TRANSFAC features and packages
Explore the functionality behind the available TRANSFAC packages
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Select your TRANSFAC
online license
Biggest collection of transcription factors, their DNA binding models, and genes bound by them, in
a user-friendly interface
Prediction of TFBS in eukaryotic species, with a focus on human, mouse, rat, yeast, and plants,
using portal interface
Prediction of human TFBS using classic Match and MATCH Suite tools
Advanced tools for prediction of TFBS and their combinations on genomic scale using Machine Learning and AI methods
Over 200 pipelines and tools for bioinformatics analysis and modeling of NGS, RNA-seq, epigenomics, proteomics, and metabolomics data
Application Programming Interface (API) including Java-based API, R-based API, Jupiter notebook
Signal transduction and metabolic pathways, individual reactions with experimental details, protein-protein interactions (PPIs) and post-translational modifications (PTMs)
Integrated pathway visualization and modification tool
Gene-Disease-Drug-Clinical Trial assignments, disease biomarkers, drug targets, drug-disease approval status, functional classification tools
Upstream Analysis – integrated promoter and pathway analysis for identification of prospective drug targets and biomarkers
Disease molecular mechanism reconstruction and identification of prospective drug targets and treatments using a fully automatized pipeline for multi-omics data processing
TRANSFAC
TRANSFAC 2.0 including
MATCH Suite
TRANSFAC with geneXplain platform
TRANSFAC 2.0 including
MATCH Suite, and the geneXplain platform
All databases with geneXplain platform
TRANSFAC 2.0 including
MATCH Suite, and HumanPSD + TRANSPATH, and the geneXplain platform
Full package
TRANSFAC 2.0 including
MATCH Suite, and HumanPSD + TRANSPATH, and the geneXplain platform, and Genome Enhancer
Join our recurrent online Q&A sessions “Coffee break with TRANSFAC” where you can ask any question regarding TRANSFAC applications and provided solutions.
