Discover with precision
Apply high-quality knowledge of diseases, drugs, pathways, and gene regulation.
Get two real ovarian cancer reports linking multi-omics data to mechanisms, drug targets and therapies.
Start with what you want to do
Pick your goal — we’ll point you to the right way in.
TRANSFAC Workspace
Run your own analyses in one integrated workspace — from transcription factor binding sites and signaling networks to disease mechanisms, biomarkers and drug targets. No coding required.
TRANSFAC Expert
Work with a geneXplain scientist to turn your data into mechanistic insight, prioritized candidates, and testable hypotheses.
TRANSFAC Knowledge Graph
License 38+ years of curated biology as data — grounded, literature-traceable knowledge to train and validate your own AI models.
Specialist databases
Purpose-built resources for chemistry and enzymes.
Chemo-Informatics (PASS, PHARMAEXPERT)
Predict the biological activity of chemical compounds with the structure–activity relationship (SAR) approach, then analyze activity networks and drug interactions.
BRENDA
The most comprehensive enzyme database, powered by an industry-standard systems-biology platform — master the enzymes and metabolites.
Our partners
Additional project partners
Partner names are presented at organization level and reflect the information available on the cited pages at the time of review.
Mediomics
Testimonials
“GeneXplain’s databases and software tools are very helpful for our research. The training program is absolutely amazing. It clearly shows to my students how to maximize results of analysis of our omics data! They can learn all the steps of the analysis — from raw data preprocessing to unraveling the hidden molecular mechanisms behind the pathology we’re studying.”
Dr. Sudipto Das
Lecturer, Pharmacy and Biomolecular Sciences · Royal College of Surgeons in Ireland (RCSI)
“I used geneXplain software and databases in several projects to map our genomics, transcriptomics, and proteomics data onto affected pathways and master regulators. It was very helpful for interpretation of our results. GeneXplain team was always very responsive to our requests to customize workflows!”
VP
Victor P. Andreev, PhD, DSc
Senior Research Scientist, Arbor Research Collaborative for Health · Ann Arbor, Michigan, USA
“The geneXplain “Click and Run” bioinformatics approach is absolutely perfect for my needs! I’ve discovered how to uncover the biological significance hidden within my data.”
Maria Smetanina
Baylor College of Medicine · Houston, Texas, USA
