1 |
7 |
6074 |
64 |
90 |
3250 |
|
SELEX cycle |
2 |
8 |
9324 |
128 |
1065 |
918 |
|
Number of repeats |
monomeric |
9 |
9324 |
70 |
134 |
253 |
|
Comment |
|
10 |
1580 |
569 |
946 |
9324 |
|
Representative matrix |
no |
11 |
1736 |
1629 |
2430 |
3528 |
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
POU2F2_d1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
POU2F2 |
1 |
531 |
619 |
198 |
574 |
|
TF group |
POU |
2 |
1217 |
446 |
174 |
706 |
|
Polypeptide used |
DBD |
3 |
411 |
296 |
92 |
1923 |
|
Ligand sequence |
TGACAG20NGA |
4 |
650 |
175 |
1273 |
253 |
|
Batch of SELEX experiment |
AC |
5 |
926 |
997 |
42 |
82 |
|
Seed sequence |
NWTRMATATKYAWN |
6 |
1923 |
158 |
96 |
369 |
|
Hamming distance of sequences to seed |
1 |
7 |
141 |
77 |
32 |
1923 |
|
SELEX cycle |
2 |
8 |
1923 |
35 |
17 |
141 |
|
Number of repeats |
dimeric |
9 |
536 |
193 |
106 |
1923 |
|
Comment |
|
10 |
150 |
72 |
969 |
953 |
|
Representative
matrix |
no |
11 |
244 |
1565 |
86 |
358 |
|
|
|
12 |
1923 |
203 |
139 |
301 |
|
Source: |
|
13 |
1072 |
339 |
260 |
851 |
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |
|
14 |
853 |
359 |
308 |
404 |
|
|
|
|
|
|
|
|
|
|
|
|
Pou2f2_d2 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
Pou2f2 |
1 |
1663 |
2440 |
688 |
4416 |
|
TF group |
POU |
2 |
5950 |
935 |
964 |
3257 |
|
Polypeptide used |
DBD |
3 |
1084 |
546 |
554 |
9207 |
|
Ligand sequence |
TAGATA20NTAT |
4 |
587 |
69 |
8620 |
150 |
|
Batch of SELEX experiment |
Z |
5 |
6874 |
2333 |
32 |
38 |
|
Seed sequence |
NWTRMATATKYAWN |
6 |
9207 |
35 |
50 |
172 |
|
Hamming distance of sequences to seed |
1 |
7 |
265 |
24 |
7 |
9207 |
|
SELEX cycle |
3 |
8 |
9207 |
30 |
21 |
285 |
|
Number of repeats |
dimeric |
9 |
192 |
32 |
23 |
9207 |
|
Comment |
|
10 |
27 |
31 |
3990 |
5217 |
|
Representative matrix |
no |
11 |
106 |
8822 |
52 |
385 |
|
|
|
12 |
9207 |
402 |
265 |
572 |
|
Source: |
|
13 |
5029 |
985 |
770 |
4178 |
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
14 |
5864 |
570 |
1858 |
915 |
|
|
|
|
|
|
|
|
|
|
|
|
Pou2f2_m2 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
Pou2f2 |
1 |
171 |
277 |
73 |
15896 |
|
TF group |
POU |
2 |
15896 |
1 |
10 |
7 |
|
Polypeptide used |
DBD |
3 |
27 |
38 |
2 |
15896 |
|
Ligand sequence |
TAGATA20NTAT |
4 |
24 |
13 |
15896 |
1718 |
|
Batch of SELEX experiment |
Z |
5 |
13 |
15896 |
30 |
1408 |
|
Seed sequence |
TATGCAAAT |
6 |
15896 |
9 |
74 |
3514 |
|
Hamming distance of sequences to seed |
1 |
7 |
15896 |
321 |
378 |
1398 |
|
SELEX cycle |
3 |
8 |
15896 |
46 |
94 |
185 |
|
Number of repeats |
monomeric |
9 |
1526 |
311 |
366 |
15896 |
|
Comment |
|
|
|
|
|
|
|
Representative
matrix |
no |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et
al., Cell 152:327-339 (2013); PubMed 23332764 |