Videos

TRANSFAC® intro video – this video is a general introduction to the online TRANSFAC® database. It shows how to operate in the basic interface and perform searches in the TRANSFAC® database.

Introduction to Match™ video – this video shows how to perform search for putative transcription factor binding sites in the TRANSFAC® database by using the Match™ tool.

Match™ Tool in TRANSFAC® Interface video – this video demonstrates how Match™ tool for transcription factor binding site prediction can be launched from the TRANSFAC® interface.

The Match™ tool can be launched starting from:

– a list of genes

– a list of transcripts

– DNA sequences in a FASTA format

– genomic intervals in BED format

FMatch Tool in TRANSFAC® Interface video – this video demonstrates how FMatch analysis can be launched from TRANSFAC® interface.

Fmatch is a tool that searches for enriched binding sites in a set of promoters versus a background set.

The analysis can be launched starting from:

– a list of genes

– a list of transcripts

– DNA sequences in a FASTA format

– genomic intervals in BED format

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