Videos
TRANSFAC® intro video – this video is a general introduction to the online TRANSFAC® database. It shows how to operate in the basic interface and perform searches in the TRANSFAC® database.
Introduction to Match™ video – this video shows how to perform search for putative transcription factor binding sites in the TRANSFAC® database by using the Match™ tool.
Match™ Tool in TRANSFAC® Interface video – this video demonstrates how Match™ tool for transcription factor binding site prediction can be launched from the TRANSFAC® interface.
The Match™ tool can be launched starting from:
– a list of genes
– a list of transcripts
– DNA sequences in a FASTA format
– genomic intervals in BED format
FMatch Tool in TRANSFAC® Interface video – this video demonstrates how FMatch analysis can be launched from TRANSFAC® interface.
Fmatch is a tool that searches for enriched binding sites in a set of promoters versus a background set.
The analysis can be launched starting from:
– a list of genes
– a list of transcripts
– DNA sequences in a FASTA format
– genomic intervals in BED format
