|
GATA3_1 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
GATA3 |
1 |
943 |
433 |
143 |
494 |
|
TF group |
GATA |
2 |
0 |
0 |
943 |
0 |
|
Polypeptide used |
DBD |
3 |
943 |
0 |
0 |
0 |
|
Ligand sequence |
TGTCGT20NGA |
4 |
0 |
0 |
0 |
943 |
|
Batch of SELEX experiment |
AC |
5 |
943 |
66 |
47 |
158 |
|
Seed sequence |
AGATAANN |
6 |
943 |
176 |
253 |
157 |
|
Hamming distance of sequences to seed |
1 |
7 |
136 |
284 |
427 |
96 |
|
SELEX cycle |
2 |
8 |
350 |
198 |
292 |
103 |
|
Number of repeats |
monomeric |
|
|
|
|
|
|
Comment |
|
|
|
|
|
|
|
Representative matrix |
yes |
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |
|
|
|
|
|
|
|
|
|
|
GATA3_2 |
|
|
|
|||
|
A |
C |
G |
T |
|
Name |
GATA3 |
1 |
2295 |
976 |
278 |
1355 |
|
TF group |
GATA |
2 |
70 |
0 |
2295 |
14 |
|
Polypeptide used |
full |
3 |
2295 |
30 |
0 |
86 |
|
Ligand sequence |
TCATGC20NCG |
4 |
108 |
0 |
95 |
2295 |
|
Batch of SELEX experiment |
AC |
5 |
2295 |
76 |
110 |
385 |
|
Seed sequence |
AGATAANN |
6 |
2295 |
238 |
481 |
345 |
|
Hamming distance of sequences to seed |
1 |
7 |
379 |
731 |
977 |
208 |
|
SELEX cycle |
2 |
8 |
733 |
507 |
803 |
252 |
|
Number of repeats |
monomeric |
|
|
|
|
|
|
Comment |
|
|
|
|
|
|
|
Representative
matrix |
no |
|
|
|
|
|
|
Source: |
|
|
|
|
|
|
|
Jolma et al., Cell 152:327-339 (2013); PubMed 23332764 |