Genes categorization

Genes functional annotation

Identification of the enriched Gene Ontology (GO) categories, pathways, or diseases in your gene set

 

This service is available for the following categories:

Gene Ontology

  • biological process
  • cellular component
  • molecular function

TRANSPATH® pathways

Reactome pathways

HumanCyc pathways

HumanPSD™ diseases

 

Example visualizations:

 

Biological processes to which genes from your input gene set belong to can be visualised by us in a tree map or table view:

GO Biological processes

 

GO Biological processes table

 

Signaling pathways in which genes from your gene set are involved can be visualised by us in a graphical or table view:

Pathways

 

Pathways table view

 

Human diseases biomarkers of which are enriched in your gene set can be visualised by us in a graphical or table view.

Diseases

 

Diseases table view

 

Want to see how all these visualizations can be integrated into one analysis pipeline starting from target genes identification out of raw omics data and ending with identified master regulators of the studied process? Check out this demo report constructed on the basis of RNA-seq data analysis (raw *.fast files) taken from GSE32424 dataset on Esophageal Squamous Cell Carcinoma:

 

Esophageal Squamous Cell Carcinoma (GSE32424) — Transcriptomics, FASTQ

 

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